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Search of human proteins with 4758484
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens] 497 e-141
gi|38016131 glutathione S-transferase omega 2 [Homo sapiens] 326 1e-89
gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens] 61 1e-09
gi|22202622 glutathione transferase zeta 1 isoform 3 [Homo sapiens] 45 6e-05
gi|7330335 chloride intracellular channel 4 [Homo sapiens] 42 6e-04
gi|82617632 chloride intracellular channel 5 isoform b [Homo sap... 40 0.002
gi|166197662 chloride intracellular channel 5 isoform a [Homo sa... 40 0.002
gi|66346733 chloride intracellular channel 2 [Homo sapiens] 39 0.005
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 35 0.058
gi|108773797 ganglioside-induced differentiation-associated prot... 35 0.076
gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens] 34 0.099
gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] 34 0.099
gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 34 0.099
gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens] 34 0.099
gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens] 34 0.099
gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens] 34 0.099
gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] 34 0.099
gi|14251209 chloride intracellular channel 1 [Homo sapiens] 33 0.22
gi|4503481 eukaryotic translation elongation factor 1 gamma [Hom... 32 0.38
gi|30581160 ganglioside-induced differentiation-associated prote... 31 0.84
gi|23065544 glutathione S-transferase mu 1 isoform 1 [Homo sapiens] 31 1.1
gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 30 1.9
gi|21536402 bridging integrator 1 isoform 2 [Homo sapiens] 30 1.9
gi|21536400 bridging integrator 1 isoform 1 [Homo sapiens] 30 1.9
gi|23065552 glutathione S-transferase mu 3 [Homo sapiens] 29 3.2
gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens] 29 3.2
gi|14043022 methionyl-tRNA synthetase [Homo sapiens] 28 7.1
>gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
Length = 241
Score = 497 bits (1279), Expect = e-141
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP 60
MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
Sbjct: 1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP 60
Query: 61 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF 120
EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
Sbjct: 61 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF 120
Query: 121 SKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW 180
SKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW
Sbjct: 121 SKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW 180
Query: 181 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG 240
FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
Sbjct: 181 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG 240
Query: 241 L 241
L
Sbjct: 241 L 241
>gi|38016131 glutathione S-transferase omega 2 [Homo sapiens]
Length = 243
Score = 326 bits (836), Expect = 1e-89
Identities = 155/242 (64%), Positives = 188/242 (77%), Gaps = 1/242 (0%)
Query: 1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP 60
MSG++ R+LGKGS PPGPVPEG IRIYSMRFCP++ RTRLVLKAK IRHEV+NINL+NKP
Sbjct: 1 MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLVLKAKDIRHEVVNINLRNKP 60
Query: 61 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF 120
EW++ K+PFG +PVLE SQ QLIYES I CEYLD+AYPG+KL P DPYE+A QKM+LELF
Sbjct: 61 EWYYTKHPFGHIPVLETSQCQLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELF 120
Query: 121 SKVPSLVGS-FIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWP 179
KVP L + + + LK R+EF+ LEE+L + TTFFGG ISMIDYL+WP
Sbjct: 121 CKVPHLTKECLVALRCGRECTNLKAALRQEFSNLEEILEYQNTTFFGGTCISMIDYLLWP 180
Query: 180 WFERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDY 239
WFERL+ + +CV HTP L+LW++AMK DPTV ALL + +QGFL LY QN+P A D+
Sbjct: 181 WFERLDVYGILDCVSHTPALRLWISAMKWDPTVCALLMDKSIFQGFLNLYFQNNPNAFDF 240
Query: 240 GL 241
GL
Sbjct: 241 GL 242
>gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]
Length = 216
Score = 60.8 bits (146), Expect = 1e-09
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 25/175 (14%)
Query: 37 RTRLVLKAKGIRHEVININL-KNKPEWFFKK----NPFGLVPVLENSQGQLIYESAITCE 91
