Guide to the Human Genome
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Search of human proteins with 4506403

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506403 G protein-coupled receptor, family C, group 5,
member A [Homo sapiens]
         (357 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506403 G protein-coupled receptor, family C, group 5, member...   723   0.0  
gi|8923705 G protein-coupled receptor, family C, group 5, member...   280   1e-75
gi|40217833 G protein-coupled receptor family C, group 5, member...   208   5e-54
gi|40217831 G protein-coupled receptor family C, group 5, member...   208   5e-54
gi|7706451 G protein-coupled receptor, family C, group 5, member...   193   2e-49
gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo s...    47   3e-05
gi|66529100 glutamate receptor, metabotropic 2 isoform a precurs...    45   1e-04
gi|194248052 glutamate receptor, metabotropic 2 isoform b [Homo ...    39   0.009
gi|112807234 G protein-coupled receptor, family C, group 6, memb...    36   0.046
gi|37577159 calcium-sensing receptor [Homo sapiens]                    35   0.079
gi|32401435 G protein-coupled receptor 141 [Homo sapiens]              32   0.67 
gi|5870893 solute carrier family 38, member 3 [Homo sapiens]           32   0.87 
gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Ho...    31   1.5  
gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Ho...    31   1.5  
gi|148271104 patched domain containing 1 [Homo sapiens]                31   1.9  
gi|239756657 PREDICTED: hypothetical protein XP_002344969 [Homo ...    30   3.3  
gi|239751140 PREDICTED: hypothetical protein XP_002347723 [Homo ...    30   3.3  
gi|239745633 PREDICTED: hypothetical protein XP_002344148 [Homo ...    30   3.3  
gi|7662058 tectonin beta-propeller repeat containing 2 [Homo sap...    29   5.7  
gi|50083289 selenoprotein I [Homo sapiens]                             28   9.7  

>gi|4506403 G protein-coupled receptor, family C, group 5, member A
           [Homo sapiens]
          Length = 357

 Score =  723 bits (1865), Expect = 0.0
 Identities = 357/357 (100%), Positives = 357/357 (100%)

Query: 1   MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN 60
           MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
Sbjct: 1   MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN 60

Query: 61  RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT 120
           RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
Sbjct: 61  RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT 120

Query: 121 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL 180
           KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
Sbjct: 121 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL 180

Query: 181 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW 240
           LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW
Sbjct: 181 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW 240

Query: 241 DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY 300
           DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY
Sbjct: 241 DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY 300

Query: 301 SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS 357
           SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS
Sbjct: 301 SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS 357


>gi|8923705 G protein-coupled receptor, family C, group 5, member D
           [Homo sapiens]
          Length = 345

 Score =  280 bits (716), Expect = 1e-75
 Identities = 152/332 (45%), Positives = 206/332 (62%), Gaps = 9/332 (2%)

Query: 17  YYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVL 76
           Y+ LCD    WGI+LE++A  G+V ++  +L    L+ K+QD ++  +LPTQ LFLL VL
Sbjct: 12  YFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCSQWNVLPTQLLFLLSVL 71

Query: 77  GIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKPLSLLVILG 136
           G+FGL FAFII L+  T P R+FLFG+LF++CFSCLLAHA +L KLVRG    S   IL 
Sbjct: 72  GLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLVKLVRGCVSFSWTTILC 131

Query: 137 LAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLLTYVLFLMALTFLMSS 196
           +A+G SL+Q +IA EY+ L M R    +F  ++  + N DFV+LL YVLFLMALTF +S 
Sbjct: 132 IAIGCSLLQIIIATEYVTLIMTRG--MMFVNMTPCQLNVDFVVLLVYVLFLMALTFFVSK 189

Query: 197 FTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLML--PDFDR--RWDDTILSSALAAN 252
            TFCG    WK+HG  I++T+L SI IWV WI++L+   P F R  +WDD ++  AL  N
Sbjct: 190 ATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQRQPQWDDPVVCIALVTN 249

Query: 253 GWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAYSQEEITQGFEET 312
            WVFLL Y+ PE  +L +     + P++   C     + S+ VEN+  S+   + G EE 
Sbjct: 250 AWVFLLLYIVPELCILYRSCR-QECPLQGNACPVTAYQHSFQVENQELSRARDSDGAEE- 307

Query: 313 GDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWP 344
            D     Y T  Q Q   P +E  IP+A   P
Sbjct: 308 -DVALTSYGTPIQPQTVDPTQECFIPQAKLSP 338


