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Search of human proteins with 5802984
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5802984 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 1 [Homo sapiens]
(415 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5802984 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans... 847 0.0
gi|19924141 like-glycosyltransferase [Homo sapiens] 118 9e-27
gi|4758664 like-glycosyltransferase [Homo sapiens] 118 9e-27
gi|116235482 glycosyltransferase-like 1B [Homo sapiens] 99 5e-21
gi|205360925 mucin 15 isoform c [Homo sapiens] 31 2.4
gi|205360923 mucin 15 isoform a [Homo sapiens] 31 2.4
gi|40255098 mucin 15 isoform b [Homo sapiens] 31 2.4
gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 30 4.0
gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 30 4.0
gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 30 4.0
gi|145279204 exonuclease 3'-5' domain containing 3 [Homo sapiens] 30 4.0
gi|14589891 cadherin 3, type 1 preproprotein [Homo sapiens] 29 9.0
>gi|5802984 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 1 [Homo
sapiens]
Length = 415
Score = 847 bits (2189), Expect = 0.0
Identities = 415/415 (100%), Positives = 415/415 (100%)
Query: 1 MQMSYAIRCAFYQLLLAALMLVAMLQLLYLSLLSGLHGQEEQDQYFEFFPPSPRSVDQVK 60
MQMSYAIRCAFYQLLLAALMLVAMLQLLYLSLLSGLHGQEEQDQYFEFFPPSPRSVDQVK
Sbjct: 1 MQMSYAIRCAFYQLLLAALMLVAMLQLLYLSLLSGLHGQEEQDQYFEFFPPSPRSVDQVK 60
Query: 61 AQLRTALASGGVLDASGDYRVYRGLLKTTMDPNDVILATHASVDNLLHLSGLLERWEGPL 120
AQLRTALASGGVLDASGDYRVYRGLLKTTMDPNDVILATHASVDNLLHLSGLLERWEGPL
Sbjct: 61 AQLRTALASGGVLDASGDYRVYRGLLKTTMDPNDVILATHASVDNLLHLSGLLERWEGPL 120
Query: 121 SVSVFAATKEEAQLATVLAYALSSHCPDMRARVAMHLVCPSRYEAAVPDPREPGEFALLR 180
SVSVFAATKEEAQLATVLAYALSSHCPDMRARVAMHLVCPSRYEAAVPDPREPGEFALLR
Sbjct: 121 SVSVFAATKEEAQLATVLAYALSSHCPDMRARVAMHLVCPSRYEAAVPDPREPGEFALLR 180
Query: 181 SCQEVFDKLARVAQPGINYALGTNVSYPNNLLRNLAREGANYALVIDVDMVPSEGLWRGL 240
SCQEVFDKLARVAQPGINYALGTNVSYPNNLLRNLAREGANYALVIDVDMVPSEGLWRGL
Sbjct: 181 SCQEVFDKLARVAQPGINYALGTNVSYPNNLLRNLAREGANYALVIDVDMVPSEGLWRGL 240
Query: 241 REMLDQSNQWGGTALVVPAFEIRRARRMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTN 300
REMLDQSNQWGGTALVVPAFEIRRARRMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTN
Sbjct: 241 REMLDQSNQWGGTALVVPAFEIRRARRMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTN 300
Query: 301 YSRWVNLPEESLLRPAYVVPWQDPWEPFYVAGGKVPTFDERFRQYGFNRISQACELHVAG 360
YSRWVNLPEESLLRPAYVVPWQDPWEPFYVAGGKVPTFDERFRQYGFNRISQACELHVAG
Sbjct: 301 YSRWVNLPEESLLRPAYVVPWQDPWEPFYVAGGKVPTFDERFRQYGFNRISQACELHVAG 360
Query: 361 FDFEVLNEGFLVHKGFKEALKFHPQKEAENQHNKILYRQFKQELKAKYPNSPRRC 415
FDFEVLNEGFLVHKGFKEALKFHPQKEAENQHNKILYRQFKQELKAKYPNSPRRC
Sbjct: 361 FDFEVLNEGFLVHKGFKEALKFHPQKEAENQHNKILYRQFKQELKAKYPNSPRRC 415
>gi|19924141 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 118 bits (296), Expect = 9e-27
Identities = 93/328 (28%), Positives = 146/328 (44%), Gaps = 65/328 (19%)
Query: 91 DPNDVILATHASVDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMR 150
D DV L S+D L L + + WEGP+S++++ + E Q L YA S R
Sbjct: 470 DSTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQF---LRYAQGSEVLMSR 526
Query: 151 ARVAMHLVCPSRYEAAVPDPREPGEFALLRSCQEVFDKLARVAQPGINYALGTNVSYPNN 210
V H+V + G+F YP N
Sbjct: 527 HNVGYHIVY------------KEGQF------------------------------YPVN 544
