Search of human proteins with 4557871

Search of human proteins with 4557871

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4557871 transferrin [Homo sapiens]
         (698 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4557871 transferrin [Homo sapiens]                                1468   0.0  
gi|54607120 lactotransferrin precursor [Homo sapiens]                 858   0.0  
gi|134244281 melanoma-associated antigen p97 isoform 1 precursor...   462   e-130
gi|16163666 melanoma-associated antigen p97 isoform 2 precursor ...   188   2e-47
gi|148886654 polydom [Homo sapiens]                                    33   1.2  
gi|169212010 PREDICTED: hypothetical protein [Homo sapiens]            31   3.4  
gi|157266266 WD repeat domain 86 [Homo sapiens]                        31   3.4  
gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor...    31   4.4  
gi|239753202 PREDICTED: hypothetical protein [Homo sapiens]            30   9.9  
gi|239747774 PREDICTED: hypothetical protein XP_002348244 [Homo ...    30   9.9  
gi|239741640 PREDICTED: hypothetical protein XP_002342268 [Homo ...    30   9.9  

>gi|4557871 transferrin [Homo sapiens]
          Length = 698

 Score = 1468 bits (3800), Expect = 0.0
 Identities = 698/698 (100%), Positives = 698/698 (100%)

Query: 1   MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVK 60
           MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVK
Sbjct: 1   MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVK 60

Query: 61  KASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV 120
           KASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV
Sbjct: 61  KASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV 120

Query: 121 KKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPC 180
           KKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPC
Sbjct: 121 KKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPC 180

Query: 181 ADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANKADRD 240
           ADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANKADRD
Sbjct: 181 ADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANKADRD 240

Query: 241 QYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKE 300
           QYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKE
Sbjct: 241 QYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKE 300

Query: 301 FQLFSSPHGKDLLFKDSAHGFLKVPPRMDAKMYLGYEYVTAIRNLREGTCPEAPTDECKP 360
           FQLFSSPHGKDLLFKDSAHGFLKVPPRMDAKMYLGYEYVTAIRNLREGTCPEAPTDECKP
Sbjct: 301 FQLFSSPHGKDLLFKDSAHGFLKVPPRMDAKMYLGYEYVTAIRNLREGTCPEAPTDECKP 360

Query: 361 VKWCALSHHERLKCDEWSVNSVGKIECVSAETTEDCIAKIMNGEADAMSLDGGFVYIAGK 420
           VKWCALSHHERLKCDEWSVNSVGKIECVSAETTEDCIAKIMNGEADAMSLDGGFVYIAGK
Sbjct: 361 VKWCALSHHERLKCDEWSVNSVGKIECVSAETTEDCIAKIMNGEADAMSLDGGFVYIAGK 420

Query: 421 CGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTAGWN 480
           CGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTAGWN
Sbjct: 421 CGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTAGWN 480

Query: 481 IPMGLLYNKINHCRFDEFFSEGCAPGSKKDSSLCKLCMGSGLNLCEPNNKEGYYGYTGAF 540
           IPMGLLYNKINHCRFDEFFSEGCAPGSKKDSSLCKLCMGSGLNLCEPNNKEGYYGYTGAF
Sbjct: 481 IPMGLLYNKINHCRFDEFFSEGCAPGSKKDSSLCKLCMGSGLNLCEPNNKEGYYGYTGAF 540

Query: 541 RCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
           RCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR
Sbjct: 541 RCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600

Query: 601 APNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSETKDLLFRDDTVCLAKL 660
           APNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSETKDLLFRDDTVCLAKL
Sbjct: 601 APNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSETKDLLFRDDTVCLAKL 660

Query: 661 HDRNTYEKYLGEEYVKAVGNLRKCSTSSLLEACTFRRP 698
           HDRNTYEKYLGEEYVKAVGNLRKCSTSSLLEACTFRRP
Sbjct: 661 HDRNTYEKYLGEEYVKAVGNLRKCSTSSLLEACTFRRP 698


>gi|54607120 lactotransferrin precursor [Homo sapiens]
          Length = 710

 Score =  858 bits (2216), Expect = 0.0
 Identities = 430/714 (60%), Positives = 520/714 (72%), Gaps = 22/714 (3%)

Query: 1   MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVK 60
           M+L    LL    LGLCLA   ++V+WCAVS+ EATKC  ++ +M+ V    GP V+C+K
Sbjct: 1   MKLVFLVLLFLGALGLCLAGRRRSVQWCAVSQPEATKCFQWQRNMRKV---RGPPVSCIK 57