R R+ L KGI +E + INL K+ + F K NP VP L+ G I++S E
Sbjct: 19 RVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVPTLK-IDGITIHQSLAIIE 77
Query: 92 YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKE-- 149
YL+E P +LLP DP ++A +MI +L + G QN + EE +
Sbjct: 78 YLEEMRPTPRLLPQDPKKRASVRMISDL------IAGGIQPLQNLSVLKQVGEEMQLTWA 131
Query: 150 -------FTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNECVDHTP 197
F LE++L + + G+ ++M D + P E K VD TP
Sbjct: 132 QNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQVANAERFK----VDLTP 182
>gi|22202622 glutathione transferase zeta 1 isoform 3 [Homo sapiens]
Length = 161
Score = 45.1 bits (105), Expect = 6e-05
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
Query: 72 VPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFI 131
VP L+ G I++S EYL+E P +LLP DP ++A +MI +L + G
Sbjct: 4 VPTLK-IDGITIHQSLAIIEYLEEMRPTPRLLPQDPKKRASVRMISDL------IAGGIQ 56
Query: 132 RSQNKEDYAGLKEEFRKE---------FTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFE 182
QN + EE + F LE++L + + G+ ++M D + P
Sbjct: 57 PLQNLSVLKQVGEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQVA 116
Query: 183 RLEAMKLNECVDHTP 197
E K VD TP
Sbjct: 117 NAERFK----VDLTP 127
>gi|7330335 chloride intracellular channel 4 [Homo sapiens]
Length = 253
Score = 41.6 bits (96), Expect = 6e-04
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 7/177 (3%)
Query: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91
CPF++R ++L KG+ V ++LK KP P G P ++ + E
Sbjct: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVNKIEE 93
Query: 92 YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFT 151
+L+E K L P +++F+K ++I++ E L+ K
Sbjct: 94 FLEEVLCPPKYLKLSPKHPESNTAGMDIFAK----FSAYIKNSRPEANEALERGLLKTLQ 149
Query: 152 KLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNECVDHTPKLKLWMAAMKE 208
KL+E L + NS+ I + + + E M L +C + PKL + K+
Sbjct: 150 KLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNE-MTLADC-NLLPKLHIVKVVAKK 204
>gi|82617632 chloride intracellular channel 5 isoform b [Homo
sapiens]
Length = 251
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91
CPF++R ++L KG+ V ++LK KP P G P G + + E
Sbjct: 32 CPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP-GTHPPFLTFNGDVKTDVNKIEE 90
Query: 92 YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFT 151
+L+E +K + +++FSK ++I++ +++ A L+ K
Sbjct: 91 FLEETLTPEKYPKLAAKHRESNTAGIDIFSK----FSAYIKNTKQQNNAALERGLTKALK 146
Query: 152 KLEEVL 157
KL++ L
Sbjct: 147 KLDDYL 152
>gi|166197662 chloride intracellular channel 5 isoform a [Homo
sapiens]
Length = 410
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91
CPF++R ++L KG+ V ++LK KP P G P G + + E
Sbjct: 191 CPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP-GTHPPFLTFNGDVKTDVNKIEE 249
Query: 92 YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFT 151
+L+E +K + +++FSK ++I++ +++ A L+ K
Sbjct: 250 FLEETLTPEKYPKLAAKHRESNTAGIDIFSK----FSAYIKNTKQQNNAALERGLTKALK 305
Query: 152 KLEEVL 157
KL++ L
Sbjct: 306 KLDDYL 311
>gi|66346733 chloride intracellular channel 2 [Homo sapiens]
Length = 247
Score = 38.5 bits (88), Expect = 0.005
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91
CPF +R ++L KG++ V +++ KPE P P L ++ +L + E
Sbjct: 30 CPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNPPFLVYNK-ELKTDFIKIEE 88
Query: 92 YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFT 151
+L++ + P K + LF+K ++I++ KE ++ KEF
Sbjct: 89 FLEQTLAPPRYPHLSPKYKESFDVGCNLFAK----FSAYIKNTQKEANKNFEKSLLKEFK 144
Query: 152 KLEEVL 157
+L++ L
Sbjct: 145 RLDDYL 150
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 35.0 bits (79), Expect = 0.058
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 28/176 (15%)
Query: 2 SGESARSLGK-----GSAPPGPVPEGSIRIY--------SMRFCPFAERTRLVLKAKGIR 48
SGE+AR G+ S P E I ++ S+ CPF++R ++L KG+
Sbjct: 426 SGEAARVNGRREDGEASEPRALGQEHDITLFVKAGYDGESIGNCPFSQRLFMILWLKGVI 485
Query: 49 HEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDE-----AYPGKKLL 103
V ++LK KP P G P G++ + E+L+E YP KL
Sbjct: 486 FNVTTVDLKRKPADLQNLAP-GTNPPFMTFDGEVKTDVNKIEEFLEEKLAPPRYP--KLG 542
Query: 104 PDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTN 159
P + + FS +FI++ K+ ++ K KL+ L +
Sbjct: 543 TQHPESNSAGNDVFAKFS-------AFIKNTKKDANEIHEKNLLKALRKLDNYLNS 591
