Search of human proteins with 7657033

Search of human proteins with 7657033

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7657033 5',3'-nucleotidase, cytosolic [Homo sapiens]
         (201 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7657033 5',3'-nucleotidase, cytosolic [Homo sapiens]               417   e-117
gi|9910372 5',3'-nucleotidase, mitochondrial precursor [Homo sap...   260   5e-70
gi|222136632 NFKB inhibitor interacting Ras-like 2 isoform c [Ho...    28   4.0  
gi|118402590 myosin XV [Homo sapiens]                                  27   9.0  
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]        27   9.0  
gi|189217888 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...    27   9.0  
gi|189217886 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...    27   9.0  
gi|20127609 carbohydrate (N-acetylgalactosamine 4-0) sulfotransf...    27   9.0  
gi|19923790 rab3 GTPase-activating protein, non-catalytic subuni...    27   9.0  

>gi|7657033 5',3'-nucleotidase, cytosolic [Homo sapiens]
          Length = 201

 Score =  417 bits (1072), Expect = e-117
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MARSVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRALRPDLADK 60
           MARSVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRALRPDLADK
Sbjct: 1   MARSVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRALRPDLADK 60

Query: 61  VASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWVEQHL 120
           VASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWVEQHL
Sbjct: 61  VASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWVEQHL 120

Query: 121 GPQFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRL 180
           GPQFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRL
Sbjct: 121 GPQFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRL 180

Query: 181 LSWSDNWREILDSKRGAAQRE 201
           LSWSDNWREILDSKRGAAQRE
Sbjct: 181 LSWSDNWREILDSKRGAAQRE 201


>gi|9910372 5',3'-nucleotidase, mitochondrial precursor [Homo
           sapiens]
          Length = 228

 Score =  260 bits (665), Expect = 5e-70
 Identities = 119/193 (61%), Positives = 150/193 (77%)

Query: 3   RSVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRALRPDLADKVA 62
           R++RVLVDMDGVLADFE G LR FR RFP++P + LE RRGF   EQY  LRP L++K  
Sbjct: 34  RALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAI 93

Query: 63  SVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWVEQHLGP 122
           S++E+  FF +LEP+PGA++AV+EM  L +T VFICTSP+  + +C  EKY WVE++ GP
Sbjct: 94  SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGP 153

Query: 123 QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLS 182
            F+E+I+LTRDKTVV  DLLIDD+  + G E TPSWEH+LFT CHN+HL L P RRRL S
Sbjct: 154 DFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHS 213

Query: 183 WSDNWREILDSKR 195
           W+D+W+ ILDSKR
Sbjct: 214 WADDWKAILDSKR 226


>gi|222136632 NFKB inhibitor interacting Ras-like 2 isoform c [Homo
           sapiens]
          Length = 97

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/45 (35%), Positives = 20/45 (44%)

Query: 140 DLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWS 184
           D+ +   +T RG  E  +        C  R L  P TRRR  SWS
Sbjct: 41  DIYVGSIETDRGVREQIAESLFSVWSCSRRRLTNPRTRRRSPSWS 85


>gi|118402590 myosin XV [Homo sapiens]
          Length = 3530

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 5/40 (12%)

Query: 23   LRGF--RRRFPEEPH--VPLEQR-RGFLAREQYRALRPDL 57
            LRGF  +RRF    H  + L+ R RG+LAR++Y+ +R  L
Sbjct: 1913 LRGFFIKRRFRSLRHKIILLQSRARGYLARQRYQQMRRSL 1952


>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
          Length = 4857

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 116  VEQHLGPQFVERIILTRDKTVVLGDLLIDD------KDTVRGQEETPSWEHILFTCCHN 168
            + +H  PQ   ++ +T D    +   L +       KD + G E  P W  +LF  CH+
Sbjct: 3664 LRRHHVPQQCNKMPITADLVAPILRFLTEVGNSHIMKDWLGGSEVNPLWTALLFLLCHS 3722


>gi|189217888 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 14  VLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRAL----RPDLADKVASVYEAPG 69
           V  D  +G  RG     P++P  PL++      R++ R L     P  A   A+  +AP 
Sbjct: 75  VTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAP- 133

Query: 70  FFLDLEPIPGALD 82
               + P PG LD
Sbjct: 134 ---FIRPGPGTLD 143


>gi|189217886 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 14  VLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRAL----RPDLADKVASVYEAPG 69
           V  D  +G  RG     P++P  PL++      R++ R L     P  A   A+  +AP 
Sbjct: 75  VTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAP- 133

Query: 70  FFLDLEPIPGALD 82
               + P PG LD
Sbjct: 134 ---FIRPGPGTLD 143


>gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 14  VLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRAL----RPDLADKVASVYEAPG 69
           V  D  +G  RG     P++P  PL++      R++ R L     P  A   A+  +AP 
Sbjct: 75  VTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAP- 133

Query: 70  FFLDLEPIPGALD 82
               + P PG LD
Sbjct: 134 ---FIRPGPGTLD 143


>gi|19923790 rab3 GTPase-activating protein, non-catalytic subunit
            [Homo sapiens]
          Length = 1393

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 107  HCVGEKYRWVEQHLGPQFVERIILTRDKTVVLGDLLI 143
            H VGE Y +   HLG    E I+   DK V+   LL+
Sbjct: 1273 HYVGELYNYGVDHLGE---EAILQVHDKEVLASQLLV 1306


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.142    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,385,231
Number of Sequences: 37866
Number of extensions: 381185
Number of successful extensions: 918
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 916
Number of HSP's gapped (non-prelim): 9
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.