Query: 211 LLRNLAREGAN--YALVIDVDMVPSEGLWRGLRE---MLDQSNQWGGTALVVPAFEIRRA 265
LLRN+A + + Y + D+D +P GL+ LR+ LD +N A++VPAFE R
Sbjct: 545 LLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANT--KKAMIVPAFETLRY 602
Query: 266 R-RMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDP 324
R P +K EL+ + +G + F Y + T APTN+++W Y V W+
Sbjct: 603 RLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKW------RTATTPYRVEWEAD 656
Query: 325 WEPFYVAGGKVPTFDERFRQYGFNRISQACELHVAGFDFEVLNEGFLVHKGFKEALKFHP 384
+EP+ V P +D RF +G+N+++ EL V ++F VL +++H A F
Sbjct: 657 FEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIH--MPHAPSFDI 714
Query: 385 QKEAENQHNKI----LYRQFKQELKAKY 408
K N+ +I L +F+Q++ +Y
Sbjct: 715 TKFRSNKQYRICLKTLKEEFQQDMSRRY 742
>gi|4758664 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 118 bits (296), Expect = 9e-27
Identities = 93/328 (28%), Positives = 146/328 (44%), Gaps = 65/328 (19%)
Query: 91 DPNDVILATHASVDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMR 150
D DV L S+D L L + + WEGP+S++++ + E Q L YA S R
Sbjct: 470 DSTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQF---LRYAQGSEVLMSR 526
Query: 151 ARVAMHLVCPSRYEAAVPDPREPGEFALLRSCQEVFDKLARVAQPGINYALGTNVSYPNN 210
V H+V + G+F YP N
Sbjct: 527 HNVGYHIVY------------KEGQF------------------------------YPVN 544
Query: 211 LLRNLAREGAN--YALVIDVDMVPSEGLWRGLRE---MLDQSNQWGGTALVVPAFEIRRA 265
LLRN+A + + Y + D+D +P GL+ LR+ LD +N A++VPAFE R
Sbjct: 545 LLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANT--KKAMIVPAFETLRY 602
Query: 266 R-RMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDP 324
R P +K EL+ + +G + F Y + T APTN+++W Y V W+
Sbjct: 603 RLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKW------RTATTPYRVEWEAD 656
Query: 325 WEPFYVAGGKVPTFDERFRQYGFNRISQACELHVAGFDFEVLNEGFLVHKGFKEALKFHP 384
+EP+ V P +D RF +G+N+++ EL V ++F VL +++H A F
Sbjct: 657 FEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIH--MPHAPSFDI 714
Query: 385 QKEAENQHNKI----LYRQFKQELKAKY 408
K N+ +I L +F+Q++ +Y
Sbjct: 715 TKFRSNKQYRICLKTLKEEFQQDMSRRY 742
>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
Length = 721
Score = 99.4 bits (246), Expect = 5e-21
Identities = 90/322 (27%), Positives = 129/322 (40%), Gaps = 62/322 (19%)
Query: 92 PNDVILATHASVDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMRA 151
P+DV L S+D L L L W GP+S++++ E Q L + +S R
Sbjct: 429 PHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQF---LHFVEASPVLAARQ 485
Query: 152 RVAMHLVCPSRYEAAVPDPREPGEFALLRSCQEVFDKLARVAQPGINYALGTNVSYPNNL 211
VA H+V Y G YP N
Sbjct: 486 DVAYHVV----------------------------------------YREGP--LYPVNQ 503
Query: 212 LRNLAREGA--NYALVIDVDMVPSEGLWRGLREMLDQSNQWGG--TALVVPAFEIRRAR- 266
LRN+A A Y + D+D +P+ L+ LR ++Q ALVVPAFE R R
Sbjct: 504 LRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQLGLGSRRKAALVVPAFETLRYRF 563
Query: 267 RMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDPWE 326
P +K EL+ L G + F Y APT+Y+RW + Y V W +E
Sbjct: 564 SFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYARWREA------QAPYRVQWAANYE 617
Query: 327 PFYVAGGKVPTFDERFRQYGFNRISQACELHVAGFDFEVLNEGFLVHKGFKEALKFHPQK 386
P+ V P +D RF +G+N+++ EL ++ VL E F +H L P
Sbjct: 618 PYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEAFTIH------LPHAPSL 671
Query: 387 EAENQHNKILYRQFKQELKAKY 408
+ + YR Q LK ++
Sbjct: 672 DISRFRSSPTYRDCLQALKDEF 693
>gi|205360925 mucin 15 isoform c [Homo sapiens]
Length = 311