>gi|40217833 G protein-coupled receptor family C, group 5, member C
           isoform b [Homo sapiens]
          Length = 453

 Score =  208 bits (530), Expect = 5e-54
 Identities = 125/322 (38%), Positives = 176/322 (54%), Gaps = 23/322 (7%)

Query: 5   VPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKM 64
           VP GC  GL   YY LCD++ AWGIVLE VA AG+VT+    + L   +  VQD+ +R +
Sbjct: 39  VPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSL 98

Query: 65  LPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVR 124
           L TQ  FLLG LG+F L FA ++  D ST  +R FLFG+LF+ICFSCL AH  +L  L R
Sbjct: 99  LGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLAR 158

Query: 125 GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNR--------TNVNVFSELSAP--RRN 174
                   VI  +A+  +LV+ +I  E++++T+ R         N +    +++P    N
Sbjct: 159 KNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIAN 218

Query: 175 EDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLP 234
            DFV+ L YV+ L+   FL +    CG +  W++HG  + LT   S+AIWV WI +    
Sbjct: 219 MDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYG 278

Query: 235 DFDRR---WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVE---------DA 282
           +       WDD  L+ ALAAN W F+L YV PE   +TK      Y  +         + 
Sbjct: 279 NKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYET 338

Query: 283 FCKPQLVKKSYGVENRAYSQEE 304
             K Q  +  + VEN+A+S +E
Sbjct: 339 ILKEQKGQSMF-VENKAFSMDE 359


>gi|40217831 G protein-coupled receptor family C, group 5, member C
           isoform a [Homo sapiens]
          Length = 486

 Score =  208 bits (530), Expect = 5e-54
 Identities = 125/322 (38%), Positives = 176/322 (54%), Gaps = 23/322 (7%)

Query: 5   VPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKM 64
           VP GC  GL   YY LCD++ AWGIVLE VA AG+VT+    + L   +  VQD+ +R +
Sbjct: 72  VPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSL 131

Query: 65  LPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVR 124
           L TQ  FLLG LG+F L FA ++  D ST  +R FLFG+LF+ICFSCL AH  +L  L R
Sbjct: 132 LGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLAR 191

Query: 125 GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNR--------TNVNVFSELSAP--RRN 174
                   VI  +A+  +LV+ +I  E++++T+ R         N +    +++P    N
Sbjct: 192 KNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIAN 251

Query: 175 EDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLP 234
            DFV+ L YV+ L+   FL +    CG +  W++HG  + LT   S+AIWV WI +    
Sbjct: 252 MDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYG 311

Query: 235 DFDRR---WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVE---------DA 282
           +       WDD  L+ ALAAN W F+L YV PE   +TK      Y  +         + 
Sbjct: 312 NKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYET 371

Query: 283 FCKPQLVKKSYGVENRAYSQEE 304
             K Q  +  + VEN+A+S +E
Sbjct: 372 ILKEQKGQSMF-VENKAFSMDE 392


>gi|7706451 G protein-coupled receptor, family C, group 5, member B
           precursor [Homo sapiens]
          Length = 403

 Score =  193 bits (491), Expect = 2e-49
 Identities = 117/320 (36%), Positives = 180/320 (56%), Gaps = 20/320 (6%)

Query: 8   GCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPT 67
           GC   L  +Y  LCD    WGIV+E VA AG + ++  ML L + +  +++  ++  +  
Sbjct: 36  GCGLDLLPQYVSLCDLDAIWGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGL 95

Query: 68  QFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRK 127
            FLFLLG LG+FGLTFAFII  D +    R FL+G+LF++CFSCLL+ A  + +LVR   
Sbjct: 96  HFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRLVRHGT 155

Query: 128 PLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLLTYVLFL 187
             +   ++GLA+   LVQ +IA+E++VLT+ R      +  +      DFV+ L Y + L
Sbjct: 156 GPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRD-----TRPACAYEPMDFVMALIYDMVL 210

Query: 188 MALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRR----WDDT 243
           + +T  ++ FT CG F  WK +GA + +T  LS+ IWVAW+T+ +  +   +    W+D 
Sbjct: 211 LVVTLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDP 270

Query: 244 ILSSALAANGWVFLLAYVSPEF---WLLTKQRNPMDY-------PVEDAFCKPQLVKKSY 293
            L+  LAA+GWVF++ +  PE     L   Q N  +Y         E AF +   + ++Y
Sbjct: 271 TLAITLAASGWVFVIFHAIPEIHCTLLPALQENTPNYFDTSQPRMRETAFEEDVQLPRAY 330

