Search of human proteins with 13375618

Search of human proteins with 13375618

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13375618 24-dehydrocholesterol reductase precursor [Homo
sapiens]
         (516 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13375618 24-dehydrocholesterol reductase precursor [Homo sapi...  1073   0.0  
gi|37595756 D-lactate dehydrogenase isoform 2 precursor [Homo sa...    36   0.096
gi|74272280 aryl hydrocarbon receptor interacting protein-like 1...    32   1.8  
gi|74272278 aryl hydrocarbon receptor interacting protein-like 1...    32   1.8  
gi|74272276 aryl hydrocarbon receptor interacting protein-like 1...    32   1.8  
gi|91208435 elongation protein 4 homolog [Homo sapiens]                31   3.1  
gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo ...    30   4.1  
gi|37595754 D-lactate dehydrogenase isoform 1 precursor [Homo sa...    30   4.1  
gi|4885503 myosin IA [Homo sapiens]                                    30   6.9  
gi|30023836 cytochrome P450 4Z1 [Homo sapiens]                         30   6.9  

>gi|13375618 24-dehydrocholesterol reductase precursor [Homo
           sapiens]
          Length = 516

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 516/516 (100%), Positives = 516/516 (100%)

Query: 1   MEPAVSLAVCALLFLLWVRLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKL 60
           MEPAVSLAVCALLFLLWVRLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKL
Sbjct: 1   MEPAVSLAVCALLFLLWVRLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKL 60

Query: 61  SSAPRLHEQRVRDIQKQVREWKEQGSKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLMD 120
           SSAPRLHEQRVRDIQKQVREWKEQGSKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLMD
Sbjct: 61  SSAPRLHEQRVRDIQKQVREWKEQGSKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLMD 120

Query: 121 ILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKY 180
           ILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKY
Sbjct: 121 ILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKY 180

Query: 181 GLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL 240
           GLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL
Sbjct: 181 GLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL 240

Query: 241 RFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVMTDEAEPSKLNSIGNYY 300
           RFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVMTDEAEPSKLNSIGNYY
Sbjct: 241 RFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVMTDEAEPSKLNSIGNYY 300

Query: 301 KPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFGWMVP 360
           KPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFGWMVP
Sbjct: 301 KPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFGWMVP 360

Query: 361 PKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTFQNDIHVYPIWLCPFILPSQ 420
           PKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTFQNDIHVYPIWLCPFILPSQ
Sbjct: 361 PKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTFQNDIHVYPIWLCPFILPSQ 420

Query: 421 PGLVHPKGNEAELYIDIGAYGEPRVKHFEARSCMRQLEKFVRSVHGFQMLYADCYMNREE 480
           PGLVHPKGNEAELYIDIGAYGEPRVKHFEARSCMRQLEKFVRSVHGFQMLYADCYMNREE
Sbjct: 421 PGLVHPKGNEAELYIDIGAYGEPRVKHFEARSCMRQLEKFVRSVHGFQMLYADCYMNREE 480

Query: 481 FWEMFDGSLYHKLREKLGCQDAFPEVYDKICKAARH 516
           FWEMFDGSLYHKLREKLGCQDAFPEVYDKICKAARH
Sbjct: 481 FWEMFDGSLYHKLREKLGCQDAFPEVYDKICKAARH 516


>gi|37595756 D-lactate dehydrogenase isoform 2 precursor [Homo
           sapiens]
          Length = 484

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 12/132 (9%)

Query: 114 IMINL--MD-ILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMG 170
           + +NL  MD ILE++ +   V VEP VT   + A L   G   PV P  D    G    G
Sbjct: 112 VCVNLTHMDRILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGADASLCGMAATG 171

Query: 171 TGIESSSHKYGLFQHICTAYELVLADGSFVRCT--------PSENSDLFYAVPWSCGTLG 222
               +++ +YG  +      E+VL DG  +            +   +L      S GTLG
Sbjct: 172 AS-GTNAVRYGTMRDNVLNLEVVLPDGRLLHTAGRGRHFRKSAAGYNLTGLFVGSEGTLG 230

Query: 223 FLVAAEIRIIPA 234
            + A  +R+ PA
Sbjct: 231 LITATTLRLHPA 242


>gi|74272280 aryl hydrocarbon receptor interacting protein-like 1
           isoform 3 [Homo sapiens]
          Length = 324

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 14/75 (18%)

Query: 423 LVHPKGNEAELYIDIGAYGEPRVKHFEARSCMRQLE-----------KFVRSVHGFQMLY 471
           ++H +GN       +G Y E   K+ EA  C+R L+           K  + ++   + Y
Sbjct: 120 VLHGEGNRL---FKLGRYEEASSKYQEAIICLRNLQTKEKPWEVQWLKLEKMINTLILNY 176

