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Search of human proteins with 108773797
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|108773797 ganglioside-induced differentiation-associated
protein 1 isoform a [Homo sapiens]
(358 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|108773797 ganglioside-induced differentiation-associated prot... 721 0.0
gi|108773799 ganglioside-induced differentiation-associated prot... 582 e-166
gi|30581160 ganglioside-induced differentiation-associated prote... 385 e-107
gi|118498356 kinectin 1 isoform a [Homo sapiens] 37 0.027
gi|33620775 kinectin 1 isoform a [Homo sapiens] 37 0.027
gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens] 37 0.036
gi|50083279 centrosome protein 4 [Homo sapiens] 37 0.036
gi|54633317 thioredoxin domain containing 11 [Homo sapiens] 37 0.036
gi|4504187 glutathione S-transferase theta 2 [Homo sapiens] 36 0.047
gi|124249394 glutathione S-transferase theta 2B [Homo sapiens] 36 0.047
gi|209863034 periostin, osteoblast specific factor isoform 4 [Ho... 36 0.061
gi|216548091 leucine zipper protein 1 [Homo sapiens] 35 0.079
gi|216548085 leucine zipper protein 1 [Homo sapiens] 35 0.079
gi|82617632 chloride intracellular channel 5 isoform b [Homo sap... 35 0.10
gi|166197662 chloride intracellular channel 5 isoform a [Homo sa... 35 0.10
gi|209862911 periostin, osteoblast specific factor isoform 2 [Ho... 35 0.14
gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens] 35 0.14
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 34 0.18
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 34 0.23
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 33 0.39
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 33 0.39
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 33 0.39
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 33 0.39
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 33 0.39
gi|119395750 keratin 1 [Homo sapiens] 32 0.67
gi|117968420 NUF2, NDC80 kinetochore complex component [Homo sap... 32 0.88
gi|117968353 NUF2, NDC80 kinetochore complex component [Homo sap... 32 0.88
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 32 1.1
gi|169208458 PREDICTED: similar to golgi autoantigen, golgin sub... 32 1.1
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 32 1.1
>gi|108773797 ganglioside-induced differentiation-associated protein
1 isoform a [Homo sapiens]
Length = 358
Score = 721 bits (1861), Expect = 0.0
Identities = 358/358 (100%), Positives = 358/358 (100%)
Query: 1 MAERQEEQRGSPPLRAEGKADAEVKLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPL 60
MAERQEEQRGSPPLRAEGKADAEVKLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPL
Sbjct: 1 MAERQEEQRGSPPLRAEGKADAEVKLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPL 60
Query: 61 SEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPR 120
SEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPR
Sbjct: 61 SEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPR 120
Query: 121 VQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPD 180
VQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPD
Sbjct: 121 VQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPD 180
Query: 181 LQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLC 240
LQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLC
Sbjct: 181 LQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLC 240
Query: 241 GESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNIL 300
GESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNIL
Sbjct: 241 GESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNIL 300
Query: 301 ISAVLPTAFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF 358
ISAVLPTAFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF
Sbjct: 301 ISAVLPTAFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF 358
>gi|108773799 ganglioside-induced differentiation-associated protein
1 isoform b [Homo sapiens]
Length = 290
Score = 582 bits (1501), Expect = e-166
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 69 MRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELL 128
MRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELL
Sbjct: 1 MRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELL 60
Query: 129 DSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAK 188
DSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAK
Sbjct: 61 DSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAK 120
Query: 189 QKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLAD 248
QKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLAD
Sbjct: 121 QKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLAD 180
Query: 249 VSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTA 308
VSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTA
Sbjct: 181 VSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTA 240
Query: 309 FRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF 358
FRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF
Sbjct: 241 FRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF 290
>gi|30581160 ganglioside-induced differentiation-associated protein
1-like 1 [Homo sapiens]
Length = 367
Score = 385 bits (988), Expect = e-107
Identities = 187/319 (58%), Positives = 236/319 (73%), Gaps = 1/319 (0%)
Query: 26 LILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGEN 85
L+LYHWT SFSSQKVRLVIAEK L CEE DVSLP SEH EPWFMRLN EVPV+IH +N
Sbjct: 47 LVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDN 106
Query: 86 IICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPE 145
II + QIIDY+E+TF E LMP+ S+ + RV YRELLD+LPMDAYTHGCILHPE
Sbjct: 107 IISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHGCILHPE 166
Query: 146 LTVDSMIPAYATTRIRSQIGNTESELKKL-AEENPDLQEAYIAKQKRLKSKLLDHDNVKY 204
LT DSMIP YAT IR + N ++L KL EE P L E Y++KQK+L +K+L+HD+V Y
Sbjct: 167 LTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSY 226
Query: 205 LKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFA 264
LKKIL EL VLDQ+E EL++R E + + WLCG +FTLADV L TLHRLKFLG +
Sbjct: 227 LKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLKFLGLS 286
Query: 265 RRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGTTL 324
++ W +G RPNL++++ERV +R F KVLG ++ L+SAV+P AFR+ K++ P G +
Sbjct: 287 KKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASF 346
Query: 325 VVGLLAGVGYFAFMLFRKR 343
++G L G+GYFA+ +K+
Sbjct: 347 LMGSLGGMGYFAYWYLKKK 365
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 37.0 bits (84), Expect = 0.027
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 159 RIRSQIGNTESELKKLAEENPDLQ---------EAYIAKQKRLKSKLLDHDNVKYLKKIL 209
+++S ++E EL++L EN D++ E + K + +S + V+ LK +L
Sbjct: 1177 QMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTE--VRELKDLL 1234
Query: 210 DELEKVLDQVETELQRRNEE 229
EL+K LD +E R+NEE
Sbjct: 1235 TELQKKLDDSYSEAVRQNEE 1254
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 37.0 bits (84), Expect = 0.027
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 159 RIRSQIGNTESELKKLAEENPDLQ---------EAYIAKQKRLKSKLLDHDNVKYLKKIL 209
+++S ++E EL++L EN D++ E + K + +S + V+ LK +L
Sbjct: 1177 QMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTE--VRELKDLL 1234
Query: 210 DELEKVLDQVETELQRRNEE 229
EL+K LD +E R+NEE
Sbjct: 1235 TELQKKLDDSYSEAVRQNEE 1254
>gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]
Length = 216
Score = 36.6 bits (83), Expect = 0.036
