Guide to the Human Genome
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Name: DERL1 Sequence: fasta or formatted (251aa) NCBI GI: 13236516
Description:

Der1-like domain family, member 1 isoform a

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [231aa] Der1-like domain family, member 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         15           2
 C cysteine            0.8          2           1
 D aspartate           3.6          9           1
 E glutamate           1.2          3           1
 F phenylalanine       9.2         23           2
 G glycine            11.2         28           4
 H histidine           0.8          2           1
 I isoleucine          6.8         17           2
 K lysine              0.8          2           1
 L leucine            12.4         31           2
 M methionine          4.0         10           1
 N asparagine          3.6          9           1
 P proline             6.0         15           2
 Q glutamine           3.2          8           1
 R arginine            6.8         17           2
 S serine              4.4         11           1
 T threonine           4.0         10           1
 V valine              5.6         14           1
 W tryptophan          4.0         10           1
 Y tyrosine            6.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Der1-like domain family, member 1 isoform a 
DERL1                 0.897   Der1-like domain family, member 1 isoform b 
DERL2                 0.237   Der1-like domain family, member 2 
DERL3                 0.235   derlin 3 isoform 1 
DERL3                 0.235   derlin 3 isoform 2 
DERL3                 0.235   derlin 3 isoform 3 
GNRHR                 0.014   gonadotropin-releasing hormone receptor isoform 1 [Ho...
F2RL1                 0.010   coagulation factor II (thrombin) receptor-like 1 pre...
RHBDD2                0.008   rhomboid domain containing 2 isoform b 
RHBDD2                0.008   rhomboid domain containing 2 isoform a 
LOC100293088          0.006   PREDICTED: hypothetical protein 
LOC100289467          0.006   PREDICTED: hypothetical protein 
LOC100289467          0.006   PREDICTED: hypothetical protein XP_002342401 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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