Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 50541965

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo
sapiens]
         (532 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo sa...  1097   0.0  
gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo sa...  1097   0.0  
gi|4503755 flavin containing monooxygenase 1 [Homo sapiens]           611   e-175
gi|4503759 flavin containing monooxygenase 4 [Homo sapiens]           594   e-170
gi|4503757 flavin containing monooxygenase 2 (non-functional) [H...   592   e-169
gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo s...   580   e-165
gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo s...   494   e-140
gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo s...   346   3e-95
gi|156139141 FAD-dependent oxidoreductase domain containing 2 [H...    36   0.10 
gi|156139139 FAD-dependent oxidoreductase domain containing 2 [H...    36   0.10 
gi|28559080 spermine oxidase isoform 4 [Homo sapiens]                  35   0.13 
gi|28559078 spermine oxidase isoform 3 [Homo sapiens]                  35   0.13 
gi|28559076 spermine oxidase isoform 2 [Homo sapiens]                  35   0.13 
gi|28559074 spermine oxidase isoform 1 [Homo sapiens]                  35   0.13 
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a...    35   0.17 
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b...    35   0.17 
gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sa...    33   0.65 
gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sa...    32   1.4  
gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens]           32   1.4  

>gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo
           sapiens]
          Length = 532

 Score = 1097 bits (2837), Expect = 0.0
 Identities = 532/532 (100%), Positives = 532/532 (100%)

Query: 1   MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS 60
           MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS
Sbjct: 1   MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS 60

Query: 61  NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA 120
           NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA
Sbjct: 61  NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA 120

Query: 121 TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG 180
           TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG
Sbjct: 121 TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG 180

Query: 181 VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG 240
           VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG
Sbjct: 181 VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG 240

Query: 241 TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK 300
           TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK
Sbjct: 241 TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK 300

Query: 301 PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL 360
           PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL
Sbjct: 301 PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL 360

Query: 361 LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF 420
           LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF
Sbjct: 361 LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF 420

Query: 421 GKSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQWP 480
           GKSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQWP
Sbjct: 421 GKSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQWP 480

Query: 481 GARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLVLT 532
           GARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLVLT
Sbjct: 481 GARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLVLT 532


>gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo
           sapiens]
          Length = 532

 Score = 1097 bits (2837), Expect = 0.0
 Identities = 532/532 (100%), Positives = 532/532 (100%)

Query: 1   MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS 60
           MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS
Sbjct: 1   MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS 60

Query: 61  NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA 120
           NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA
Sbjct: 61  NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA 120

Query: 121 TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG 180
           TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG
Sbjct: 121 TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG 180

Query: 181 VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG 240
           VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG
Sbjct: 181 VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG 240

Query: 241 TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK 300
           TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK
Sbjct: 241 TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK 300

Query: 301 PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL 360
           PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL
Sbjct: 301 PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL 360

Query: 361 LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF 420
           LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF
Sbjct: 361 LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF 420

Query: 421 GKSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQWP 480
           GKSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQWP
Sbjct: 421 GKSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQWP 480

Query: 481 GARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLVLT 532
           GARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLVLT
Sbjct: 481 GARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLVLT 532


>gi|4503755 flavin containing monooxygenase 1 [Homo sapiens]
          Length = 532

 Score =  611 bits (1576), Expect = e-175
 Identities = 291/532 (54%), Positives = 391/532 (73%), Gaps = 4/532 (0%)

Query: 1   MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS 60
           M K+VAI+GAGVSGLASI+ CLEEGLEPTCFE+S+D+GGLW+F++H EEGRAS+YKSV S
Sbjct: 1   MAKRVAIVGAGVSGLASIKCCLEEGLEPTCFERSDDLGGLWRFTEHVEEGRASLYKSVVS 60

Query: 61  NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA 120
           NS KEM C+ DFPFP+D+PN++ NS+  EY+  +A   +LLK+IQFKT V SV K  D A
Sbjct: 61  NSCKEMSCYSDFPFPEDYPNYVPNSQFLEYLKMYANHFDLLKHIQFKTKVCSVTKCSDSA 120

Query: 121 TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG 180
            +GQW+V T  + K+ESA+FDAVMVC+G    P LP +SFPG+N FKG+ FHSR YK P 
Sbjct: 121 VSGQWEVVTMHEEKQESAIFDAVMVCTGFLTNPYLPLDSFPGINAFKGQYFHSRQYKHPD 180

