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Search of human proteins with 13654274
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13654274 fumarylacetoacetate hydrolase domain containing 1
isoform 2 [Homo sapiens]
(224 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13654274 fumarylacetoacetate hydrolase domain containing 1 is... 459 e-129
gi|215422413 fumarylacetoacetate hydrolase domain containing 1 i... 435 e-122
gi|66348062 fumarylacetoacetate hydrolase domain containing 1 is... 435 e-122
gi|156231349 fumarylacetoacetate hydrolase domain containing 2A ... 146 2e-35
gi|40786394 fumarylacetoacetate hydrolase domain containing 2B [... 144 6e-35
gi|4885503 myosin IA [Homo sapiens] 30 2.2
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens] 28 4.9
gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo... 28 8.3
gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo... 28 8.3
gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo s... 28 8.3
gi|219555700 leucine rich repeat containing 27 isoform a [Homo s... 28 8.3
gi|55741567 leucine rich repeat containing 27 isoform a [Homo sa... 28 8.3
>gi|13654274 fumarylacetoacetate hydrolase domain containing 1
isoform 2 [Homo sapiens]
Length = 224
Score = 459 bits (1180), Expect = e-129
Identities = 224/224 (100%), Positives = 224/224 (100%)
Query: 1 MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL 60
MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL
Sbjct: 1 MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL 60
Query: 61 MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT 120
MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT
Sbjct: 61 MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT 120
Query: 121 LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII 180
LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII
Sbjct: 121 LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII 180
Query: 181 TLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVEKPEY 224
TLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVEKPEY
Sbjct: 181 TLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVEKPEY 224
>gi|215422413 fumarylacetoacetate hydrolase domain containing 1
isoform 3 [Homo sapiens]
Length = 226
Score = 435 bits (1118), Expect = e-122
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL 60
MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL
Sbjct: 1 MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL 60
Query: 61 MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT 120
MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT
Sbjct: 61 MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT 120
Query: 121 LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII 180
LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII
Sbjct: 121 LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII 180
Query: 181 TLEEGDIILTGTPKGVGPVKENDEIEAGIHGL 212
TLEEGDIILTGTPKGVGPVKENDEIEAGIHGL
Sbjct: 181 TLEEGDIILTGTPKGVGPVKENDEIEAGIHGL 212
>gi|66348062 fumarylacetoacetate hydrolase domain containing 1
isoform 1 [Homo sapiens]
Length = 248
Score = 435 bits (1118), Expect = e-122
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL 60
MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL
Sbjct: 1 MGIMAASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL 60
Query: 61 MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT 120
MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT
Sbjct: 61 MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWT 120
Query: 121 LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII 180
LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII
Sbjct: 121 LAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKII 180
Query: 181 TLEEGDIILTGTPKGVGPVKENDEIEAGIHGL 212
TLEEGDIILTGTPKGVGPVKENDEIEAGIHGL
Sbjct: 181 TLEEGDIILTGTPKGVGPVKENDEIEAGIHGL 212
>gi|156231349 fumarylacetoacetate hydrolase domain containing 2A
[Homo sapiens]
Length = 314
Score = 146 bits (368), Expect = 2e-35
Identities = 79/208 (37%), Positives = 123/208 (59%), Gaps = 10/208 (4%)
Query: 20 IVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELGVVMG 79
+VCVG NY DH +E V EP++F K +++ +++P ++ + E+EL VV+G
Sbjct: 108 VVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDEVVLPPQSQEVDWEVELAVVIG 167
Query: 80 KRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVS-AFVPKE 138
