Search of human proteins with 13375746

Search of human proteins with 13375746

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13375746 hypothetical protein LOC79624 [Homo sapiens]
         (441 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13375746 hypothetical protein LOC79624 [Homo sapiens]              916   0.0  
gi|18450371 protein tyrosine phosphatase, receptor type, A isofo...    35   0.18 
gi|4506303 protein tyrosine phosphatase, receptor type, A isofor...    35   0.18 
gi|18450369 protein tyrosine phosphatase, receptor type, A isofo...    35   0.18 
gi|8922256 estrogen-related receptor beta like 1 [Homo sapiens]        34   0.30 
gi|74319833 ubiquitin specific protease 9, Y-linked [Homo sapiens]     33   0.67 
gi|55770832 cerebellar degeneration-related protein 2 [Homo sapi...    32   1.1  
gi|157502184 kinesin family member 6 [Homo sapiens]                    32   1.1  
gi|211059425 hypothetical protein LOC284422 [Homo sapiens]             31   2.0  
gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]     30   5.7  
gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]     30   5.7  
gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]     30   5.7  
gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]      30   5.7  
gi|9951915 adenosylhomocysteinase isoform 1 [Homo sapiens]             29   7.5  
gi|239937451 adenosylhomocysteinase isoform 2 [Homo sapiens]           29   7.5  
gi|4826870 nucleobindin 2 [Homo sapiens]                               29   7.5  
gi|41872646 cullin 7 [Homo sapiens]                                    29   9.7  
gi|9256614 protocadherin beta 3 precursor [Homo sapiens]               29   9.7  

>gi|13375746 hypothetical protein LOC79624 [Homo sapiens]
          Length = 441

 Score =  916 bits (2367), Expect = 0.0
 Identities = 441/441 (100%), Positives = 441/441 (100%)

Query: 1   MAVVPASLSGQDVGSFAYLTIKDRIPQILTKVIDTLHRHKSEFFEKHGEEGVEAEKKAIS 60
           MAVVPASLSGQDVGSFAYLTIKDRIPQILTKVIDTLHRHKSEFFEKHGEEGVEAEKKAIS
Sbjct: 1   MAVVPASLSGQDVGSFAYLTIKDRIPQILTKVIDTLHRHKSEFFEKHGEEGVEAEKKAIS 60

Query: 61  LLSKLRNELQTDKPFIPLVEKFVDTDIWNQYLEYQQSLLNESDGKSRWFYSPWLLVECYM 120
           LLSKLRNELQTDKPFIPLVEKFVDTDIWNQYLEYQQSLLNESDGKSRWFYSPWLLVECYM
Sbjct: 61  LLSKLRNELQTDKPFIPLVEKFVDTDIWNQYLEYQQSLLNESDGKSRWFYSPWLLVECYM 120

Query: 121 YRRIHEAIIQSPPIDYFDVFKESKEQNFYGSQESIIALCTHLQQLIRTIEDLDENQLKDE 180
           YRRIHEAIIQSPPIDYFDVFKESKEQNFYGSQESIIALCTHLQQLIRTIEDLDENQLKDE
Sbjct: 121 YRRIHEAIIQSPPIDYFDVFKESKEQNFYGSQESIIALCTHLQQLIRTIEDLDENQLKDE 180

Query: 181 FFKLLQISLWGNKCDLSLSGGESSSQNTNVLNSLEDLKPFILLNDMEHLWSLLSNCKKTR 240
           FFKLLQISLWGNKCDLSLSGGESSSQNTNVLNSLEDLKPFILLNDMEHLWSLLSNCKKTR
Sbjct: 181 FFKLLQISLWGNKCDLSLSGGESSSQNTNVLNSLEDLKPFILLNDMEHLWSLLSNCKKTR 240