Query: 472 ADCYMNREEFWEMFD 486
             C + +EE++E+ +
Sbjct: 177 CQCLLKKEEYYEVLE 191


>gi|74272278 aryl hydrocarbon receptor interacting protein-like 1
           isoform 2 [Homo sapiens]
          Length = 321

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 14/75 (18%)

Query: 423 LVHPKGNEAELYIDIGAYGEPRVKHFEARSCMRQLE-----------KFVRSVHGFQMLY 471
           ++H +GN       +G Y E   K+ EA  C+R L+           K  + ++   + Y
Sbjct: 117 VLHGEGNRL---FKLGRYEEASSKYQEAIICLRNLQTKEKPWEVQWLKLEKMINTLILNY 173

Query: 472 ADCYMNREEFWEMFD 486
             C + +EE++E+ +
Sbjct: 174 CQCLLKKEEYYEVLE 188


>gi|74272276 aryl hydrocarbon receptor interacting protein-like 1
           isoform 1 [Homo sapiens]
          Length = 384

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 14/75 (18%)

Query: 423 LVHPKGNEAELYIDIGAYGEPRVKHFEARSCMRQLE-----------KFVRSVHGFQMLY 471
           ++H +GN       +G Y E   K+ EA  C+R L+           K  + ++   + Y
Sbjct: 180 VLHGEGNRL---FKLGRYEEASSKYQEAIICLRNLQTKEKPWEVQWLKLEKMINTLILNY 236

Query: 472 ADCYMNREEFWEMFD 486
             C + +EE++E+ +
Sbjct: 237 CQCLLKKEEYYEVLE 251


>gi|91208435 elongation protein 4 homolog [Homo sapiens]
          Length = 424

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 130 IVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTA 189
           I    P V  GQ   LL S G     LP LD L  GGL +GT +     KY ++  +   
Sbjct: 49  IAGTRPSVRNGQ---LLVSTG-----LPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFK 100

Query: 190 YELVLADG 197
           Y   LA+G
Sbjct: 101 Y--FLAEG 106


>gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo
           sapiens]
          Length = 521

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 179 KYGLFQHICTAYELVLADGSFVRCTPS---ENS--DLFYAVPWSCGTLGFLVAAEIRIIP 233
           +YG         E+VLADG+ + C  S   +N+  DL      S GTLG +    I   P
Sbjct: 215 RYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPP 274

Query: 234 AKKYVKLRFEPVRGLEAICAKFT 256
             + V + F    G   +   F+
Sbjct: 275 KPRAVNVAFLGCPGFAEVLQTFS 297


>gi|37595754 D-lactate dehydrogenase isoform 1 precursor [Homo
           sapiens]
          Length = 507

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 114 IMINL--MD-ILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMG 170
           + +NL  MD ILE++ +   V VEP VT   + A L   G   PV P  D    G    G
Sbjct: 112 VCVNLTHMDRILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGADASLCGMAATG 171

Query: 171 TGIESSSHKYGLFQHICTAYELVLADG 197
               +++ +YG  +      E+VL DG
Sbjct: 172 AS-GTNAVRYGTMRDNVLNLEVVLPDG 197


>gi|4885503 myosin IA [Homo sapiens]
          Length = 1043

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 265 HFVEGLLYSLDEAVIMTGVMTDEAEPSKLNSIGNYYKPWFFKHVENYLK--TNREGLEYI 322
           H   G+L  LDE  +  GV++D    +KLN + + +  +  K  +N  +   +  GL   
Sbjct: 444 HNQRGILAMLDEECLRPGVVSDSTFLAKLNQLFSKHGHYESKVTQNAQRQYDHTMGLSCF 503

Query: 323 PLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFGWMVPPKISLLK 367
            + HY  + T    + +   I   N+ +FR L   M   +  LL+
Sbjct: 504 RICHYAGKVT----YNVTSFIDKNNDLLFRDLLQAMWKAQHPLLR 544


>gi|30023836 cytochrome P450 4Z1 [Homo sapiens]
          Length = 505

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 461 VRSVHGFQMLYADCYMNREEFWEMFDGSLYHKLREKLGC 499
           +R++H F    A  +   +EF+ + +  +YHKL EK  C
Sbjct: 40  IRALHLFPAPPAHWFYGHKEFYPVKEFEVYHKLMEKYPC 78


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.141    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,973,291
Number of Sequences: 37866
Number of extensions: 881981
Number of successful extensions: 2301
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2299
Number of HSP's gapped (non-prelim): 10
length of query: 516
length of database: 18,247,518
effective HSP length: 107
effective length of query: 409
effective length of database: 14,195,856
effective search space: 5806105104
effective search space used: 5806105104
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.