>gi|108773797 ganglioside-induced differentiation-associated protein
1 isoform a [Homo sapiens]
Length = 358
Score = 34.7 bits (78), Expect = 0.076
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 35 AERTRLVLKAKGIRHEVININLK----NKPEWFFKKNPFGLVPVLENSQGQLIYESAITC 90
+++ RLV+ K ++ E +++L N+P WF + N G VPVL + + +I E+
Sbjct: 37 SQKVRLVIAEKALKCEEHDVSLPLSEHNEP-WFMRLNSTGEVPVLIHGE-NIICEATQII 94
Query: 91 EYLDEAYPGK---KLLPD 105
+YL++ + + +L+PD
Sbjct: 95 DYLEQTFLDERTPRLMPD 112
>gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens]
Length = 409
Score = 34.3 bits (77), Expect = 0.099
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 84 YESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSL----VGSFIRSQNKEDY 139
YES T + DEA K +K ++M ++L ++PSL VG ++ + +
Sbjct: 157 YESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSI 214
Query: 140 AGLKEEFRKEFTKLEEVLTN 159
AGL+E F KE +KL + L +
Sbjct: 215 AGLEENFHKEMSKLNQNLND 234
>gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens]
Length = 439
Score = 34.3 bits (77), Expect = 0.099
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 84 YESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSL----VGSFIRSQNKEDY 139
YES T + DEA K +K ++M ++L ++PSL VG ++ + +
Sbjct: 157 YESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSI 214
Query: 140 AGLKEEFRKEFTKLEEVLTN 159
AGL+E F KE +KL + L +
Sbjct: 215 AGLEENFHKEMSKLNQNLND 234
>gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens]
Length = 475
Score = 34.3 bits (77), Expect = 0.099
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 84 YESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSL----VGSFIRSQNKEDY 139
YES T + DEA K +K ++M ++L ++PSL VG ++ + +
Sbjct: 157 YESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSI 214
Query: 140 AGLKEEFRKEFTKLEEVLTN 159
AGL+E F KE +KL + L +
Sbjct: 215 AGLEENFHKEMSKLNQNLND 234
>gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens]
Length = 482
Score = 34.3 bits (77), Expect = 0.099
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 84 YESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSL----VGSFIRSQNKEDY 139
YES T + DEA K +K ++M ++L ++PSL VG ++ + +
Sbjct: 157 YESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSI 214
Query: 140 AGLKEEFRKEFTKLEEVLTN 159
AGL+E F KE +KL + L +
Sbjct: 215 AGLEENFHKEMSKLNQNLND 234
>gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens]
Length = 518
Score = 34.3 bits (77), Expect = 0.099
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 84 YESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSL----VGSFIRSQNKEDY 139
YES T + DEA K +K ++M ++L ++PSL VG ++ + +
Sbjct: 157 YESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSI 214
Query: 140 AGLKEEFRKEFTKLEEVLTN 159
AGL+E F KE +KL + L +
Sbjct: 215 AGLEENFHKEMSKLNQNLND 234
>gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens]
Length = 497
Score = 34.3 bits (77), Expect = 0.099
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 84 YESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSL----VGSFIRSQNKEDY 139
YES T + DEA K +K ++M ++L ++PSL VG ++ + +
Sbjct: 157 YESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSI 214
Query: 140 AGLKEEFRKEFTKLEEVLTN 159
AGL+E F KE +KL + L +
Sbjct: 215 AGLEENFHKEMSKLNQNLND 234
>gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens]
Length = 454
Score = 34.3 bits (77), Expect = 0.099
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 84 YESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSL----VGSFIRSQNKEDY 139
YES T + DEA K +K ++M ++L ++PSL VG ++ + +
Sbjct: 157 YESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSI 214
Query: 140 AGLKEEFRKEFTKLEEVLTN 159
AGL+E F KE +KL + L +
Sbjct: 215 AGLEENFHKEMSKLNQNLND 234
>gi|14251209 chloride intracellular channel 1 [Homo sapiens]
Length = 241
Score = 33.1 bits (74), Expect = 0.22
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVL 75
CPF++R +VL KG+ V ++ K + E K P G +P L
Sbjct: 24 CPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFL 67
>gi|4503481 eukaryotic translation elongation factor 1 gamma [Homo
sapiens]
Length = 437
Score = 32.3 bits (72), Expect = 0.38
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 20/141 (14%)
Query: 58 NKPEWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMIL 117
