Search of human proteins with 47458827

Search of human proteins with 47458827

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47458827 peptidase M20 domain containing 1 [Homo sapiens]
         (502 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|47458827 peptidase M20 domain containing 1 [Homo sapiens]          985   0.0  
gi|239747578 PREDICTED: hypothetical protein XP_002347666 [Homo ...   311   1e-84
gi|4501901 aminoacylase 1 [Homo sapiens]                               59   8e-09
gi|8922699 CNDP dipeptidase 2 [Homo sapiens]                           58   2e-08
gi|21071039 carnosinase 1 [Homo sapiens]                               50   6e-06
gi|40807477 retinoic acid induced 1 [Homo sapiens]                     31   3.0  
gi|110349719 titin isoform N2-A [Homo sapiens]                         30   3.9  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      30   3.9  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      30   3.9  
gi|110349715 titin isoform N2-B [Homo sapiens]                         30   3.9  
gi|110556640 DNA helicase HEL308 [Homo sapiens]                        30   6.7  
gi|4507689 transient receptor potential cation channel, subfamil...    29   8.7  

>gi|47458827 peptidase M20 domain containing 1 [Homo sapiens]
          Length = 502

 Score =  985 bits (2546), Expect = 0.0
 Identities = 502/502 (100%), Positives = 502/502 (100%)

Query: 1   MAQRCVCVLALVAMLLLVFPTVSRSMGPRSGEHQRASRIPSQFSKEERVAMKEALKGAIQ 60
           MAQRCVCVLALVAMLLLVFPTVSRSMGPRSGEHQRASRIPSQFSKEERVAMKEALKGAIQ
Sbjct: 1   MAQRCVCVLALVAMLLLVFPTVSRSMGPRSGEHQRASRIPSQFSKEERVAMKEALKGAIQ 60

Query: 61  IPTVTFSSEKSNTTALAEFGKYIHKVFPTVVSTSFIQHEVVEEYSHLFTIQGSDPSLQPY 120
           IPTVTFSSEKSNTTALAEFGKYIHKVFPTVVSTSFIQHEVVEEYSHLFTIQGSDPSLQPY
Sbjct: 61  IPTVTFSSEKSNTTALAEFGKYIHKVFPTVVSTSFIQHEVVEEYSHLFTIQGSDPSLQPY 120

Query: 121 LLMAHFDVVPAPEEGWEVPPFSGLERDGVIYGRGTLDDKNSVMALLQALELLLIRKYIPR 180
           LLMAHFDVVPAPEEGWEVPPFSGLERDGVIYGRGTLDDKNSVMALLQALELLLIRKYIPR
Sbjct: 121 LLMAHFDVVPAPEEGWEVPPFSGLERDGVIYGRGTLDDKNSVMALLQALELLLIRKYIPR 180

Query: 181 RSFFISLGHDEESSGTGAQRISALLQSRGVQLAFIVDEGGFILDDFIPNFKKPIALIAVS 240
           RSFFISLGHDEESSGTGAQRISALLQSRGVQLAFIVDEGGFILDDFIPNFKKPIALIAVS
Sbjct: 181 RSFFISLGHDEESSGTGAQRISALLQSRGVQLAFIVDEGGFILDDFIPNFKKPIALIAVS 240

Query: 241 EKGSMNLMLQVNMTSGHSSAPPKETSIGILAAAVSRLEQTPMPIIFGSGTVVTVLQQLAN 300
           EKGSMNLMLQVNMTSGHSSAPPKETSIGILAAAVSRLEQTPMPIIFGSGTVVTVLQQLAN
Sbjct: 241 EKGSMNLMLQVNMTSGHSSAPPKETSIGILAAAVSRLEQTPMPIIFGSGTVVTVLQQLAN 300

Query: 301 EFPFPVNIILSNPWLFEPLISRFMERNPLTNAIIRTTTALTIFKAGVKFNVIPPVAQATV 360
           EFPFPVNIILSNPWLFEPLISRFMERNPLTNAIIRTTTALTIFKAGVKFNVIPPVAQATV
Sbjct: 301 EFPFPVNIILSNPWLFEPLISRFMERNPLTNAIIRTTTALTIFKAGVKFNVIPPVAQATV 360

Query: 361 NFRIHPGQTVQEVLELTKNIVADNRVQFHVLSAFDPLPVSPSDDKALGYQLLRQTVQSVF 420
           NFRIHPGQTVQEVLELTKNIVADNRVQFHVLSAFDPLPVSPSDDKALGYQLLRQTVQSVF
Sbjct: 361 NFRIHPGQTVQEVLELTKNIVADNRVQFHVLSAFDPLPVSPSDDKALGYQLLRQTVQSVF 420

Query: 421 PEVNITAPVTSIGNTDSRFFTNLTTGIYRFYPIYIQPEDFKRIHGVNEKISVQAYETQVK 480
           PEVNITAPVTSIGNTDSRFFTNLTTGIYRFYPIYIQPEDFKRIHGVNEKISVQAYETQVK
Sbjct: 421 PEVNITAPVTSIGNTDSRFFTNLTTGIYRFYPIYIQPEDFKRIHGVNEKISVQAYETQVK 480