Query: 181 VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG 240
           +F  KRVLV+G+GNSG DIA E S  AE+V +S+  G WV+SR++D+GYPWDM+ +TRF 
Sbjct: 181 IFKDKRVLVIGMGNSGTDIAVEASHLAEKVFLSTTGGGWVISRIFDSGYPWDMVFMTRFQ 240

Query: 241 TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK 300
             L+N+LPT I  WL  +++N    H NYGL+P +    KE V NDELP  I+ G V ++
Sbjct: 241 NMLRNSLPTPIVTWLMERKINNWLNHANYGLIPEDRTQLKEFVLNDELPGRIITGKVFIR 300

Query: 301 PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL 360
           P++KE  E S IF + +  E ID ++FATGY+FA+PFLDES++K  + +  L+K +FP  
Sbjct: 301 PSIKEVKENSVIFNNTSKEEPIDIIVFATGYTFAFPFLDESVVKVEDGQASLYKYIFPAH 360

Query: 361 LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF 420
           L+K T+A+IG ++ LG+ IPT + Q+RWA +V+KG   LP    M+ +IN + E K  WF
Sbjct: 361 LQKPTLAIIGLIKPLGSMIPTGETQARWAVRVLKGVNKLPPPSVMIEEINARKENKPSWF 420

Query: 421 G--KSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQ 478
           G    + +Q+DYI Y+DEL ++I AKPN+  + LTDP LA+ V+FGPCSPYQFRL GPG+
Sbjct: 421 GLCYCKALQSDYITYIDELLTYINAKPNLFSMLLTDPHLALTVFFGPCSPYQFRLTGPGK 480

Query: 479 WPGARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLV 530
           W GARNAI+TQWDR+ K ++ RVV   + P  F  +LK+F+   LL+A+FL+
Sbjct: 481 WEGARNAIMTQWDRTFKVIKARVV--QESPSPFESFLKVFSFLALLVAIFLI 530


>gi|4503759 flavin containing monooxygenase 4 [Homo sapiens]
          Length = 558

 Score =  594 bits (1532), Expect = e-170
 Identities = 280/531 (52%), Positives = 390/531 (73%), Gaps = 2/531 (0%)

Query: 1   MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS 60
           M KKVA+IGAGVSGL+SI+ C++E LEPTCFE+S+DIGGLWKF++ +++G   +YKS+ +
Sbjct: 1   MAKKVAVIGAGVSGLSSIKCCVDEDLEPTCFERSDDIGGLWKFTESSKDGMTRVYKSLVT 60

Query: 61  NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA 120
           N  KEM C+ DFPF +D+PNFM++ K  +Y+  FA+  +LLKYIQFKT V S+ K PDF+
Sbjct: 61  NVCKEMSCYSDFPFHEDYPNFMNHEKFWDYLQEFAEHFDLLKYIQFKTTVCSITKRPDFS 120

Query: 121 TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG 180
            TGQWDV TE +GK+  AVFDAVMVC+GH + P+LP E+FPG++ FKG+  HS++YK P 
Sbjct: 121 ETGQWDVVTETEGKQNRAVFDAVMVCTGHFLNPHLPLEAFPGIHKFKGQILHSQEYKIPE 180

Query: 181 VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG 240
            F GKRVLV+GLGN+G DIA ELSRTA QV++S+R+G+WV+ R  D GYP++M++  R  
Sbjct: 181 GFQGKRVLVIGLGNTGGDIAVELSRTAAQVLLSTRTGTWVLGRSSDWGYPYNMMVTRRCC 240

Query: 241 TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK 300
           +F+   LP+   +W+  +++N RF HE+YGL    G   K  + NDELP  ILCG +++K
Sbjct: 241 SFIAQVLPSRFLNWIQERKLNKRFNHEDYGLSITKGKKAKF-IVNDELPNCILCGAITMK 299

Query: 301 PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL 360
            +V EFTETSA+FEDGT+ E ID VIF TGY+F++PF +E +      +I L+K VFP  
Sbjct: 300 TSVIEFTETSAVFEDGTVEENIDVVIFTTGYTFSFPFFEEPLKSLCTKKIFLYKQVFPLN 359

Query: 361 LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEK-KRKW 419
           LE++T+A+IG +   G+ +   +LQ+RW  +V KG C +P  + +M +  EK +  KR  
Sbjct: 360 LERATLAIIGLIGLKGSILSGTELQARWVTRVFKGLCKIPPSQKLMMEATEKEQLIKRGV 419

Query: 420 FGKSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQW 479
           F  +   + DYI YMD++++ IG KP+IP LFL DP+LA EV+FGPC+PYQ+RL+GPG+W
Sbjct: 420 FKDTSKDKFDYIAYMDDIAACIGTKPSIPLLFLKDPRLAWEVFFGPCTPYQYRLMGPGKW 479