N+ F +K P G VP E G ++ES Y+ ++L P E A Q +
Sbjct: 44 NRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTP-EAAAQVVQW 98
Query: 118 ELFSK----VPSLVGSF----IRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNS 169
F+ P+ F I NK+ KEE R+ L+ L K TF G
Sbjct: 99 VSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYL--KTRTFLVGER 156
Query: 170 ISMIDY-----LIWPWFERLE 185
+++ D L+W + + LE
Sbjct: 157 VTLADITVVCTLLWLYKQVLE 177
>gi|30581160 ganglioside-induced differentiation-associated protein
1-like 1 [Homo sapiens]
Length = 367
Score = 31.2 bits (69), Expect = 0.84
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 13 SAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININL---KNKPEWFFKKNPF 69
+A P P S+ +Y +++ RLV+ KG+ E +++L ++K WF + N
Sbjct: 36 AASPAHWPRESLVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLG 95
Query: 70 GLVPVLENSQGQLIYESAITCEYLDEAYPGKKLL 103
VPV+ + + +I + +Y++ + G+ ++
Sbjct: 96 EEVPVIIH-RDNIISDYDQIIDYVERTFTGEHVV 128
>gi|23065544 glutathione S-transferase mu 1 isoform 1 [Homo sapiens]
Length = 218
Score = 30.8 bits (68), Expect = 1.1
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 145 EFRKEFTKLEEVLTNK---------KTTFFGGNSISMIDYLIWPWFERLEAMKLNECVDH 195
EF K K E L K K +F GN I+ +D+L++ + L + +C+D
Sbjct: 119 EFEKLKPKYLEELPEKLKLYSEFLGKRPWFAGNKITFVDFLVYDVLD-LHRIFEPKCLDA 177
Query: 196 TPKLKLWMAAMKEDPTVSALLTSEK 220
P LK +++ + +SA + S +
Sbjct: 178 FPNLKDFISRFEGLEKISAYMKSSR 202
>gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens]
Length = 506
Score = 30.0 bits (66), Expect = 1.9
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 109 EKACQKMILELFSKVPSL----VGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTN 159
+K ++M ++L ++PSL VG ++ + + AGL+E F KE +KL + L +
Sbjct: 213 QKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSIAGLEENFHKEMSKLNQNLND 265
>gi|21536402 bridging integrator 1 isoform 2 [Homo sapiens]
Length = 550
Score = 30.0 bits (66), Expect = 1.9
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 109 EKACQKMILELFSKVPSL----VGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTN 159
+K ++M ++L ++PSL VG ++ + + AGL+E F KE +KL + L +
Sbjct: 213 QKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSIAGLEENFHKEMSKLNQNLND 265
>gi|21536400 bridging integrator 1 isoform 1 [Homo sapiens]
Length = 593
Score = 30.0 bits (66), Expect = 1.9
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 109 EKACQKMILELFSKVPSL----VGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTN 159
+K ++M ++L ++PSL VG ++ + + AGL+E F KE +KL + L +
Sbjct: 213 QKVFEEMNVDLQEELPSLWNSRVGFYVNTF--QSIAGLEENFHKEMSKLNQNLND 265
>gi|23065552 glutathione S-transferase mu 3 [Homo sapiens]
Length = 225
Score = 29.3 bits (64), Expect = 3.2
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 131 IRSQNKEDYAGLKEEFRKEFT-KLEEV-LTNKKTTFFGGNSISMIDYLIWPWFERLEAMK 188
IR D+ LK ++ +E +L++ + K ++F G ++ +D+L + ++
Sbjct: 116 IRLCYSSDHEKLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIFD 175
Query: 189 LNECVDHTPKLKLWMAAMKEDPTVSALLTSEK 220
+C+D P LK +M + ++A L S++
Sbjct: 176 -PKCLDEFPNLKAFMCRFEALEKIAAYLQSDQ 206
>gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]
Length = 1430
Score = 29.3 bits (64), Expect = 3.2
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 181 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTS------EKDWQGFL 226
F++L +MKL+ C + K W + + T + L+S E DWQG L
Sbjct: 627 FKKLLSMKLSICFMKSDFQKFWSKSSQLGDTTTGHLSSGEQKGIESDWQGLL 678
>gi|14043022 methionyl-tRNA synthetase [Homo sapiens]
Length = 900
Score = 28.1 bits (61), Expect = 7.1
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query: 72 VPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKV-PSLVGSF 130
VPVL+ G ++ ++ C Y ++ DD + + EL + +L
Sbjct: 48 VPVLQLDSGNYLFSTSAICRYFFLLSGWEQ---DDLTNQWLEWEATELQPALSAALYYLV 104
Query: 131 IRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIW 178
++ + ED G R+ T ++ L+ + F G + S+ D ++W
Sbjct: 105 VQGKKGEDVLG---SVRRALTHIDHSLSRQNCPFLAGETESLADIVLW 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,880,350
Number of Sequences: 37866
Number of extensions: 424404
Number of successful extensions: 1200
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1188
Number of HSP's gapped (non-prelim): 27
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.