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 25 KLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPW---FMRLNSTGEVPVLI 81
K ILY + S S +VR+ +A K + E ++L + + + + F LN +VP L
Sbjct: 5 KPILYSYFRSSCSWRVRIALALKGIDYETVPINL-IKDGGQQFSKDFQALNPMKQVPTLK 63
Query: 82 HGENIICEATQIIDYLEQTFLDERTPRLMP 111
I ++ II+YLE+ TPRL+P
Sbjct: 64 IDGITIHQSLAIIEYLEEM---RPTPRLLP 90
>gi|50083279 centrosome protein 4 [Homo sapiens]
Length = 1140
Score = 36.6 bits (83), Expect = 0.036
Identities = 55/279 (19%), Positives = 114/279 (40%), Gaps = 39/279 (13%)
Query: 47 KALKCEEHDV---SLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTF-- 101
K ++ E ++ S+ L P + L S + E +I +D+L+Q
Sbjct: 232 KQIELREREIERLSVALDGGRSPDVLSLESRNKT-----NEKLIAHLNIQVDFLQQANKD 286
Query: 102 LDERTPRLMPDKESMYYPRV----QHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYAT 157
L++R LM KE++ V ++ + + +D H E +++
Sbjct: 287 LEKRIRELMETKETVTSEVVNLSNKNEKLCQELTEIDQLAQQLERHKEEVLETA------ 340
Query: 158 TRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLD 217
++G + E+K+ E DL+E Q L + + + + +LE V+
Sbjct: 341 ---DKELGEAKKEIKRKLSEMQDLEETMAKLQLELNLCQKEKERLSDELLVKSDLETVVH 397
Query: 218 QVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKF-LGFARRNWGNGKRPNL 276
Q+E E QR +++ ESF + + L + + R++ G RR+ + L
Sbjct: 398 QLEQEKQRLSKKV-----------ESFAVTERQLTLEVERMRLEHGIKRRDRSPSR---L 443
Query: 277 ETYYERV-LKRKTFNKVLGHVNNILISAVLPTAFRVAKK 314
+T+ + + +R + K L + +I+ T++ +K
Sbjct: 444 DTFLKGIEEERDYYKKELERLQHIIQRRSCSTSYSAREK 482
>gi|54633317 thioredoxin domain containing 11 [Homo sapiens]
Length = 958
Score = 36.6 bits (83), Expect = 0.036
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 161 RSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVE 220
R I + E E++KL E LQ A + + +L S D ++ ++ L+E +L
Sbjct: 797 RGHISHLEREIQKLRAEISSLQRAQVQVESQLSSARRDEHRLRQQQRALEEQHSLLHAHS 856
Query: 221 TELQRRNEETPEEGQQPWLCGESFTLADVS 250
+LQ E+ E Q+ L + LAD S
Sbjct: 857 EQLQALYEQKTRELQE--LARKLQELADAS 884
>gi|4504187 glutathione S-transferase theta 2 [Homo sapiens]
Length = 244
Score = 36.2 bits (82), Expect = 0.047
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 37 SQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDY 96
S+ V + + + E V L +H F+++NS G++P L G+ I+ E++ I+ Y
Sbjct: 14 SRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIY 73
Query: 97 L 97
L
Sbjct: 74 L 74
>gi|124249394 glutathione S-transferase theta 2B [Homo sapiens]
Length = 244
Score = 36.2 bits (82), Expect = 0.047
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 37 SQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDY 96
S+ V + + + E V L +H F+++NS G++P L G+ I+ E++ I+ Y
Sbjct: 14 SRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIY 73
Query: 97 L 97
L
Sbjct: 74 L 74
>gi|209863034 periostin, osteoblast specific factor isoform 4 [Homo
sapiens]
Length = 751
Score = 35.8 bits (81), Expect = 0.061
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 92 QIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSM 151
++I Y++ F+ T + +P ++Y P ++ Y +++D +P++ I E + +
Sbjct: 646 KLIKYIQIKFVRGSTFKEIP--VTVYKPIIKKYTKIIDGVPVE------ITEKETREERI 697
Query: 152 I--PAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQ 189
I P TRI + G TE LKKL +E+ +++ K+
Sbjct: 698 ITGPEIKYTRISTGGGETEETLKKLLQEDTPVRKLQANKK 737
>gi|216548091 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 35.4 bits (80), Expect = 0.079
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 159 RIRSQIGNTES---ELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKV 215
++++QI + ES ELKK+ +N DLQ+ Y+++Q + K + +K K ELE
Sbjct: 297 KLKTQIKHFESLEEELKKMKSKNNDLQDNYLSEQNKNKLLASQLEEIKLQIKKQKELEN- 355
Query: 216 LDQVETE-----LQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRN 267
