Search of human proteins with 46240866

Search of human proteins with 46240866

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46240866 secretoglobin family 1D member 4 [Homo sapiens]
         (83 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46240866 secretoglobin family 1D member 4 [Homo sapiens]           169   4e-43
gi|5729909 lipophilin B precursor [Homo sapiens]                       96   5e-21
gi|5729907 lipophilin A precursor [Homo sapiens]                       90   3e-19
gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Hom...    43   5e-05
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ...    26   6.0  
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    26   6.0  
gi|164419758 bromodomain containing 2 [Homo sapiens]                   26   7.8  
gi|4826806 bromodomain containing 2 [Homo sapiens]                     26   7.8  

>gi|46240866 secretoglobin family 1D member 4 [Homo sapiens]
          Length = 83

 Score =  169 bits (428), Expect = 4e-43
 Identities = 83/83 (100%), Positives = 83/83 (100%)

Query: 1  MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL 60
          MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL
Sbjct: 1  MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL 60

Query: 61 EVKHCTDQISFKKRLSLKKSWWK 83
          EVKHCTDQISFKKRLSLKKSWWK
Sbjct: 61 EVKHCTDQISFKKRLSLKKSWWK 83


>gi|5729909 lipophilin B precursor [Homo sapiens]
          Length = 90

 Score = 96.3 bits (238), Expect = 5e-21
 Identities = 45/74 (60%), Positives = 58/74 (78%)

Query: 1  MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL 60
          M+LSVCLL+V+LALCCYQA+A  CPA+ SE+  F F+S+    L +AK + PPEA+AAKL
Sbjct: 1  MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL 60

Query: 61 EVKHCTDQISFKKR 74
           VK CTDQ+S +KR
Sbjct: 61 GVKRCTDQMSLQKR 74


>gi|5729907 lipophilin A precursor [Homo sapiens]
          Length = 90

 Score = 90.1 bits (222), Expect = 3e-19
 Identities = 43/83 (51%), Positives = 60/83 (72%)

Query: 1  MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL 60
          MRLSVCLL+++LALCCY+A+A+VC A+ SEIT FL         Q+AK   P EA+AAK+
Sbjct: 1  MRLSVCLLLLTLALCCYRANAVVCQALGSEITGFLLAGKPVFKFQLAKFKAPLEAVAAKM 60

Query: 61 EVKHCTDQISFKKRLSLKKSWWK 83
          EVK C D ++++KR+ + K+  K
Sbjct: 61 EVKKCVDTMAYEKRVLITKTLGK 83


>gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Homo
          sapiens]
          Length = 91

 Score = 43.1 bits (100), Expect = 5e-05
 Identities = 24/79 (30%), Positives = 40/79 (50%)

Query: 1  MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL 60
          M+L+V L +V+LALCC  A A +CP+    I   L  + ++    +   +P  +   A  
Sbjct: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA 60

Query: 61 EVKHCTDQISFKKRLSLKK 79
          ++K   D +  K R S+ K
Sbjct: 61 QLKKLVDTLPQKPRESIIK 79


>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
          sapiens]
          Length = 722

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 47 AKLNPPPEALAAKLEVKHCTDQISFKKRLSLKKSW 81
          A  NPPP   +   + K  T+Q+ +  R+ LK  W
Sbjct: 41 ASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLW 75


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
          sapiens]
          Length = 1362

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 47 AKLNPPPEALAAKLEVKHCTDQISFKKRLSLKKSW 81
          A  NPPP   +   + K  T+Q+ +  R+ LK  W
Sbjct: 41 ASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLW 75


>gi|164419758 bromodomain containing 2 [Homo sapiens]
          Length = 801

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 44 LQVAKLNPPPEALAAKLEVKHCTDQISFKKRLSLKKSW 81
          LQ+   NPPP  ++   +    T+Q+ +  ++ +K  W
Sbjct: 54 LQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALW 91


>gi|4826806 bromodomain containing 2 [Homo sapiens]
          Length = 801

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 44 LQVAKLNPPPEALAAKLEVKHCTDQISFKKRLSLKKSW 81
          LQ+   NPPP  ++   +    T+Q+ +  ++ +K  W
Sbjct: 54 LQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALW 91


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.132    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,026,643
Number of Sequences: 37866
Number of extensions: 89319
Number of successful extensions: 285
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 277
Number of HSP's gapped (non-prelim): 8
length of query: 83
length of database: 18,247,518
effective HSP length: 55
effective length of query: 28
effective length of database: 16,164,888
effective search space: 452616864
effective search space used: 452616864
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.