Search of human proteins with 53759151

Search of human proteins with 53759151

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|53759151 stearoyl-CoA desaturase 1 [Homo sapiens]
         (359 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|53759151 stearoyl-CoA desaturase 1 [Homo sapiens]                  754   0.0  
gi|148596961 stearoyl-CoA desaturase 5 isoform a [Homo sapiens]       413   e-115
gi|148596938 stearoyl-CoA desaturase 5 isoform b [Homo sapiens]       221   8e-58
gi|198041678 solute carrier family 12 (potassium-chloride transp...    30   4.4  
gi|11968148 solute carrier family 12 (potassium-chloride transpo...    30   4.4  
gi|24797153 faciogenital dysplasia protein [Homo sapiens]              28   9.7  

>gi|53759151 stearoyl-CoA desaturase 1 [Homo sapiens]
          Length = 359

 Score =  754 bits (1946), Expect = 0.0
 Identities = 359/359 (100%), Positives = 359/359 (100%)

Query: 1   MPAHLLQDDISSSYTTTTTITAPPSRVLQNGGDKLETMPLYLEDDIRPDIKDDIYDPTYK 60
           MPAHLLQDDISSSYTTTTTITAPPSRVLQNGGDKLETMPLYLEDDIRPDIKDDIYDPTYK
Sbjct: 1   MPAHLLQDDISSSYTTTTTITAPPSRVLQNGGDKLETMPLYLEDDIRPDIKDDIYDPTYK 60

Query: 61  DKEGPSPKVEYVWRNIILMSLLHLGALYGITLIPTCKFYTWLWGVFYYFVSALGITAGAH 120
           DKEGPSPKVEYVWRNIILMSLLHLGALYGITLIPTCKFYTWLWGVFYYFVSALGITAGAH
Sbjct: 61  DKEGPSPKVEYVWRNIILMSLLHLGALYGITLIPTCKFYTWLWGVFYYFVSALGITAGAH 120

Query: 121 RLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFS 180
           RLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFS
Sbjct: 121 RLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFS 180

Query: 181 HVGWLLVRKHPAVKEKGSTLDLSDLEAEKLVMFQRRYYKPGLLMMCFILPTLVPWYFWGE 240
           HVGWLLVRKHPAVKEKGSTLDLSDLEAEKLVMFQRRYYKPGLLMMCFILPTLVPWYFWGE
Sbjct: 181 HVGWLLVRKHPAVKEKGSTLDLSDLEAEKLVMFQRRYYKPGLLMMCFILPTLVPWYFWGE 240

Query: 241 TFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNY 300
           TFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNY
Sbjct: 241 TFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNY 300

Query: 301 HHSFPYDYSASEYRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYKSG 359
           HHSFPYDYSASEYRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYKSG
Sbjct: 301 HHSFPYDYSASEYRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYKSG 359


>gi|148596961 stearoyl-CoA desaturase 5 isoform a [Homo sapiens]
          Length = 330

 Score =  413 bits (1062), Expect = e-115
 Identities = 186/284 (65%), Positives = 234/284 (82%)

Query: 72  VWRNIILMSLLHLGALYGITLIPTCKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKAR 131
           VWRN++LMSLLHLGA+Y + LIP  K  T LW  F + ++ALG+TAGAHRLWSHRSY+A+
Sbjct: 46  VWRNVVLMSLLHLGAVYSLVLIPKAKPLTLLWAYFCFLLAALGVTAGAHRLWSHRSYRAK 105

Query: 132 LPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHP 191
           LPLR+FL +AN+MAFQND++EW+RDHRAHHK+SET ADPHN+RRGFFFSH+GWL VRKH 
Sbjct: 106 LPLRIFLAVANSMAFQNDIFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHR 165

Query: 192 AVKEKGSTLDLSDLEAEKLVMFQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATF 251
            V EKG  LD++DL A+ +V  QR+YYK  +++MCF++PTLVPWY WGE+  NS F+A+ 
Sbjct: 166 DVIEKGRKLDVTDLLADPVVRIQRKYYKISVVLMCFVVPTLVPWYIWGESLWNSYFLASI 225

Query: 252 LRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSAS 311
           LRY + LN +WLVNSAAH++G RPYDK+ISPR+N LV+LGA+GEGFHNYHH+FP+DYSAS
Sbjct: 226 LRYTISLNISWLVNSAAHMYGNRPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSAS 285

Query: 312 EYRWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGN 355
           E+  + N TT+FID M  LGLA DRK+ +K  I AR  RTGD +
Sbjct: 286 EFGLNFNPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 329


>gi|148596938 stearoyl-CoA desaturase 5 isoform b [Homo sapiens]
          Length = 256

 Score =  221 bits (563), Expect = 8e-58
 Identities = 98/144 (68%), Positives = 121/144 (84%)

Query: 72  VWRNIILMSLLHLGALYGITLIPTCKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKAR 131
           VWRN++LMSLLHLGA+Y + LIP  K  T LW  F + ++ALG+TAGAHRLWSHRSY+A+
Sbjct: 46  VWRNVVLMSLLHLGAVYSLVLIPKAKPLTLLWAYFCFLLAALGVTAGAHRLWSHRSYRAK 105

Query: 132 LPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHP 191
           LPLR+FL +AN+MAFQND++EW+RDHRAHHK+SET ADPHN+RRGFFFSH+GWL VRKH 
Sbjct: 106 LPLRIFLAVANSMAFQNDIFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHR 165

Query: 192 AVKEKGSTLDLSDLEAEKLVMFQR 215
            V EKG  LD++DL A+ +V  QR
Sbjct: 166 DVIEKGRKLDVTDLLADPVVRIQR 189


>gi|198041678 solute carrier family 12 (potassium-chloride
           transporter), member 5 isoform 1 [Homo sapiens]
          Length = 1139

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 98  FYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMA 145
           ++T L G+  YF S  GI AG++R    R  +  +P    L IA T A
Sbjct: 422 YFTLLVGI--YFPSVTGIMAGSNRSGDLRDAQKSIPTGTILAIATTSA 467


>gi|11968148 solute carrier family 12 (potassium-chloride
           transporter), member 5 isoform 2 [Homo sapiens]
          Length = 1116

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 98  FYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMA 145
           ++T L G+  YF S  GI AG++R    R  +  +P    L IA T A
Sbjct: 399 YFTLLVGI--YFPSVTGIMAGSNRSGDLRDAQKSIPTGTILAIATTSA 444


>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
          Length = 961

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%)

Query: 11  SSSYTTTTTITAPPSRVLQNGGDKLETMPLYLEDDIRP---------DIKDDIYDPTYKD 61
           +S  T   +   PPS  L  G   L ++P+ L D  RP         + +DD  +   KD
Sbjct: 293 NSEETCFVSDDGPPSHSLCPGPPALASVPVALADPHRPGSQEVDSDLEEEDDEEEEEEKD 352

Query: 62  KEGPSPKVE 70
           +E P P +E
Sbjct: 353 REIPVPLME 361


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,938,989
Number of Sequences: 37866
Number of extensions: 607772
Number of successful extensions: 1616
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1613
Number of HSP's gapped (non-prelim): 6
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.