Guide to the Human Genome
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Name: NDUFS2 Sequence: fasta or formatted (463aa) NCBI GI: 4758786
Description:

NADH dehydrogenase (ubiquinone) Fe-S protein 2

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         34           2
 C cysteine            1.5          7           1
 D aspartate           5.6         26           2
 E glutamate           6.3         29           2
 F phenylalanine       3.9         18           2
 G glycine             7.8         36           2
 H histidine           2.8         13           2
 I isoleucine          5.2         24           2
 K lysine              4.8         22           1
 L leucine             9.3         43           2
 M methionine          3.9         18           2
 N asparagine          2.6         12           2
 P proline             6.7         31           3
 Q glutamine           4.1         19           2
 R arginine            7.1         33           1
 S serine              4.1         19           2
 T threonine           3.9         18           2
 V valine              7.3         34           2
 W tryptophan          1.7          8           1
 Y tyrosine            4.1         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase (ubiquinone) Fe-S protein 2 
FBXO22                0.011   F-box only protein 22 isoform a 
FBXO22                0.011   F-box only protein 22 isoform b 
FLJ32682              0.009   hypothetical protein LOC220081 
IL27RA                0.005   class I cytokine receptor 
SF1                   0.005   splicing factor 1 isoform 3 
SF1                   0.005   splicing factor 1 isoform 2 
SF1                   0.005   splicing factor 1 isoform 1 
LOC100133142          0.004   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.004   PREDICTED: similar to zinc finger protein 208 [Homo...
CCNDBP1               0.004   cyclin D-type binding-protein 1 isoform 2 
CCNDBP1               0.004   cyclin D-type binding-protein 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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