Guide to the Human Genome
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Name: C6orf211 Sequence: fasta or formatted (441aa) NCBI GI: 13375746
Description:

hypothetical protein LOC79624

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         20           1
 C cysteine            1.6          7           1
 D aspartate           5.7         25           1
 E glutamate           7.7         34           2
 F phenylalanine       5.2         23           2
 G glycine             5.0         22           2
 H histidine           3.6         16           1
 I isoleucine          6.3         28           2
 K lysine              7.0         31           2
 L leucine            12.2         54           2
 M methionine          1.4          6           1
 N asparagine          3.9         17           1
 P proline             4.1         18           2
 Q glutamine           5.2         23           2
 R arginine            2.7         12           2
 S serine              7.5         33           3
 T threonine           4.8         21           2
 V valine              4.5         20           2
 W tryptophan          3.2         14           2
 Y tyrosine            3.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79624 
PTPRA                 0.011   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.011   protein tyrosine phosphatase, receptor type, A isofor...
PTPRA                 0.011   protein tyrosine phosphatase, receptor type, A isofo...
IFT57                 0.010   estrogen-related receptor beta like 1 
USP9Y                 0.009   ubiquitin specific protease 9, Y-linked 
CDR2                  0.008   cerebellar degeneration-related protein 2 
KIF6                  0.008   kinesin family member 6 
LOC284422             0.007   hypothetical protein LOC284422 
ASGR2                 0.006   asialoglycoprotein receptor 2 isoform c 
ASGR2                 0.006   asialoglycoprotein receptor 2 isoform b 
ASGR2                 0.006   asialoglycoprotein receptor 2 isoform a 
ASGR2                 0.006   asialoglycoprotein receptor 2 isoform a 
AHCY                  0.004   adenosylhomocysteinase isoform 1 
AHCY                  0.004   adenosylhomocysteinase isoform 2 
NUCB2                 0.004   nucleobindin 2 
CUL7                  0.004   cullin 7 
PCDHB3                0.004   protocadherin beta 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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