Query: 480 PGARNAILTQWDRSLKPMQTRVVGRLQKPCFFFHWLKLFAIPILLIAVFLV 530
            GARNAILTQWDR+LKP++TR+V    KP    H+LK +  P+LL ++ L+
Sbjct: 480 DGARNAILTQWDRTLKPLKTRIVPDSSKPASMSHYLKAWGAPVLLASLLLI 530


>gi|4503757 flavin containing monooxygenase 2 (non-functional) [Homo
           sapiens]
          Length = 471

 Score =  592 bits (1526), Expect = e-169
 Identities = 275/471 (58%), Positives = 362/471 (76%), Gaps = 2/471 (0%)

Query: 1   MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFS 60
           M KKVA+IGAGVSGL S++ C++EGLEPTCFE++ DIGG+W+F ++ E+GRASIY+SV +
Sbjct: 1   MAKKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDGRASIYQSVVT 60

Query: 61  NSSKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFA 120
           N+SKEM CF DFP P+DFPNF+HNSK+ EY   FAK+ +LLKYIQF+T V SV K PDF+
Sbjct: 61  NTSKEMSCFSDFPMPEDFPNFLHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFS 120

Query: 121 TTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPG 180
           ++GQW V T+ +GK++SAVFDAVMVCSGHH+ P++P +SFPG+  FKG+ FHSR YK P 
Sbjct: 121 SSGQWKVVTQSNGKEQSAVFDAVMVCSGHHILPHIPLKSFPGMERFKGQYFHSRQYKHPD 180

Query: 181 VFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG 240
            F GKR+LV+G+GNSG DIA ELS+ A QV IS+R G+WVMSR+ ++GYPWD +  TRF 
Sbjct: 181 GFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRISEDGYPWDSVFHTRFR 240

Query: 241 TFLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVK 300
           + L+N LP     W+  +QMN  F HENYGL P N  + KEPV ND++P+ +LCG + VK
Sbjct: 241 SMLRNVLPRTAVKWMIEQQMNRWFNHENYGLEPQNKYIMKEPVLNDDVPSRLLCGAIKVK 300

Query: 301 PNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPL 360
             VKE TETSAIFEDGT+ E ID +IFATGYSF++PFL++S++K  NN + L+K +FP  
Sbjct: 301 STVKELTETSAIFEDGTVEENIDVIIFATGYSFSFPFLEDSLVKVENNMVSLYKYIFPAH 360

Query: 361 LEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWF 420
           L+KST+A IG +Q LG+  PT +LQ+RW  +V KG C+LPS   MM DI ++ EK+   F
Sbjct: 361 LDKSTLACIGLIQPLGSIFPTAELQARWVTRVFKGLCSLPSERTMMMDIIKRNEKRIDLF 420

Query: 421 G--KSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPY 469
           G  +S+T+QT+Y+ Y+DEL+  IGAKP+   L   DPKLA+ +YFGPC+ Y
Sbjct: 421 GESQSQTLQTNYVDYLDELALEIGAKPDFCSLLFKDPKLAVRLYFGPCNSY 471


>gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo
           sapiens]
          Length = 533

 Score =  580 bits (1495), Expect = e-165
 Identities = 281/504 (55%), Positives = 373/504 (74%), Gaps = 3/504 (0%)

Query: 3   KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFSNS 62
           K++A+IG GVSGL+SI+ C+EEGLEP CFE+++DIGGLW+F ++ EEGRASIYKSV  N+
Sbjct: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63

Query: 63  SKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFATT 122
           SKEMMCF D+P PD +PNFMHN+++ EY   +AKE +LLKYI+FKT V SV K PDFAT+
Sbjct: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123

Query: 123 GQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVF 182
           GQW+V TE +GKKE  VFD VMVC+GHH   +LP ESFPG+  FKG+ FHSRDYK P  F
Sbjct: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183

Query: 183 NGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFGTF 242
            GKRV+++G+GNSG D+A E+S+TA+QV +S+R G+W+++RV D GYP D+L  +R   F
Sbjct: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243

Query: 243 LKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVKPN 302
           +      ++++    K++N RF HE +GL P +  L + P  ND+LP  I+ G+V VK N
Sbjct: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGN 303

Query: 303 VKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPLLE 362
           VKEFTET+AIFEDG+  + ID VIFATGYSF +PFL++S +K   N+I L+K VFPP LE
Sbjct: 304 VKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDS-VKVVKNKISLYKKVFPPNLE 362