Query: 61  KASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV 120
           + S + CI+AIA N ADAVTLD G +Y+A LAP  L+PV AE YG++  P+T YYAVAVV
Sbjct: 58  RDSPIQCIQAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV 117

Query: 121 KKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLL--YCDLPEPRKPLEKAVANFFSGSCA 178
           KK   FQ+N+L+G KSCHTGL R+AGWN+PIG L  + +   P +P+E AVA FFS SC 
Sbjct: 118 KKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCV 177

Query: 179 PCADGTDFPQLCQLCPG-----CGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENL 233
           P AD   FP LC+LC G     C  S+   YF YSGAFKCL+DGAGDVAF++ ST+FE+L
Sbjct: 178 PGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDL 237

Query: 234 ANKADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGGKEDLIWELLNQAQEHF 293
           +++A+RD+YELLC DNTRKPVD++KDCHLA+VPSH VVARS+ GKED IW LL QAQE F
Sbjct: 238 SDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKF 297

Query: 294 GKDKSKEFQLFSSPHG-KDLLFKDSAHGFLKVPPRMDAKMYLGYEYVTAIRNLREGTCPE 352
           GKDKS +FQLF SP G KDLLFKDSA GF +VPPR+D+ +YLG  Y TAI+NLR+    E
Sbjct: 298 GKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSE--E 355

Query: 353 APTDECKPVKWCALSHHERLKCDEWSVNSVGKIECVSAETTEDCIAKIMNGEADAMSLDG 412
                   V WCA+   E  KC++WS  S G + C SA TTEDCIA ++ GEADAMSLDG
Sbjct: 356 EVAARRARVVWCAVGEQELRKCNQWSGLSEGSVTCSSASTTEDCIALVLKGEADAMSLDG 415

Query: 413 GFVYIAGKCGLVPVLAENYNKSD------NCEDTPEAGYFAVAVVKKSASDLTWDNLKGK 466
           G+VY AGKCGLVPVLAENY          NC D P  GY AVAVV++S + LTW+++KGK
Sbjct: 416 GYVYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRRSDTSLTWNSVKGK 475

Query: 467 KSCHTAVGRTAGWNIPMGLLYNKINHCRFDEFFSEGCAPGSKKDSSLCKLCMGS--GLNL 524
           KSCHTAV RTAGWNIPMGLL+N+   C+FDE+FS+ CAPGS   S+LC LC+G   G N 
Sbjct: 476 KSCHTAVDRTAGWNIPMGLLFNQTGSCKFDEYFSQSCAPGSDPRSNLCALCIGDEQGENK 535

Query: 525 CEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCL 583
           C PN+ E YYGYTGAFRCL E  GDVAFVK  TV QNT G N + WAK+L   D+ LLCL
Sbjct: 536 CVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCL 595

Query: 584 DGTRKPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRS 643
           DG RKPV E  +CHLA APNHAVV+R DK   + ++L  QQ  FG N +DC   FCLF+S
Sbjct: 596 DGKRKPVTEARSCHLAMAPNHAVVSRMDKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 655

Query: 644 ETKDLLFRDDTVCLAKLHDRNTYEKYLGEEYVKAVGNLRKCSTSSLLEACTFRR 697
           ETK+LLF D+T CLA+LH + TYEKYLG +YV  + NL+KCSTS LLEAC F R
Sbjct: 656 ETKNLLFNDNTECLARLHGKTTYEKYLGPQYVAGITNLKKCSTSPLLEACEFLR 709


>gi|134244281 melanoma-associated antigen p97 isoform 1 precursor
           [Homo sapiens]
          Length = 738

 Score =  462 bits (1190), Expect = e-130
 Identities = 301/741 (40%), Positives = 418/741 (56%), Gaps = 87/741 (11%)

Query: 1   MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVK 60
           MR   GAL +  +L L   +    VRWCA S+ E  KC +  +  +       PS+ CV+
Sbjct: 1   MRGPSGALWL--LLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREA--GIQPSLLCVR 56

Query: 61  KASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV 120
             S   C++ IAA EADA+TLD G +Y+A    + LKPVV E Y   ++  T YYAVAVV
Sbjct: 57  GTSADHCVQLIAAQEADAITLDGGAIYEAG-KEHGLKPVVGEVYD--QEVGTSYYAVAVV 113

Query: 121 KKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLY---------CDLPEPRKPLEKAVAN 171
           ++ S   ++ L+G KSCHTG+ R+ GWN+P+G L          CD+        KAV++
Sbjct: 114 RRSSHVTIDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVL-------KAVSD 166