Query: 481 FIFELIQNADTDQEPVSHLHKL 502
           FIFELIQNADTDQEPVSHLHKL
Sbjct: 481 FIFELIQNADTDQEPVSHLHKL 502


>gi|239747578 PREDICTED: hypothetical protein XP_002347666 [Homo
           sapiens]
          Length = 294

 Score =  311 bits (796), Expect = 1e-84
 Identities = 157/158 (99%), Positives = 158/158 (100%)

Query: 275 SRLEQTPMPIIFGSGTVVTVLQQLANEFPFPVNIILSNPWLFEPLISRFMERNPLTNAII 334
           SRLEQTPMPIIFGSGTVVTVLQQLANEFPFPVNIILSNPWLFEPLISRFMERNPLTNAII
Sbjct: 91  SRLEQTPMPIIFGSGTVVTVLQQLANEFPFPVNIILSNPWLFEPLISRFMERNPLTNAII 150

Query: 335 RTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVADNRVQFHVLSAF 394
           RTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVADNRVQFHVLSAF
Sbjct: 151 RTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVADNRVQFHVLSAF 210

Query: 395 DPLPVSPSDDKALGYQLLRQTVQSVFPEVNITAPVTSI 432
           DPLPVSPSDDKALGYQLLRQTVQSVFPEVNITAPVTS+
Sbjct: 211 DPLPVSPSDDKALGYQLLRQTVQSVFPEVNITAPVTSM 248



 Score =  167 bits (422), Expect = 3e-41
 Identities = 85/85 (100%), Positives = 85/85 (100%)

Query: 1  MAQRCVCVLALVAMLLLVFPTVSRSMGPRSGEHQRASRIPSQFSKEERVAMKEALKGAIQ 60
          MAQRCVCVLALVAMLLLVFPTVSRSMGPRSGEHQRASRIPSQFSKEERVAMKEALKGAIQ
Sbjct: 1  MAQRCVCVLALVAMLLLVFPTVSRSMGPRSGEHQRASRIPSQFSKEERVAMKEALKGAIQ 60

Query: 61 IPTVTFSSEKSNTTALAEFGKYIHK 85
          IPTVTFSSEKSNTTALAEFGKYIHK
Sbjct: 61 IPTVTFSSEKSNTTALAEFGKYIHK 85


>gi|4501901 aminoacylase 1 [Homo sapiens]
          Length = 408

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 44/261 (16%)

Query: 107 LFTIQGSDPSLQPYLLMAHFDVVPAPEEGWEVPPFSGL-ERDGVIYGRGTLDDKNSVMAL 165
           + T  G++P+L   LL +H DVVP  +E W   PF    + +G IY RG  D K   +  
Sbjct: 62  VLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQY 121

Query: 166 LQALELLLIRKYIPRRSFFISLGHDEESSGTGAQRISALLQSRGVQLAFIVDEGGFILDD 225
           L+A+  L +  +   R+  ++   DEE    G Q +   +Q    +  F     GF LD+
Sbjct: 122 LEAVRRLKVEGHRFPRTIHMTFVPDEEVG--GHQGMELFVQ----RPEFHALRAGFALDE 175

Query: 226 FIPNFKKPIALIAVSEKGSMNLMLQVNMTSGHSSAPPKETSIGILAAAVSRLEQTPMPII 285
            I N       +  SE+    + +      GH+S   ++T       A  +L +      
Sbjct: 176 GIAN-PTDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDT-------AAEKLHKV----- 222

Query: 286 FGSGTVVTVLQQLANEFPFPVNIILSNPWLFEPLISRFMERNPLTNAIIRTTTALTIFKA 345
                               VN IL+    F     + ++ NP       T+  LT  + 
Sbjct: 223 --------------------VNSILA----FREKEWQRLQSNPHLKEGSVTSVNLTKLEG 258

Query: 346 GVKFNVIPPVAQATVNFRIHP 366
           GV +NVIP    A+ +FR+ P
Sbjct: 259 GVAYNVIPATMSASFDFRVAP 279


>gi|8922699 CNDP dipeptidase 2 [Homo sapiens]
          Length = 475

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 112 GSDPSLQPYLLMAHFDVVPAP-EEGWEVPPFSGLERDGVIYGRGTLDDKNSVMALLQALE 170
           GSDP  +   +  H DV PA  E+GW+  PF+ +ERDG +YG G+ DDK  V   + ALE
Sbjct: 86  GSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLYGGGSTDDKGPVAGWINALE 145


>gi|21071039 carnosinase 1 [Homo sapiens]
          Length = 507

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 112 GSDPSLQPYLLMAHFDVVPAPE-EGWEVPPFSGLERDGVIYGRGTLDDKNSVMALLQALE 170
           GSDP+        H DV PA   +GW   P+   E DG +YGRG  D+K  V+A + A+ 
Sbjct: 119 GSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVS 178