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 16 LAALMLVAMLQLLYLSLLSGLHGQEEQD 43
+ AL + ++ L+ SLLSG HG+E QD
Sbjct: 28 MLALAKILLISTLFYSLLSGSHGKENQD 55
>gi|205360923 mucin 15 isoform a [Homo sapiens]
Length = 361
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 16 LAALMLVAMLQLLYLSLLSGLHGQEEQD 43
+ AL + ++ L+ SLLSG HG+E QD
Sbjct: 28 MLALAKILLISTLFYSLLSGSHGKENQD 55
>gi|40255098 mucin 15 isoform b [Homo sapiens]
Length = 334
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 16 LAALMLVAMLQLLYLSLLSGLHGQEEQD 43
+ AL + ++ L+ SLLSG HG+E QD
Sbjct: 1 MLALAKILLISTLFYSLLSGSHGKENQD 28
>gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4470
Score = 30.0 bits (66), Expect = 4.0
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 270 MNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDPWEPFY 329
+NKN L +L G +P A N + V + L P +P W+
Sbjct: 3151 LNKNNLTELKSFG----------SPPDAVVNVTAAVMI----LTAPGGKIPKDKSWKAAK 3196
Query: 330 VAGGKVPTFDERFRQYGFNRISQAC 354
+ GKV TF + +++ I +AC
Sbjct: 3197 IMMGKVDTFLDSLKKFDKEHIPEAC 3221
>gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4485
Score = 30.0 bits (66), Expect = 4.0
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 270 MNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDPWEPFY 329
+NKN L +L G +P A N + V + L P +P W+
Sbjct: 3129 LNKNNLTELKSFG----------SPPDAVVNVTAAVMI----LTAPGGKIPKDKSWKAAK 3174
Query: 330 VAGGKVPTFDERFRQYGFNRISQAC 354
+ GKV TF + +++ I +AC
Sbjct: 3175 IMMGKVDTFLDSLKKFDKEHIPEAC 3199
>gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4485
Score = 30.0 bits (66), Expect = 4.0
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 270 MNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDPWEPFY 329
+NKN L +L G +P A N + V + L P +P W+
Sbjct: 3129 LNKNNLTELKSFG----------SPPDAVVNVTAAVMI----LTAPGGKIPKDKSWKAAK 3174
Query: 330 VAGGKVPTFDERFRQYGFNRISQAC 354
+ GKV TF + +++ I +AC
Sbjct: 3175 IMMGKVDTFLDSLKKFDKEHIPEAC 3199
>gi|145279204 exonuclease 3'-5' domain containing 3 [Homo sapiens]
Length = 876
Score = 30.0 bits (66), Expect = 4.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 259 AFEIRRARRMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLP--EESLLRPA 316
A E+RR R + E +V +++ YY L P + + W +L E +LL+
Sbjct: 335 AVELRRFR-LQGRATEADSRLEVKDMKDRYYQLPIPRENVHLLASWEDLTRHEGALLQCH 393
Query: 317 YVVPWQDPWEPFYVAGGK 334
VV W P +VAGG+
Sbjct: 394 QVVGVDVEWTPVFVAGGR 411
>gi|14589891 cadherin 3, type 1 preproprotein [Homo sapiens]
Length = 829
Score = 28.9 bits (63), Expect = 9.0
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 91 DPNDVILATHASVDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMR 150
DP+D++ H S + +S L+R + P AT + +T A A+ +
Sbjct: 264 DPHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAV---VEILD 320
Query: 151 ARVAMHLVCPSRYEAAVPD 169
A + P +YEA VP+
Sbjct: 321 ANDNAPMFDPQKYEAHVPE 339
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,957,512
Number of Sequences: 37866
Number of extensions: 703376
Number of successful extensions: 1460
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1439
Number of HSP's gapped (non-prelim): 18
length of query: 415
length of database: 18,247,518
effective HSP length: 105
effective length of query: 310
effective length of database: 14,271,588
effective search space: 4424192280
effective search space used: 4424192280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.