+VE E + R+E T G T ++S RL+ FA N
Sbjct: 356 -GEVEGEDAFLSSKGRHERTKFRGHGSEASVSKHTARELSPQHKRERLRNREFALNN 411
>gi|216548085 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 35.4 bits (80), Expect = 0.079
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 159 RIRSQIGNTES---ELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKV 215
++++QI + ES ELKK+ +N DLQ+ Y+++Q + K + +K K ELE
Sbjct: 297 KLKTQIKHFESLEEELKKMKSKNNDLQDNYLSEQNKNKLLASQLEEIKLQIKKQKELEN- 355
Query: 216 LDQVETE-----LQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRN 267
+VE E + R+E T G T ++S RL+ FA N
Sbjct: 356 -GEVEGEDAFLSSKGRHERTKFRGHGSEASVSKHTARELSPQHKRERLRNREFALNN 411
>gi|82617632 chloride intracellular channel 5 isoform b [Homo
sapiens]
Length = 251
Score = 35.0 bits (79), Expect = 0.10
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 184 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 243
AYI K+ + L+ K LKK+ D L L + E+ + ++ +L G+
Sbjct: 124 AYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE---EIDANTCGEDKGSRRKFLDGDE 180
Query: 244 FTLADVSLAVTLHRLKFLGFARRNW 268
TLAD +L LH +K + RN+
Sbjct: 181 LTLADCNLLPKLHVVKIVAKKYRNY 205
>gi|166197662 chloride intracellular channel 5 isoform a [Homo
sapiens]
Length = 410
Score = 35.0 bits (79), Expect = 0.10
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 184 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 243
AYI K+ + L+ K LKK+ D L L + E+ + ++ +L G+
Sbjct: 283 AYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE---EIDANTCGEDKGSRRKFLDGDE 339
Query: 244 FTLADVSLAVTLHRLKFLGFARRNW 268
TLAD +L LH +K + RN+
Sbjct: 340 LTLADCNLLPKLHVVKIVAKKYRNY 364
>gi|209862911 periostin, osteoblast specific factor isoform 2 [Homo
sapiens]
Length = 779
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 92 QIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSM 151
++I Y++ F+ T + +P ++Y P ++ Y +++D +P++ I E + +
Sbjct: 646 KLIKYIQIKFVRGSTFKEIP--VTVYKPIIKKYTKIIDGVPVE------ITEKETREERI 697
Query: 152 I--PAYATTRIRSQIGNTESELKKLAEE 177
I P TRI + G TE LKKL +E
Sbjct: 698 ITGPEIKYTRISTGGGETEETLKKLLQE 725
>gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
Length = 241
Score = 34.7 bits (78), Expect = 0.14
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 37 SQKVRLVIAEKALKCEEHDVSLPLSEHNEP-WFMRLNSTGEVPVLIHGE-NIICEATQII 94
+++ RLV+ K ++ E +++L N+P WF + N G VPVL + + +I E+
Sbjct: 35 AERTRLVLKAKGIRHEVININLK----NKPEWFFKKNPFGLVPVLENSQGQLIYESAITC 90
Query: 95 DYLEQTFLDERTPRLMPD 112
+YL++ + + +L+PD
Sbjct: 91 EYLDEAYPGK---KLLPD 105
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 160 IRSQIGNTESELKKLAEENPDL---------QEAYIAKQKRL---KSKLLDHDNVKYLKK 207
+R Q + + +K+ E+ ++ QE + +Q+RL K KL +H+ ++ +K
Sbjct: 729 MREQEEKMQEQEEKMQEQEEEMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEK 788
Query: 208 ILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRN 267
I ++ EK+ DQ E + R +E GQ+ + G+ + + K G +
Sbjct: 789 IWEQEEKMRDQEE---KMRGQEEKMRGQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEKM 845
Query: 268 WGNGKR 273
WG ++
Sbjct: 846 WGQEEK 851
Score = 30.8 bits (68), Expect = 2.0
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
Query: 167 TESELKKLAEENPDLQEAY-IAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVET---- 221
T ELKK +N +LQE +A+ ++ + +L NVK LK+ L+ + +L QV+T
Sbjct: 219 TNEELKK---KNAELQEKLPLAESEKSEIQL----NVKELKRKLERAKFLLPQVQTNTLQ 271
Query: 222 -ELQRRNEETPEE 233
E+ R+ EE E+
Sbjct: 272 EEMWRQEEELREQ 284
Score = 29.3 bits (64), Expect = 5.7
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 176 EENPDLQEAYIAKQKRL---KSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPE 232
EE QE + +Q+RL K KL +H+ ++ +K+ ++ EK+ +Q ++ ++T E
Sbjct: 644 EEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKMQEQEEKIWEQ-----EKMEKKTQE 698