Query: 363 KSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKKRKWFGK 422
           + T+A+IG +Q LGA +P  +LQ RWA QV KG  TLPS  +MM +I++  E+  K + +
Sbjct: 363 RPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDKRYVE 422

Query: 423 SE--TIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQWP 480
           S+  TIQ DYI  M+EL+  +G +PN+  L  TDPKLA+ +  GPC+P  +R+ GPG+W 
Sbjct: 423 SQRHTIQGDYIDTMEELADLVGVRPNLLSLAFTDPKLALHLLLGPCTPIHYRVQGPGKWD 482

Query: 481 GARNAILTQWDRSLKPMQTRVVGR 504
           GAR AILT  DR  KP+ TRVV R
Sbjct: 483 GARKAILTTDDRIRKPLMTRVVER 506


>gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo
           sapiens]
          Length = 464

 Score =  494 bits (1273), Expect = e-140
 Identities = 235/413 (56%), Positives = 312/413 (75%), Gaps = 1/413 (0%)

Query: 3   KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFSNS 62
           K++A+IG GVSGL+SI+ C+EEGLEP CFE+++DIGGLW+F ++ EEGRASIYKSV  N+
Sbjct: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63

Query: 63  SKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFATT 122
           SKEMMCF D+P PD +PNFMHN+++ EY   +AKE +LLKYI+FKT V SV K PDFAT+
Sbjct: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123

Query: 123 GQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVF 182
           GQW+V TE +GKKE  VFD VMVC+GHH   +LP ESFPG+  FKG+ FHSRDYK P  F
Sbjct: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183

Query: 183 NGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFGTF 242
            GKRV+++G+GNSG D+A E+S+TA+QV +S+R G+W+++RV D GYP D+L  +R   F
Sbjct: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243

Query: 243 LKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVKPN 302
           +      ++++    K++N RF HE +GL P +  L + P  ND+LP  I+ G+V VK N
Sbjct: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGN 303

Query: 303 VKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPLLE 362
           VKEFTET+AIFEDG+  + ID VIFATGYSF +PFL++S +K   N+I L+K VFPP LE
Sbjct: 304 VKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDS-VKVVKNKISLYKKVFPPNLE 362

Query: 363 KSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEK 415
           + T+A+IG +Q LGA +P  +LQ RWA QV KG  TLPS  +MM +I++  E+
Sbjct: 363 RPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEE 415


>gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo
           sapiens]
          Length = 285

 Score =  346 bits (888), Expect = 3e-95
 Identities = 158/271 (58%), Positives = 210/271 (77%)

Query: 3   KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFSNS 62
           K++A+IG GVSGL+SI+ C+EEGLEP CFE+++DIGGLW+F ++ EEGRASIYKSV  N+
Sbjct: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63

Query: 63  SKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFATT 122
           SKEMMCF D+P PD +PNFMHN+++ EY   +AKE +LLKYI+FKT V SV K PDFAT+
Sbjct: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123

Query: 123 GQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVF 182
           GQW+V TE +GKKE  VFD VMVC+GHH   +LP ESFPG+  FKG+ FHSRDYK P  F
Sbjct: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183

Query: 183 NGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFGTF 242
            GKRV+++G+GNSG D+A E+S+TA+QV +S+R G+W+++RV D GYP D+L  +R   F
Sbjct: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243

Query: 243 LKNNLPTAISDWLYVKQMNARFKHENYGLMP 273
           +      ++++    K++N RF HE +GL P
Sbjct: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKP 274


>gi|156139141 FAD-dependent oxidoreductase domain containing 2 [Homo
           sapiens]
          Length = 684

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 30/275 (10%)

Query: 7   IIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLW-KFSDHAEEGRASIYKSVFSNSSKE 65
           ++GAG +GL         G +   FE++   G  + ++  H +    SI K     ++ E
Sbjct: 35  VLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSFFTRYPRHRK--LISINKRYTGKANAE 92

Query: 66  MMCFPDF-PFPDDFPNFMHNSKIQEYIIAFAKEKNLLKY-----------IQFKTFVSSV 113
                D+       P  +     + Y   F   +++++Y           +Q+ T ++ V
Sbjct: 93  FNLRHDWNSLLSHDPRLLFRHYSRAY---FPDARDMVRYLGDFADTLGLRVQYNTTIAHV 149

Query: 114 NKHPDF-ATTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFH 172
               D  A  G + + T++ G+        + V +G  V PN  +  FPG  + +G    
Sbjct: 150 TLDKDRQAWNGHYFILTDQKGQVHQC--SVLFVATGLSV-PN--QVDFPGSEYAEGYESV 204