Query: 171 LL-LIRKYIPRRSFFISLGHDEESS 194
               + + +P    FI  G +E  S
Sbjct: 179 AFRALEQDLPVNIKFIIEGMEEAGS 203


>gi|40807477 retinoic acid induced 1 [Homo sapiens]
          Length = 1906

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 34  QRASRIPSQFSKEERVAMKEALKGAIQIPTVT----FSSEKSNTTALAEFGKYIHKVFPT 89
           ++ + +P  F +EE   +KE   G +Q P V     +  +  +  + A+FG       P 
Sbjct: 801 EKVASLPGDFKQEEVGGVKEEAGGLLQCPEVAKADRWLEDSRHCCSTADFGD-----LPL 855

Query: 90  VVSTSFIQH-EVVEEYSHLFTIQGSDPSLQP 119
           +  TS  +  E  EEYS L  + GS P  +P
Sbjct: 856 LPPTSRKEDLEAEEEYSSLCELLGS-PEQRP 885


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 328   PLT--NAIIRTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVADNR 385
             PLT  +A +  T  L+ FK G++  ++P      V    +P  T        K +   +R
Sbjct: 13383 PLTADDAFVEPTMDLSAFKDGLEV-IVPNPITILVPSTGYPRPTATWCFG-DKVLETGDR 13440

Query: 386   VQFHVLSAFDPLPVSPSD--DKALGYQLLRQTVQSVFPEVNI 425
             V+   LSA+  L +SPS+  DK +    L   V+++  E+++
Sbjct: 13441 VKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDV 13482


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 328  PLT--NAIIRTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVADNR 385
            PLT  +A +  T  L+ FK G++  ++P      V    +P  T        K +   +R
Sbjct: 7078 PLTADDAFVEPTMDLSAFKDGLEV-IVPNPITILVPSTGYPRPTATWCFG-DKVLETGDR 7135

Query: 386  VQFHVLSAFDPLPVSPSD--DKALGYQLLRQTVQSVFPEVNI 425
            V+   LSA+  L +SPS+  DK +    L   V+++  E+++
Sbjct: 7136 VKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDV 7177


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 328  PLT--NAIIRTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVADNR 385
            PLT  +A +  T  L+ FK G++  ++P      V    +P  T        K +   +R
Sbjct: 7011 PLTADDAFVEPTMDLSAFKDGLEV-IVPNPITILVPSTGYPRPTATWCFG-DKVLETGDR 7068

Query: 386  VQFHVLSAFDPLPVSPSD--DKALGYQLLRQTVQSVFPEVNI 425
            V+   LSA+  L +SPS+  DK +    L   V+++  E+++
Sbjct: 7069 VKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDV 7110


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 328  PLT--NAIIRTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVADNR 385
            PLT  +A +  T  L+ FK G++  ++P      V    +P  T        K +   +R
Sbjct: 6886 PLTADDAFVEPTMDLSAFKDGLEV-IVPNPITILVPSTGYPRPTATWCFG-DKVLETGDR 6943

Query: 386  VQFHVLSAFDPLPVSPSD--DKALGYQLLRQTVQSVFPEVNI 425
            V+   LSA+  L +SPS+  DK +    L   V+++  E+++
Sbjct: 6944 VKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDV 6985


>gi|110556640 DNA helicase HEL308 [Homo sapiens]
          Length = 1101

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 12/101 (11%)

Query: 145 ERDGVIYGRGTLDDKNSVMALLQALELLLIRKYIPRRSFFISLGHDEESSGTGAQRISAL 204
           ER  +IY   T   K  V  +L   ELL  RK +     ++++  ++ S           
Sbjct: 351 ERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKISG---------- 400

Query: 205 LQSRGVQLAFIVDEGGFILDDFIPNFK--KPIALIAVSEKG 243
           L S G++L F V+E       F P  +  K    IA  EKG
Sbjct: 401 LSSFGIELGFFVEEYAGSKGRFPPTKRREKKSLYIATIEKG 441


>gi|4507689 transient receptor potential cation channel, subfamily
           M, member 2 [Homo sapiens]
          Length = 1503

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 280 TPMPIIFGSGTVVTVLQQLANEFPFPVNIILSNPWL---FEPLI-----SRFMERNPLTN 331
           TP  ++ GSG V  V+ Q+AN     + I L    L   F+ +      SR +E      
Sbjct: 348 TPCVVVEGSGRVADVIAQVANLPVSDITISLIQQKLSVFFQEMFETFTESRIVEWTKKIQ 407

Query: 332 AIIRTTTALTIFKAG 346
            I+R    LT+F+ G
Sbjct: 408 DIVRRRQLLTVFREG 422


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,742,649
Number of Sequences: 37866
Number of extensions: 760947
Number of successful extensions: 1794
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1780
Number of HSP's gapped (non-prelim): 18
length of query: 502
length of database: 18,247,518
effective HSP length: 107
effective length of query: 395
effective length of database: 14,195,856
effective search space: 5607363120
effective search space used: 5607363120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.