Query: 241 EKASATRVYIVLDNSGFELVTDLILADFLLSSELATEVHFYGKTIPWFVSDTTIHDFNWL 300
           EKASATRVYIVLDNSGFELVTDLILADFLLSSELATEVHFYGKTIPWFVSDTTIHDFNWL
Sbjct: 241 EKASATRVYIVLDNSGFELVTDLILADFLLSSELATEVHFYGKTIPWFVSDTTIHDFNWL 300

Query: 301 IEQVKHSNHKWMSKCGADWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAH 360
           IEQVKHSNHKWMSKCGADWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAH
Sbjct: 301 IEQVKHSNHKWMSKCGADWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAH 360

Query: 361 LILFKGDLNYRKLTGDRKWEFSVPFHQALNGFHPAPLCTIRTLKAEIQVGLQPGQGEQLL 420
           LILFKGDLNYRKLTGDRKWEFSVPFHQALNGFHPAPLCTIRTLKAEIQVGLQPGQGEQLL
Sbjct: 361 LILFKGDLNYRKLTGDRKWEFSVPFHQALNGFHPAPLCTIRTLKAEIQVGLQPGQGEQLL 420

Query: 421 ASEPSWWTTGKYGIFQYDGPL 441
           ASEPSWWTTGKYGIFQYDGPL
Sbjct: 421 ASEPSWWTTGKYGIFQYDGPL 441


>gi|18450371 protein tyrosine phosphatase, receptor type, A isoform
           2 precursor [Homo sapiens]
          Length = 793

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 134 IDYFDVFKESKEQNFYGSQE-SIIALCTHLQQLIRTIEDLDENQLKDEFFKLLQISLWGN 192
           + Y  +++   E   YG  E  + +L THLQ++   I     N L++EF KL  I +  +
Sbjct: 480 MQYVFIYQALLEHYLYGDTELEVTSLETHLQKIYNKIPGTSNNGLEEEFKKLTSIKIQND 539

Query: 193 K 193
           K
Sbjct: 540 K 540


>gi|4506303 protein tyrosine phosphatase, receptor type, A isoform 1
           precursor [Homo sapiens]
          Length = 802

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 134 IDYFDVFKESKEQNFYGSQE-SIIALCTHLQQLIRTIEDLDENQLKDEFFKLLQISLWGN 192
           + Y  +++   E   YG  E  + +L THLQ++   I     N L++EF KL  I +  +
Sbjct: 489 MQYVFIYQALLEHYLYGDTELEVTSLETHLQKIYNKIPGTSNNGLEEEFKKLTSIKIQND 548

Query: 193 K 193
           K
Sbjct: 549 K 549


>gi|18450369 protein tyrosine phosphatase, receptor type, A isoform
           2 precursor [Homo sapiens]
          Length = 793

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 134 IDYFDVFKESKEQNFYGSQE-SIIALCTHLQQLIRTIEDLDENQLKDEFFKLLQISLWGN 192
           + Y  +++   E   YG  E  + +L THLQ++   I     N L++EF KL  I +  +
Sbjct: 480 MQYVFIYQALLEHYLYGDTELEVTSLETHLQKIYNKIPGTSNNGLEEEFKKLTSIKIQND 539

Query: 193 K 193
           K
Sbjct: 540 K 540


>gi|8922256 estrogen-related receptor beta like 1 [Homo sapiens]
          Length = 429

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 10/77 (12%)

Query: 33  IDTLHRHKSEFFEKHGEEGVE-AEKKAISLLSKLRNELQTDKPFIPLVEKFVDTDIWNQY 91
           +D +H+H+S         G+E A K+    L KL NE+      I   EK+++  + N  
Sbjct: 265 VDQMHQHRS---------GIESALKETKGFLDKLHNEITRTLEKISSREKYINNQLENLV 315

Query: 92  LEYQQSLLNESDGKSRW 108
            EY+ +    S+ K R+
Sbjct: 316 QEYRAAQAQLSEAKERY 332


>gi|74319833 ubiquitin specific protease 9, Y-linked [Homo sapiens]
          Length = 2555