Query: 173 SRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSG---SWVMSRVWDNGY 229
           S D   P  F G+ VL++G GNS  + A  +      + + SRS    SW    V D   
Sbjct: 205 SVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLRA 261

Query: 230 PWDMLLVTRFGTFLKNNLPTAISDWLYVKQMNARF 264
             + LL T     L   L + ++D   +K    +F
Sbjct: 262 INNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKF 296


>gi|156139139 FAD-dependent oxidoreductase domain containing 2 [Homo
           sapiens]
          Length = 684

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 30/275 (10%)

Query: 7   IIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLW-KFSDHAEEGRASIYKSVFSNSSKE 65
           ++GAG +GL         G +   FE++   G  + ++  H +    SI K     ++ E
Sbjct: 35  VLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSFFTRYPRHRK--LISINKRYTGKANAE 92

Query: 66  MMCFPDF-PFPDDFPNFMHNSKIQEYIIAFAKEKNLLKY-----------IQFKTFVSSV 113
                D+       P  +     + Y   F   +++++Y           +Q+ T ++ V
Sbjct: 93  FNLRHDWNSLLSHDPRLLFRHYSRAY---FPDARDMVRYLGDFADTLGLRVQYNTTIAHV 149

Query: 114 NKHPDF-ATTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFH 172
               D  A  G + + T++ G+        + V +G  V PN  +  FPG  + +G    
Sbjct: 150 TLDKDRQAWNGHYFILTDQKGQVHQC--SVLFVATGLSV-PN--QVDFPGSEYAEGYESV 204

Query: 173 SRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSG---SWVMSRVWDNGY 229
           S D   P  F G+ VL++G GNS  + A  +      + + SRS    SW    V D   
Sbjct: 205 SVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLRA 261

Query: 230 PWDMLLVTRFGTFLKNNLPTAISDWLYVKQMNARF 264
             + LL T     L   L + ++D   +K    +F
Sbjct: 262 INNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKF 296


>gi|28559080 spermine oxidase isoform 4 [Homo sapiens]
          Length = 532

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 4  KVAIIGAGVSGLASIRSCLEEGL-EPTCFEKSNDIGG 39
          +V +IGAG++GLA+ ++ LE+G  + T  E S+ IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|28559078 spermine oxidase isoform 3 [Homo sapiens]
          Length = 190

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 4  KVAIIGAGVSGLASIRSCLEEGL-EPTCFEKSNDIGG 39
          +V +IGAG++GLA+ ++ LE+G  + T  E S+ IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|28559076 spermine oxidase isoform 2 [Homo sapiens]
          Length = 502

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 4  KVAIIGAGVSGLASIRSCLEEGL-EPTCFEKSNDIGG 39
          +V +IGAG++GLA+ ++ LE+G  + T  E S+ IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|28559074 spermine oxidase isoform 1 [Homo sapiens]
          Length = 555

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 4  KVAIIGAGVSGLASIRSCLEEGL-EPTCFEKSNDIGG 39
          +V +IGAG++GLA+ ++ LE+G  + T  E S+ IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
           [Homo sapiens]
          Length = 876

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 4   KVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG 39
           KV IIG+GVSGLA+ R     G++ T  E  + +GG
Sbjct: 300 KVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 335


>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
           [Homo sapiens]
          Length = 852

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 4   KVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG 39
           KV IIG+GVSGLA+ R     G++ T  E  + +GG
Sbjct: 280 KVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315


>gi|116256451 amine oxidase (flavin containing) domain 1 [Homo
           sapiens]
          Length = 590

 Score = 33.1 bits (74), Expect = 0.65
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 3   KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG-LW--KFSDHAEEGRASIYKSVF 59
           K V IIGAG +GLA+ R     G++ T  E  + IGG +W  K       GR +   +  
Sbjct: 251 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGC 310

Query: 60  SNSSKEMMC 68
            N+   +MC
Sbjct: 311 INNPVALMC 319


>gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo
          sapiens]
          Length = 567

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 3  KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG 39
          ++V ++GAGV+GL + +   + G + T  E  N IGG
Sbjct: 60 QRVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGG 96


>gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens]
          Length = 589

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 3   KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG 39
           ++V ++GAGV+GL + +   + G + T  E  N IGG
Sbjct: 82  QRVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGG 118


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,068,558
Number of Sequences: 37866
Number of extensions: 877391
Number of successful extensions: 1805
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1774
Number of HSP's gapped (non-prelim): 24
length of query: 532
length of database: 18,247,518
effective HSP length: 107
effective length of query: 425
effective length of database: 14,195,856
effective search space: 6033238800
effective search space used: 6033238800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press