Query: 172 FFSGSCAPCADGTDFPQ-LCQLCPG-------CGCSTLNQYFGYSGAFKCLKDGAGDVAF 223
           +F GSC P A  T + + LC+LC G       C  S L +Y+ YSGAF+CL +GAGDVAF
Sbjct: 167 YFGGSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAF 226

Query: 224 VKHSTIFENLANKAD--------RDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSM 275
           VKHST+ EN   K             +ELLC D +R  V E++ CHLA+VP+H VV R+ 
Sbjct: 227 VKHSTVLENTDGKTLPSWGQALLSQDFELLCRDGSRADVTEWRQCHLARVPAHAVVVRAD 286

Query: 276 --GGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP-HG-KDLLFKDSAHGFLKVPPRMDAK 331
             GG   LI+ LLN+ Q  F  + S  FQ+FSS  +G KDLLFKDS    + +  +   +
Sbjct: 287 TDGG---LIFRLLNEGQRLFSHEGSS-FQMFSSEAYGQKDLLFKDSTSELVPIATQT-YE 341

Query: 332 MYLGYEYVTAIRNLREGTCPEAPTDECKPVKWCALSHHERLKCDEWSV-----NSVGKIE 386
            +LG+EY+ A++ L    C   P      ++WC LS  E  KC + +V         +I+
Sbjct: 342 AWLGHEYLHAMKGL---LCD--PNRLPPYLRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQ 396

Query: 387 CVSAETTEDCIAKIMNGEADAMSLDGGFVYIAGKC-GLVPVLAENYNKSDNCEDTPEAGY 445
           CVSA++ + C+ +I   + DA++L G  +Y AGK  GLVP   E+Y   D+        Y
Sbjct: 397 CVSAKSPQHCMERIQAEQVDAVTLSGEDIYTAGKTYGLVPAAGEHYAPEDSSNS-----Y 451

Query: 446 FAVAVVKKSASD-LTWDNLKGKKSCHTAVGRTAGWNIPMGLL----YNKINHC----RFD 496
           + VAVV++ +S   T D L+GK+SCH   G  AGW++P+G L    + +   C       
Sbjct: 452 YVVAVVRRDSSHAFTLDELRGKRSCHAGFGSPAGWDVPVGALIQRGFIRPKDCDVLTAVS 511

Query: 497 EFFSEGCAPGSKKD---SSLCKLCMGS--GLNLCEPNNKEGYYGYTGAFRCLVEK-GDVA 550
           EFF+  C P +      SSLC LC+G   G N C  N++E YYGY GAFRCLVE  GDVA
Sbjct: 512 EFFNASCVPVNNPKNYPSSLCALCVGDEQGRNKCVGNSQERYYGYRGAFRCLVENAGDVA 571

Query: 551 FVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLARAPNHAVVTRK 610
           FV+H TV  NT G N +PWA  L  +DYELLC +G R  V ++A C+LA+ P HAV+ R 
Sbjct: 572 FVRHTTVFDNTNGHNSEPWAAELRSEDYELLCPNGARAEVSQFAACNLAQIPPHAVMVRP 631

Query: 611 DKEA-CVHKILRQQQHLFGSNVTDCSGNFCLFRSET---KDLLFRDDTVCLAKLHDRNTY 666
           D     V+ +L + Q LFG +       F +F S     +DLLF+D TV    + ++ TY
Sbjct: 632 DTNIFTVYGLLDKAQDLFGDDHN--KNGFKMFDSSNYHGQDLLFKDATVRAVPVGEKTTY 689

Query: 667 EKYLGEEYVKAVGNL--RKCS 685
             +LG +YV A+  +  ++CS
Sbjct: 690 RGWLGLDYVAALEGMSSQQCS 710



 Score =  206 bits (524), Expect = 6e-53
 Identities = 130/357 (36%), Positives = 190/357 (53%), Gaps = 38/357 (10%)

Query: 25  VRWCAVSEHEATKCQSF-----RDHMKSVIPSDGPSVACVKKASYLDCIRAIAANEADAV 79
           +RWC +S  E  KC        R  +K       P + CV   S   C+  I A + DAV
Sbjct: 366 LRWCVLSTPEIQKCGDMAVAFRRQRLK-------PEIQCVSAKSPQHCMERIQAEQVDAV 418