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 55/291 (18%), Positives = 108/291 (37%), Gaps = 49/291 (16%)

Query: 140 FKESKEQNFYGSQESIIALCTHLQQLIRTIEDLDENQLKDEFFKLLQI--SLWGNKCDLS 197
           F+   ++ F GS  +I  +   ++   +  E L ++ LK  F  +++I   L  N  D  
Sbjct: 235 FQILHDRFFNGSALNIQIIAALIKPFGQCYEFLSQHTLKKYFIPVIEIVPHLLENLTDEE 294

Query: 198 LSGGESSSQNTNVLNSLEDLKPFILLNDMEHLWSLLSNCKKTREKASATRVYIVLDNSGF 257
           L     +    + L+        +++  +++L S +S   +T +     R+ ++L     
Sbjct: 295 LKKEAKNEAKNDALS--------MIIKSLKNLASRISGQDETIKNLEIFRLKMIL----- 341

Query: 258 ELVTDLILADFLLSSELATEVHFYGKTIPWFVSDTTIHDFNWLIEQVKHSNHKWMSKCGA 317
                           L     F GK          +++ N +I  V +  H+  +    
Sbjct: 342 ---------------RLLQISSFNGKM-------NALNEINKVISSVSYYTHRHSNPEEE 379

Query: 318 DWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAHLILFKGDLNYRKLTGDR 377
           +W    +M +W+  N+I   +  +    PQ    L   L+    ++ +  L  + L  D 
Sbjct: 380 EWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILR---FVIKEKALTLQDL--DN 434

Query: 378 KWEFSVPFHQALNGFHPAPLCTIRTLKAEIQVGLQPGQGEQLLASEPSWWT 428
            W        A  G H A +  +  L A++     PGQ + L     + WT
Sbjct: 435 IW-------AAQAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWT 478


>gi|55770832 cerebellar degeneration-related protein 2 [Homo
           sapiens]
          Length = 454

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 38  RHKSEFFEKHGEEGVEAEKKAISL---LSKLRNELQTDKPFIPLVEKFVDTDIWNQYLEY 94
           +  SE  ++ G  G     +A+ L   ++++R  LQ++ PF+  VEK V   ++  + E 
Sbjct: 228 KENSELEQQLGATGAY-RARALELEAEVAEMRQMLQSEHPFVNGVEKLVPDSLYVPFKEP 286

Query: 95  QQSLLNE 101
            QSLL E
Sbjct: 287 SQSLLEE 293


>gi|157502184 kinesin family member 6 [Homo sapiens]
          Length = 814

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 207 NTNVLNSLEDLKPFILLNDMEHLWS-LLSN 235
           N+  +NSL+  KPF+  +D +H WS LLSN
Sbjct: 696 NSPAVNSLDHTKPFLQTSDSQHEWSQLLSN 725


>gi|211059425 hypothetical protein LOC284422 [Homo sapiens]
          Length = 130

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 258 ELVTDLILADFLLSSELATEVHFYGKTIPWFVSDTTIHDFNWLIEQVKHSNHKWMSKCGA 317
           E +  L++ +FLL S +  +     +  PW V    +  F +++  V  +N  W SK  A
Sbjct: 2   ETLGALLVLEFLLLSPVEAQQATEHRLKPWLVGLAAVVGFLFIVYLVLLANRLWCSKARA 61

Query: 318 DWEE 321
           + EE
Sbjct: 62  EDEE 65


>gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]
          Length = 292

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 11/61 (18%)

Query: 303 QVKHSNHKWMSKCGADWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAHLI 362
           ++ HSN    + C  +W E+     W  H+   W    +YC           +L+ AHL+
Sbjct: 146 ELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYC-----------QLENAHLV 194

Query: 363 L 363
           +
Sbjct: 195 V 195


>gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]
          Length = 287

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 11/61 (18%)