Query: 233 EGQQPW 238
+ ++ W
Sbjct: 699 QEKKTW 704
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 33.9 bits (76), Expect = 0.23
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 168 ESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYL-----KKILDELEKVLDQVETE 222
E + ++ E+ + + +Q+ ++ KL++ + + + K++ +ELEK D++E E
Sbjct: 97 EKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIERE 156
Query: 223 LQRRNEE 229
+ RR EE
Sbjct: 157 VLRRVEE 163
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 33.1 bits (74), Expect = 0.39
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 156 ATTRIRSQIGNTESELKKLAEENPDL--QEAYIAKQKRLKSKLL---------DHDNVKY 204
A +++ + TE++LKKL EE L Q +AK+K+L + + + K
Sbjct: 958 ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKS 1017
Query: 205 LKKILDELEKVLDQVETELQRRNEETPE-EGQQPWLCGESFTLAD 248
L K+ ++ E ++ +E L+R ++ E E + L G+S L+D
Sbjct: 1018 LAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSD 1062
Score = 28.5 bits (62), Expect = 9.7
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 149 DSMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDH--DNVKYLK 206
D++ A +RS+ + LKK EE EA I + ++ S+ ++ + ++ K
Sbjct: 1150 DTLDSTAAQQELRSKREQEVNILKKTLEEEAKTHEAQIQEMRQKHSQAVEELAEQLEQTK 1209
Query: 207 KILDELEKVLDQVETE 222
++ LEK +E E
Sbjct: 1210 RVKANLEKAKQTLENE 1225
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 33.1 bits (74), Expect = 0.39
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 13 PLRAEGKADAEVKLILYHWTHSFSSQKVRLVIAEKALK-CEEHDVSLPLSEHNEPWFMRL 71
PL +A+ E+ + F K L +E K EE VSL L E N+ ++L
Sbjct: 842 PLLKSAEAEKEMATM----KEDFERTKEELARSEARRKELEEKMVSL-LQEKND---LQL 893
Query: 72 NSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKE--SMYYPRVQHYRELLD 129
E L+ E CE L + + E T RL ++E S + ++ +
Sbjct: 894 QVQSETENLMDAEER-CEGLIKSKILLEAKVKELTERLEEEEEMNSELVAKKRNLEDKCS 952
Query: 130 SLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQE--AYIA 187
SL D I ELT+ T++ + TE+++K L+EE L+E + +
Sbjct: 953 SLKRD------IDDLELTL---------TKVEKEKHATENKVKNLSEEMTALEENISKLT 997
Query: 188 KQKR---------LKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNE 228
K+K+ L ++ D V L KI +LE+ D +E L++ +
Sbjct: 998 KEKKSLQEAHQQTLDDLQVEEDKVNGLIKINAKLEQQTDDLEGSLEQEKK 1047
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 33.1 bits (74), Expect = 0.39
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 167 TESELKKLAEENPDLQEAYIAKQKRLKSKLL----DHDNVKYLKKILDELEKV---LDQV 219
+E E+KK +EN L++ QK L+ K + H+ + L + DEL K L Q
Sbjct: 1006 SEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQK 1065
Query: 220 ETELQRRNEETPEE 233
TE++ E+ EE
Sbjct: 1066 YTEVKNVKEKLVEE 1079
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 33.1 bits (74), Expect = 0.39
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 167 TESELKKLAEENPDLQEAYIAKQKRLKSKLL----DHDNVKYLKKILDELEKV---LDQV 219
+E E+KK +EN L++ QK L+ K + H+ + L + DEL K L Q
Sbjct: 1019 SEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQK 1078
Query: 220 ETELQRRNEETPEE 233
TE++ E+ EE
Sbjct: 1079 YTEVKNVKEKLVEE 1092
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 33.1 bits (74), Expect = 0.39
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 158 TRIRSQIGNTESELKKLAEENP-------DLQEAYIAKQKRLKSKLLDHDNVKYLKKI-- 208
T++ S+I E + A++ P +LQE + K+K+ + K L D ++Y +KI
Sbjct: 1980 TKVESEIRKEYLEKIQGAQKEPGNKSHAKELQE--LLKEKQQEVKQLQKDCIRYQEKISA 2037
Query: 209 LDELEKVLDQVETELQRRNEETPE 232
L+ K L+ V+TE Q+ E T E
Sbjct: 2038 LERTVKALEFVQTESQKDLEITKE 2061
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 32.3 bits (72), Expect = 0.67
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 159 RIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNV-----KYLKKILDELE 213