Query: 294 GVENRAYSQEEITQGFEETG 313
            +EN+A+S +E        G
Sbjct: 331 -MENKAFSMDEHNAALRTAG 349


>gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo
           sapiens]
          Length = 879

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 29/266 (10%)

Query: 25  EAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPTQ----FLFLLGVLGIFG 80
           +AW I   T+A  G      FM T  ++   ++ +N   +  +     ++ L GV   + 
Sbjct: 574 DAWAIGPVTIACLG------FMCTCMVVTVFIKHNNTPLVKASGRELCYILLFGVGLSYC 627

Query: 81  LTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKP-------LSLLV 133
           +TF FI          R    G  F+IC+S LL     + ++  G K        +S   
Sbjct: 628 MTFFFIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQRPKFISPSS 687

Query: 134 ILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSE------LSAPRRNEDFVLLLTY--VL 185
            + + +G  LVQ V+   +++L    T     +E      L    ++   ++ LTY  +L
Sbjct: 688 QVFICLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVILKCNVKDSSMLISLTYDVIL 747

Query: 186 FLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTIL 245
            ++   +   +     +F   K  G     TM  +  IW+A++ +  +   D R   T +
Sbjct: 748 VILCTVYAFKTRKCPENFNEAKFIG----FTMYTTCIIWLAFLPIFYVTSSDYRVQTTTM 803

Query: 246 SSALAANGWVFLLAYVSPEFWLLTKQ 271
             +++ +G+V L    +P+  ++  Q
Sbjct: 804 CISVSLSGFVVLGCLFAPKVHIILFQ 829


>gi|66529100 glutamate receptor, metabotropic 2 isoform a precursor
           [Homo sapiens]
          Length = 872

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 29/266 (10%)

Query: 25  EAWGIVLETVATAGVVTSVAFMLTLPILV----CKVQDSNRRKMLPTQFLFLLGVLGIFG 80
           +AW +   T+A  G   ++A +  L + V      V  ++ R++    ++ L GV   + 
Sbjct: 565 DAWAVGPVTIACLG---ALATLFVLGVFVRHNATPVVKASGRELC---YILLGGVFLCYC 618

Query: 81  LTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRG-----RKPLSLLVIL 135
           +TF FI     +    R    G  FS+C+S LL     + ++  G     ++P  +    
Sbjct: 619 MTFIFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPAS 678

Query: 136 GLAVGFSLV--QDVIAIEYIVLTMNRTNVNVFSE------LSAPRRNEDFVLLLTYVLFL 187
            +A+  +L+  Q +I + ++V+    T      E      L    R+   +  L Y + L
Sbjct: 679 QVAICLALISGQLLIVVAWLVVEAPGTGKETAPERREVVTLRCNHRDASMLGSLAYNVLL 738

Query: 188 MALTFLMSSFT--FCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTIL 245
           +AL  L +  T     +F   K  G  +Y T +    IW+A++ +  +   D R   T +
Sbjct: 739 IALCTLYAFKTRKCPENFNEAKFIGFTMYTTCI----IWLAFLPIFYVTSSDYRVQTTTM 794

Query: 246 SSALAANGWVFLLAYVSPEFWLLTKQ 271
             +++ +G V L    +P+  ++  Q
Sbjct: 795 CVSVSLSGSVVLGCLFAPKLHIILFQ 820


>gi|194248052 glutamate receptor, metabotropic 2 isoform b [Homo
           sapiens]
          Length = 254

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 19/206 (9%)

Query: 81  LTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRG-----RKPLSLLVIL 135
           +TF FI     +    R    G  FS+C+S LL     + ++  G     ++P  +    
Sbjct: 1   MTFIFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPAS 60

Query: 136 GLAVGFSLV--QDVIAIEYIVLTMNRTNVNVFSE------LSAPRRNEDFVLLLTYVLFL 187
            +A+  +L+  Q +I + ++V+    T      E      L    R+   +  L Y + L
Sbjct: 61  QVAICLALISGQLLIVVAWLVVEAPGTGKETAPERREVVTLRCNHRDASMLGSLAYNVLL 120

Query: 188 MALTFLMSSFT--FCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTIL 245
           +AL  L +  T     +F   K  G  +Y T +    IW+A++ +  +   D R   T +
Sbjct: 121 IALCTLYAFKTRKCPENFNEAKFIGFTMYTTCI----IWLAFLPIFYVTSSDYRVQTTTM 176