Query: 303 QVKHSNHKWMSKCGADWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAHLI 362
           ++ HSN    + C  +W E+     W  H+   W    +YC           +L+ AHL+
Sbjct: 141 ELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYC-----------QLENAHLV 189

Query: 363 L 363
           +
Sbjct: 190 V 190


>gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 11/61 (18%)

Query: 303 QVKHSNHKWMSKCGADWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAHLI 362
           ++ HSN    + C  +W E+     W  H+   W    +YC           +L+ AHL+
Sbjct: 165 ELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYC-----------QLENAHLV 213

Query: 363 L 363
           +
Sbjct: 214 V 214


>gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 11/61 (18%)

Query: 303 QVKHSNHKWMSKCGADWEEYIKMGKWVYHNHIFWTLPHEYCAMPQVAPDLYAELQKAHLI 362
           ++ HSN    + C  +W E+     W  H+   W    +YC           +L+ AHL+
Sbjct: 165 ELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYC-----------QLENAHLV 213

Query: 363 L 363
           +
Sbjct: 214 V 214


>gi|9951915 adenosylhomocysteinase isoform 1 [Homo sapiens]
          Length = 432

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 120 MYRRIHEAIIQSPPIDYFDVFKESKEQNFYGSQESII 156
           +Y+ +   I++ P I+  D   +SK  N YG +ES+I
Sbjct: 164 LYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLI 200


>gi|239937451 adenosylhomocysteinase isoform 2 [Homo sapiens]
          Length = 404

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 120 MYRRIHEAIIQSPPIDYFDVFKESKEQNFYGSQESII 156
           +Y+ +   I++ P I+  D   +SK  N YG +ES+I
Sbjct: 136 LYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLI 172


>gi|4826870 nucleobindin 2 [Homo sapiens]
          Length = 420

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 12  DVGSFAYLTIKDRIPQILTKVIDTLHRHKSEFFEKHGEEGVEAEKKAISLLSKLRNELQT 71
           DV S  +L  +  +  + TK ++ ++  K+E      ++ VE E++ + +   + NE+ T
Sbjct: 254 DVNSDGFLD-EQELEALFTKELEKVYDPKNE-----EDDMVEMEEERLRMREHVMNEVDT 307

Query: 72  DKPFIPLVEKFVDTDIWNQYLE 93
           +K  +  +E+F+      ++LE
Sbjct: 308 NKDRLVTLEEFLKATEKKEFLE 329


>gi|41872646 cullin 7 [Homo sapiens]
          Length = 1698

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 13/88 (14%)

Query: 219 PFILLND-----MEHL-----WSLLSNCKKTREKASATRVYIVLDNSGFELVTDLILADF 268
           P++L  D      EHL     W LL   KK         + I+ +N   E++ D ILA+ 
Sbjct: 474 PYVLPEDEDTEECEHLTLAEWWELLFFIKKLDGPDHQEVLQILQENLDGEILDDEILAEL 533

Query: 269 LLSSELATEVHFYGKTIPWFVSDTTIHD 296
            +  ELA ++     T+P  ++D+ + D
Sbjct: 534 AVPIELAQDLLL---TLPQRLNDSALRD 558


>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
          Length = 796

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 204 SSQNTNVLNSLEDLKPFILLNDMEHLWSLLSNCKKTREKASATRVYIVLDNSG 256
           S  N  V+ S+E+  PF L   +E+ ++L+S     RE  S   + I + + G
Sbjct: 375 SGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNITITITDLG 427


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,017,051
Number of Sequences: 37866
Number of extensions: 743398
Number of successful extensions: 1735
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1724
Number of HSP's gapped (non-prelim): 18
length of query: 441
length of database: 18,247,518
effective HSP length: 105
effective length of query: 336
effective length of database: 14,271,588
effective search space: 4795253568
effective search space used: 4795253568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.