Guide to the Human Genome
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Name: HNMT Sequence: fasta or formatted (126aa) NCBI GI: 66932965
Description:

histamine N-methyltransferase isoform 3

Referenced in:

Histamine

Other entries for this name:
alt prot [292aa] histamine N-methyltransferase isoform 1
alt prot [51aa] histamine N-methyltransferase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          5           2
 C cysteine            3.2          4           1
 D aspartate           4.8          6           1
 E glutamate           5.6          7           1
 F phenylalanine       7.9         10           1
 G glycine             7.9         10           3
 H histidine           3.2          4           1
 I isoleucine          7.9         10           2
 K lysine              7.1          9           2
 L leucine             8.7         11           1
 M methionine          4.0          5           1
 N asparagine          1.6          2           1
 P proline             3.2          4           1
 Q glutamine           2.4          3           1
 R arginine            8.7         11           2
 S serine             14.3         18           2
 T threonine           2.4          3           1
 V valine              2.4          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histamine N-methyltransferase isoform 3 
HNMT                  0.459   histamine N-methyltransferase isoform 1 
HNMT                  0.323   histamine N-methyltransferase isoform 2 
IGF2R                 0.009   insulin-like growth factor 2 receptor precursor [Ho...
DENND1A               0.009   DENN/MADD domain containing 1A isoform 2 
DENND1A               0.009   DENN/MADD domain containing 1A isoform 1 
EVL                   0.009   Enah/Vasp-like 
ZNF560                0.009   zinc finger protein 560 
OSBPL2                0.009   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.009   oxysterol-binding protein-like protein 2 isoform 1 [H...
FES                   0.004   feline sarcoma oncogene isoform 4 
FES                   0.004   feline sarcoma oncogene isoform 3 
FES                   0.004   feline sarcoma oncogene isoform 2 
FES                   0.004   feline sarcoma oncogene isoform 1 
MRPS12                0.004   mitochondrial ribosomal protein S12 precursor 
MRPS12                0.004   mitochondrial ribosomal protein S12 precursor 
MRPS12                0.004   mitochondrial ribosomal protein S12 precursor 
IQCA1                 0.004   IQ motif containing with AAA domain 1 
FAM5B                 0.004   family with sequence similarity 5, member B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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