K+ + + AM +V G+ + D++ARD Q ++ G W L K+F CP+ A V K+
Sbjct: 168 KKGKHIKATDAMAHVAGFTVAHDVSARDWQ--MRRNGKQWLLGKTFDTFCPLGPALVTKD 225
Query: 139 KIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG- 197
+ DPH LK+ +VNGE+ Q G T+ M+F +I++VS+ +T GD+ILTGTP GVG
Sbjct: 226 SVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFVTFYPGDVILTGTPPGVGV 285
Query: 198 ----PV--KENDEIEAGIHGLVSMTFKV 219
PV K+ DE++ I L + KV
Sbjct: 286 FRKPPVFLKKGDEVQCEIEELGVIINKV 313
>gi|40786394 fumarylacetoacetate hydrolase domain containing 2B
[Homo sapiens]
Length = 314
Score = 144 bits (363), Expect = 6e-35
Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 10/212 (4%)
Query: 16 WGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELG 75
W +VCVG NY DH +E V EP++F K +++ +++P ++ + E+EL
Sbjct: 104 WPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDEVVLPPQSQEVDWEVELA 163
Query: 76 VVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVS-AF 134
VV+GK+ + + AM +V G+ + D++ARD ++ G W L K+F CP+ A
Sbjct: 164 VVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWLT--RRNGKQWLLGKTFDTFCPLGPAL 221
Query: 135 VPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPK 194
V K+ + DPH LK+ +VNGE+ Q T+ M+F +I++VS+ +T GD+ILTGTP
Sbjct: 222 VTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQFVTFYPGDVILTGTPP 281
Query: 195 GVG-----PV--KENDEIEAGIHGLVSMTFKV 219
GVG PV K+ DE++ I L + KV
Sbjct: 282 GVGVFRKPPVFLKKGDEVQCEIEELGVIINKV 313
>gi|4885503 myosin IA [Homo sapiens]
Length = 1043
Score = 29.6 bits (65), Expect = 2.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 101 LDMTARDVQDECKKKGLPWTLAKSF 125
++MT ++ Q+E K++G+PWT F
Sbjct: 409 IEMTLKEEQEEYKREGIPWTKVDYF 433
>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
Length = 582
Score = 28.5 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 183 EEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVEKPE 223
E G++ + G +GVG V+E +E+E F VE+PE
Sbjct: 540 EGGEVGVVGEVEGVGEVEEVEELEEETAKEEPADFPVEQPE 580
>gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo
sapiens]
Length = 1977
Score = 27.7 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 99 LCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQ 158
LCL M + E ++ L + L K T + E + P K L E RQ
Sbjct: 990 LCLRMKLVSPETEASEESLQFNLEKPATGERKNGSTAVAESVASPQKTMSVLSCICEARQ 1049
Query: 159 EGETSS 164
E E S
Sbjct: 1050 ENEARS 1055
>gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo
sapiens]
Length = 1975
Score = 27.7 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 99 LCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQ 158
LCL M + E ++ L + L K T + E + P K L E RQ
Sbjct: 990 LCLRMKLVSPETEASEESLQFNLEKPATGERKNGSTAVAESVASPQKTMSVLSCICEARQ 1049
Query: 159 EGETSS 164
E E S
Sbjct: 1050 ENEARS 1055
>gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo
sapiens]
Length = 1972
Score = 27.7 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 99 LCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQ 158
LCL M + E ++ L + L K T + E + P K L E RQ
Sbjct: 985 LCLRMKLVSPETEASEESLQFNLEKPATGERKNGSTAVAESVASPQKTMSVLSCICEARQ 1044
Query: 159 EGETSS 164
E E S
Sbjct: 1045 ENEARS 1050
>gi|219555700 leucine rich repeat containing 27 isoform a [Homo
sapiens]
Length = 530
Score = 27.7 bits (60), Expect = 8.3
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 46 LKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTA 105
+KPS +P+ S + RNL +++ V+ + R A ++ + A L++ A
Sbjct: 415 MKPSKEKSPQASKEMSALQERNLEEKIKQHVLQMREQRRFHGQAPLEEMRKAAEDLEI-A 473
Query: 106 RDVQDECKKKGLPWTLAK 123
++QDE K L TL K
Sbjct: 474 TELQDEVLKLKLGLTLNK 491
>gi|55741567 leucine rich repeat containing 27 isoform a [Homo
sapiens]
Length = 530
Score = 27.7 bits (60), Expect = 8.3
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 46 LKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTA 105
+KPS +P+ S + RNL +++ V+ + R A ++ + A L++ A
Sbjct: 415 MKPSKEKSPQASKEMSALQERNLEEKIKQHVLQMREQRRFHGQAPLEEMRKAAEDLEI-A 473
Query: 106 RDVQDECKKKGLPWTLAK 123
++QDE K L TL K
Sbjct: 474 TELQDEVLKLKLGLTLNK 491
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,006,885
Number of Sequences: 37866
Number of extensions: 413234
Number of successful extensions: 815
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 801
Number of HSP's gapped (non-prelim): 13
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.