Query: 80  TLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKKDSG--FQMNQLRGKKSC 137
           TL    +Y A      L P   E Y + ED    YY VAVV++DS   F +++LRGK+SC
Sbjct: 419 TLSGEDIYTAGKT-YGLVPAAGEHY-APEDSSNSYYVVAVVRRDSSHAFTLDELRGKRSC 476

Query: 138 HTGLGRSAGWNIPIG-LLYCDLPEPRK-PLEKAVANFFSGSCAPCADGTDFPQ-LCQLCP 194
           H G G  AGW++P+G L+      P+   +  AV+ FF+ SC P  +  ++P  LC LC 
Sbjct: 477 HAGFGSPAGWDVPVGALIQRGFIRPKDCDVLTAVSEFFNASCVPVNNPKNYPSSLCALCV 536

Query: 195 G-------CGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENL--------ANKADR 239
           G       C  ++  +Y+GY GAF+CL + AGDVAFV+H+T+F+N         A +   
Sbjct: 537 GDEQGRNKCVGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGHNSEPWAAELRS 596

Query: 240 DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSK 299
           + YELLC +  R  V ++  C+LAQ+P H V+ R        ++ LL++AQ+ FG D +K
Sbjct: 597 EDYELLCPNGARAEVSQFAACNLAQIPPHAVMVRP-DTNIFTVYGLLDKAQDLFGDDHNK 655

Query: 300 E-FQLFSSP--HGKDLLFKDSAHGFLKVPPRMDAKMYLGYEYVTAIRNLREGTCPEA 353
             F++F S   HG+DLLFKD+    + V  +   + +LG +YV A+  +    C  A
Sbjct: 656 NGFKMFDSSNYHGQDLLFKDATVRAVPVGEKTTYRGWLGLDYVAALEGMSSQQCSGA 712


>gi|16163666 melanoma-associated antigen p97 isoform 2 precursor
           [Homo sapiens]
          Length = 302

 Score =  188 bits (477), Expect = 2e-47
 Identities = 124/330 (37%), Positives = 173/330 (52%), Gaps = 46/330 (13%)

Query: 1   MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVK 60
           MR   GAL +  +L L   +    VRWCA S+ E  KC +  +  +       PS+ CV+
Sbjct: 1   MRGPSGALWL--LLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREA--GIQPSLLCVR 56

Query: 61  KASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV 120
             S   C++ IAA EADA+TLD G +Y+A    + LKPVV E Y   ++  T YYAVAVV
Sbjct: 57  GTSADHCVQLIAAQEADAITLDGGAIYEAG-KEHGLKPVVGEVYD--QEVGTSYYAVAVV 113

Query: 121 KKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLY---------CDLPEPRKPLEKAVAN 171
           ++ S   ++ L+G KSCHTG+ R+ GWN+P+G L          CD+        KAV++
Sbjct: 114 RRSSHVTIDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVL-------KAVSD 166

Query: 172 FFSGSCAPCADGTDFPQ-LCQLCPG-------CGCSTLNQYFGYSGAFKCLKDGAGDVAF 223
           +F GSC P A  T + + LC+LC G       C  S L +Y+ YSGAF+CL +GAGDVAF
Sbjct: 167 YFGGSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAF 226

Query: 224 VKHSTIFENLANKADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGGKEDLIW 283
           VKHST+ EN      R Q        TR   +E       + P+H    R+M       W
Sbjct: 227 VKHSTVLENTDESPSRRQ------TWTRSEEEE------GECPAHEEARRTMRSSAGQAW 274

Query: 284 ELLNQAQEHFGKDKSKEFQLFSSPHGKDLL 313
           +    A  H  +D+S + +       +D+L
Sbjct: 275 K---WAPVHRPQDESDKGEFGKRAKSRDML 301



 Score =  157 bits (396), Expect = 4e-38
 Identities = 105/274 (38%), Positives = 142/274 (51%), Gaps = 30/274 (10%)

Query: 361 VKWCALSHHERLKCDEWS-----VNSVGKIECVSAETTEDCIAKIMNGEADAMSLDGGFV 415
           V+WCA S  E+ KC   S           + CV   + + C+  I   EADA++LDGG +
Sbjct: 23  VRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSADHCVQLIAAQEADAITLDGGAI 82

Query: 416 YIAGK-CGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVG 474
           Y AGK  GL PV+ E Y++           Y+AVAVV++S S +T D LKG KSCHT + 
Sbjct: 83  YEAGKEHGLKPVVGEVYDQEVG------TSYYAVAVVRRS-SHVTIDTLKGVKSCHTGIN 135