R+RS+I N + ++ L + D ++ K K+KL D ++ + L ++L + +
Sbjct: 407 RLRSEIDNVKKQISNLQQSISDAEQRGENALKDAKNKLNDLEDALQQAKEDLARLLRDYQ 466
Query: 214 KVLD-QVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGNG 271
++++ ++ +L+ T EG++ + GE +VS++V+ G R G G
Sbjct: 467 ELMNTKLALDLEIATYRTLLEGEESRMSGE--CAPNVSVSVSTSHTTISGGGSRGGGGG 523
>gi|117968420 NUF2, NDC80 kinetochore complex component [Homo
sapiens]
Length = 464
Score = 32.0 bits (71), Expect = 0.88
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 160 IRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLL----DHDNVK-YLKKILDELEK 214
+ QI + ESELKKL E + I K+++L + H++VK Y + ++++ K
Sbjct: 320 LEDQIESDESELKKLKTEENSFKRLMIVKKEKLATAQFKINKKHEDVKQYKRTVIEDCNK 379
Query: 215 VLDQ 218
V ++
Sbjct: 380 VQEK 383
>gi|117968353 NUF2, NDC80 kinetochore complex component [Homo
sapiens]
Length = 464
Score = 32.0 bits (71), Expect = 0.88
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 160 IRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLL----DHDNVK-YLKKILDELEK 214
+ QI + ESELKKL E + I K+++L + H++VK Y + ++++ K
Sbjct: 320 LEDQIESDESELKKLKTEENSFKRLMIVKKEKLATAQFKINKKHEDVKQYKRTVIEDCNK 379
Query: 215 VLDQ 218
V ++
Sbjct: 380 VQEK 383
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 31.6 bits (70), Expect = 1.1
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 168 ESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVK-YLKKILDELEKVLDQVET---EL 223
+ ++ +L +E LQE + + + LKS L D++ K L+K L+E++ + +++ E+
Sbjct: 805 DEKVLELEKEIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEM 864
Query: 224 QRRNEETPEEGQ 235
+ NE+T E Q
Sbjct: 865 KNANEKTRLENQ 876
Score = 28.9 bits (63), Expect = 7.4
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 160 IRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQV 219
+RS+ ++ L+K EE + Q + ++LK + DNVK L++ ++++ ++
Sbjct: 141 VRSKYSEDKANLQKQLEEAMNTQ---LELSEQLKFQNNSEDNVKKLQEEIEKIRPGFEEQ 197
Query: 220 ETELQRRNEETPEEGQQ 236
LQ++ + T +E ++
Sbjct: 198 ILYLQKQLDATTDEKKE 214
>gi|169208458 PREDICTED: similar to golgi autoantigen, golgin
subfamily a-like [Homo sapiens]
Length = 432
Score = 31.6 bits (70), Expect = 1.1
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 107 PRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGN 166
P P K H R+ L+S+ G L E+ + M+ + R ++
Sbjct: 152 PPAGPSKVEQLQDETNHLRKELESV-------GRQLQAEVENNQML-SLLNRRQEERLRE 203
Query: 167 TESELKKLAEENPDLQEAYIAKQKRLKS---KLLDHDNVKYLKKILDELEKVLDQVETEL 223
E L++ E + +E +++RL+ +L + + + +++L+E+EK+L Q
Sbjct: 204 QEERLREQEERLCEQEERLCEQEERLREQEERLCEQEKLPGQERLLEEVEKLLKQ----- 258
Query: 224 QRRNEE 229
+RR EE
Sbjct: 259 ERRQEE 264
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/118 (19%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 126 ELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDL-QEA 184
E LD +A H ++ +L+ ++++ + + + + +L ++ D+ +E
Sbjct: 498 EELDRQNQEATKHMILIKDQLSKQQNEGDSIISKLKQDLNDEKKRVHQLEDDKMDITKEL 557
Query: 185 YIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQV------ETELQRRNEETPEEGQQ 236
+ K+K ++S++ +D +K+ D++E ++DQ+ +Q+ N E E +Q
Sbjct: 558 DVQKEKLIQSEVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKENLELKEHIRQ 615
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,295,810
Number of Sequences: 37866
Number of extensions: 577250
Number of successful extensions: 2607
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 2463
Number of HSP's gapped (non-prelim): 269
length of query: 358
length of database: 18,247,518
effective HSP length: 103
effective length of query: 255
effective length of database: 14,347,320
effective search space: 3658566600
effective search space used: 3658566600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.