Query: 246 SSALAANGWVFLLAYVSPEFWLLTKQ 271
             +++ +G V L    +P+  ++  Q
Sbjct: 177 CVSVSLSGSVVLGCLFAPKLHIILFQ 202


>gi|112807234 G protein-coupled receptor, family C, group 6, member
           A [Homo sapiens]
          Length = 926

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 22/166 (13%)

Query: 79  FGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSL-------TKLVRGRKPL-S 130
           F  T  FI      T  TR  +FG+ F++C SC+L  ++ +        KL +  K L  
Sbjct: 644 FASTSFFIGEPQDFTCKTRQTMFGVSFTLCISCILTKSLKILLAFSFDPKLQKFLKCLYR 703

Query: 131 LLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPR------RNEDFVLLLTYV 184
            ++I+    G   +Q VI   +++       VNV    S PR           +   T +
Sbjct: 704 PILIIFTCTG---IQVVICTLWLIFAAPTVEVNV----SLPRVIILECEEGSILAFGTML 756

Query: 185 LFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITL 230
            ++  L F+   F F G +  +      I   ML+    W+ +I +
Sbjct: 757 GYIAILAFICFIFAFKGKYENY-NEAKFITFGMLIYFIAWITFIPI 801


>gi|37577159 calcium-sensing receptor [Homo sapiens]
          Length = 1078

 Score = 35.4 bits (80), Expect = 0.079
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 29/223 (13%)

Query: 25  EAWGIVLETVATAGVVTSVAFMLTLPILVCK---VQDSNRRKMLPTQFLFLLGVLGIFGL 81
           E +GI L   A  G+  + AF+L + I       V+ +NR       +L L  +L  F  
Sbjct: 610 EPFGIALTLFAVLGIFLT-AFVLGVFIKFRNTPIVKATNRE----LSYLLLFSLLCCFSS 664

Query: 82  TFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKPLSL-LVILGLAVG 140
           +  FI      T   R   FGI F +C SC+L     +  +   + P S      GL + 
Sbjct: 665 SLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWGLNLQ 724

Query: 141 FSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRN---EDFVLLLT-------YVLFLMAL 190
           F LV     ++ ++       + +++   +  RN   ED ++ +T        + FL+  
Sbjct: 725 FLLVFLCTFMQIVICV-----IWLYTAPPSSYRNQELEDEIIFITCHEGSLMALGFLIGY 779

Query: 191 TFLMSSFTFCGSFTGWK-----RHGAHIYLTMLLSIAIWVAWI 228
           T L+++  F  +F   K          I  +ML+   +W+++I
Sbjct: 780 TCLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFI 822


>gi|32401435 G protein-coupled receptor 141 [Homo sapiens]
          Length = 305

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLLTYVLFLM 188
           L  +V++G  VG      VI+I ++++ MN  +V   + ++    +  F+L + + L  +
Sbjct: 23  LYFIVLIGGLVG------VISILFLLVKMNTRSVTTMAVINLVVVHSVFLLTVPFRLTYL 76

Query: 189 ALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTILSSA 248
                M    FC  F     H  H+YLT L  + I V    +         +   + + A
Sbjct: 77  IKKTWMFGLPFC-KFVSAMLH-IHMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVA 134

Query: 249 LAANGWVFLLAYVSP 263
            +A  W  ++  V P
Sbjct: 135 ASAGMWTLVIVIVVP 149


>gi|5870893 solute carrier family 38, member 3 [Homo sapiens]
          Length = 504

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 23/157 (14%)

Query: 11  NGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPTQ-- 68
           NG++S+      K + + +++  V  A V+T+V   LT+PI++  V+ + ++ + P Q  
Sbjct: 346 NGVESELLHTYSKVDPFDVLILCVRVA-VLTAVT--LTVPIVLFPVRRAIQQMLFPNQEF 402

Query: 69  -----FLFLLGVLGIFGLTFAF---IIGLDGSTGPTR--FFLFGILFSICFSCLLAHAVS 118
                 L  +G+L    L   F   I+G+ G  G T   F +F       F  +    + 
Sbjct: 403 SWLRHVLIAVGLLTCINLLVIFAPNILGIFGVIGATSAPFLIF------IFPAIFYFRIM 456

Query: 119 LTKLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVL 155
            T+    R    +L +    +GF L+   +++ +I++
Sbjct: 457 PTEKEPARSTPKILALCFAMLGFLLM--TMSLSFIII 491


>gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Homo
           sapiens]
          Length = 492

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 174 NEDFVLLLTYVLFLMALTFLMSSFTFCGSF--TGWKRHGAHIYLTMLLSIAIWVAWITLL 231
           N  + +   + L ++    +  SF +  S   T +K  G   YL  +++ + WV +I  L
Sbjct: 337 NHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYI--L 394

Query: 232 MLPDFDRRWDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPM 275
           ML  F   W   +L + L     +  L   S E   L KQ   M
Sbjct: 395 MLATFHFSWSTFLLLNQLFQ---IAFLGLTSHERISLQKQSKHM 435


>gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Homo
           sapiens]
          Length = 622

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 174 NEDFVLLLTYVLFLMALTFLMSSFTFCGSF--TGWKRHGAHIYLTMLLSIAIWVAWITLL 231
           N  + +   + L ++    +  SF +  S   T +K  G   YL  +++ + WV +I  L
Sbjct: 467 NHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYI--L 524

Query: 232 MLPDFDRRWDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPM 275
           ML  F   W   +L + L     +  L   S E   L KQ   M
Sbjct: 525 MLATFHFSWSTFLLLNQLFQ---IAFLGLTSHERISLQKQSKHM 565


>gi|148271104 patched domain containing 1 [Homo sapiens]
          Length = 888

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 39  VVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVLGIFGLTFAFIIGLDG 91
           +VTS+  ++T+ IL C +QD  R K  P   L  L  + +  LT A II L G
Sbjct: 272 LVTSLILVVTMAILCCSMQDCVRSK--PWLGLLGLVTISLATLTAAGIINLTG 322


>gi|239756657 PREDICTED: hypothetical protein XP_002344969 [Homo
           sapiens]
          Length = 138

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLL 181
           +SL V L + +  SL +++  + ++   +  +++  FS LS+ RRN  F LLL
Sbjct: 21  MSLAVELTVLMPASLRKELCLLRWLARLLLDSDLRSFSPLSSERRNSPFFLLL 73


>gi|239751140 PREDICTED: hypothetical protein XP_002347723 [Homo
           sapiens]
          Length = 138

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLL 181
           +SL V L + +  SL +++  + ++   +  +++  FS LS+ RRN  F LLL
Sbjct: 21  MSLAVELTVLMPASLRKELCLLRWLARLLLDSDLRSFSPLSSERRNSPFFLLL 73


>gi|239745633 PREDICTED: hypothetical protein XP_002344148 [Homo
           sapiens]
          Length = 138

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLL 181
           +SL V L + +  SL +++  + ++   +  +++  FS LS+ RRN  F LLL
Sbjct: 21  MSLAVELTVLMPASLRKELCLLRWLARLLLDSDLRSFSPLSSERRNSPFFLLL 73


>gi|7662058 tectonin beta-propeller repeat containing 2 [Homo sapiens]
          Length = 1411

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 240  WDDTILSSALAANGWVFLLAYVSPE-----FWLLTKQRNPMDYPVEDAFCKPQLVKKSYG 294
            W+  +     +A  W F+LA  +P       WL    ++      + A  +P  V+    
Sbjct: 1109 WNHVVPRGTASATKWAFVLASAAPTKEGSFLWLCQSSKDLCSVSAQSAQSRPSTVQLPPE 1168

Query: 295  VENRAYS 301
             E RAY+
Sbjct: 1169 AEMRAYA 1175


>gi|50083289 selenoprotein I [Homo sapiens]
          Length = 397

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 20/84 (23%)

Query: 71  FLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKPLS 130
           F++ V  IFG          GSTG + F L+ +L+ + FS +L+H     K   G     
Sbjct: 136 FVVTVYSIFGR---------GSTGVSVFVLYLLLWVVLFSFILSH---WEKYNTG----- 178

Query: 131 LLVILGLAVGFSLVQDVIAIEYIV 154
              IL L  G+ + Q  I+  YIV
Sbjct: 179 ---ILFLPWGYDISQVTISFVYIV 199


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,050,252
Number of Sequences: 37866
Number of extensions: 535181
Number of successful extensions: 1451
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1430
Number of HSP's gapped (non-prelim): 21
length of query: 357
length of database: 18,247,518
effective HSP length: 103
effective length of query: 254
effective length of database: 14,347,320
effective search space: 3644219280
effective search space used: 3644219280
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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