Query: 475 RTAGWNIPMGLLYN----KINHC----RFDEFFSEGCAPGSKKDS---SLCKLCMG--SG 521
           RT GWN+P+G L       +  C       ++F   C PG+ + S   SLC+LC G  SG
Sbjct: 136 RTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETSYSESLCRLCRGDSSG 195

Query: 522 LNLCEPNNKEGYYGYTGAFRCLVE-KGDVAFVKHQTVPQNT--GGKNPDPWAKNLNEKDY 578
             +C+ +  E YY Y+GAFRCL E  GDVAFVKH TV +NT         W ++  E++ 
Sbjct: 196 EGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTDESPSRRQTWTRS-EEEEG 254

Query: 579 ELLCLDGTRKPVEEYANCHLARAPNHAVVTRKDK 612
           E    +  R+ +   A      AP H      DK
Sbjct: 255 ECPAHEEARRTMRSSAGQAWKWAPVHRPQDESDK 288


>gi|148886654 polydom [Homo sapiens]
          Length = 3571

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 18/75 (24%)

Query: 480  NIPMGLLYNKINHCRFDEFFSEGCAPGSKKDSS---LCKLCMGS---------GLNLCEP 527
            N P+G  YN       + F  E C  GS +D      CKLC             ++ C+ 
Sbjct: 1001 NCPLGTYYN------LEHFTCESCRIGSYQDEEGQLECKLCPSGMYTEYIHSRNISDCKA 1054

Query: 528  NNKEGYYGYTGAFRC 542
              K+G Y Y+G   C
Sbjct: 1055 QCKQGTYSYSGLETC 1069


>gi|169212010 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 8/52 (15%)

Query: 10 VCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVKK 61
          VC  +G C A       WC+ S   +T C S++D  K V P+  P V  VK+
Sbjct: 33 VCTRVGTCAAC------WCSWSTGRSTACPSWKDFWKPVGPA--PHVLDVKR 76


>gi|157266266 WD repeat domain 86 [Homo sapiens]
          Length = 376

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 18/102 (17%)

Query: 123 DSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPCAD 182
           D G    + RG ++C   L  SA W++P          P      A     +GS     D
Sbjct: 125 DKGQMSREFRGHRNCVLTLAYSAPWDLP--------STPCAEEAAAGGLLVTGS----TD 172

Query: 183 GTDFPQLCQLCPGCGCSTLNQYFGYSGAFKCL-KDGAGDVAF 223
           GT   ++ Q+  GC   TL    G++GA  CL  D  G  AF
Sbjct: 173 GT--AKVWQVASGCCHQTLR---GHTGAVLCLVLDTPGHTAF 209


>gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1
           [Homo sapiens]
          Length = 1503

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 25/88 (28%)

Query: 301 FQLFSSPHGKDLLFKDSAHGFLKVPPRMDAKMYLGYEYV--------TAIRNLREGTCPE 352
           + LF   HG+         G+L++ P   AKM LG+  +         A+  +++GT PE
Sbjct: 51  YLLFIHHHGR---------GYLRMSPLFKAKMVLGFALIVLCTSSVAVALWKIQQGT-PE 100

Query: 353 APTDECKPVKWCA-------LSHHERLK 373
           AP     P  W         L H ER K
Sbjct: 101 APEFLIHPTVWLTTMSFAVFLIHTERKK 128


>gi|239753202 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 124

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 175 GSCAPCADGTDFPQLCQLCPGCGCST 200
           GS AP   G + P+   +CP CGC +
Sbjct: 31  GSSAPSDVGKEIPRCPCICPNCGCGS 56


>gi|239747774 PREDICTED: hypothetical protein XP_002348244 [Homo
           sapiens]
          Length = 144

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 175 GSCAPCADGTDFPQLCQLCPGCGCST 200
           GS AP   G + P+   +CP CGC +
Sbjct: 51  GSSAPSDVGKEIPRCPCICPNCGCGS 76


>gi|239741640 PREDICTED: hypothetical protein XP_002342268 [Homo
           sapiens]
          Length = 144

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 175 GSCAPCADGTDFPQLCQLCPGCGCST 200
           GS AP   G + P+   +CP CGC +
Sbjct: 51  GSSAPSDVGKEIPRCPCICPNCGCGS 76


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,604,231
Number of Sequences: 37866
Number of extensions: 1438521
Number of successful extensions: 2572
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2492
Number of HSP's gapped (non-prelim): 16
length of query: 698
length of database: 18,247,518
effective HSP length: 109
effective length of query: 589
effective length of database: 14,120,124
effective search space: 8316753036
effective search space used: 8316753036
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.