BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4506403 G protein-coupled receptor, family C, group 5, member A [Homo sapiens] (357 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4506403 G protein-coupled receptor, family C, group 5, member... 723 0.0 gi|8923705 G protein-coupled receptor, family C, group 5, member... 280 1e-75 gi|40217833 G protein-coupled receptor family C, group 5, member... 208 5e-54 gi|40217831 G protein-coupled receptor family C, group 5, member... 208 5e-54 gi|7706451 G protein-coupled receptor, family C, group 5, member... 193 2e-49 gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo s... 47 3e-05 gi|66529100 glutamate receptor, metabotropic 2 isoform a precurs... 45 1e-04 gi|194248052 glutamate receptor, metabotropic 2 isoform b [Homo ... 39 0.009 gi|112807234 G protein-coupled receptor, family C, group 6, memb... 36 0.046 gi|37577159 calcium-sensing receptor [Homo sapiens] 35 0.079 gi|32401435 G protein-coupled receptor 141 [Homo sapiens] 32 0.67 gi|5870893 solute carrier family 38, member 3 [Homo sapiens] 32 0.87 gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Ho... 31 1.5 gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Ho... 31 1.5 gi|148271104 patched domain containing 1 [Homo sapiens] 31 1.9 gi|239756657 PREDICTED: hypothetical protein XP_002344969 [Homo ... 30 3.3 gi|239751140 PREDICTED: hypothetical protein XP_002347723 [Homo ... 30 3.3 gi|239745633 PREDICTED: hypothetical protein XP_002344148 [Homo ... 30 3.3 gi|7662058 tectonin beta-propeller repeat containing 2 [Homo sap... 29 5.7 gi|50083289 selenoprotein I [Homo sapiens] 28 9.7 >gi|4506403 G protein-coupled receptor, family C, group 5, member A [Homo sapiens] Length = 357 Score = 723 bits (1865), Expect = 0.0 Identities = 357/357 (100%), Positives = 357/357 (100%) Query: 1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN 60 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN Sbjct: 1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN 60 Query: 61 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT 120 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT Sbjct: 61 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT 120 Query: 121 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL 180 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL Sbjct: 121 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL 180 Query: 181 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW 240 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW Sbjct: 181 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW 240 Query: 241 DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY 300 DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY Sbjct: 241 DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY 300 Query: 301 SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS 357 SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS Sbjct: 301 SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS 357 >gi|8923705 G protein-coupled receptor, family C, group 5, member D [Homo sapiens] Length = 345 Score = 280 bits (716), Expect = 1e-75 Identities = 152/332 (45%), Positives = 206/332 (62%), Gaps = 9/332 (2%) Query: 17 YYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVL 76 Y+ LCD WGI+LE++A G+V ++ +L L+ K+QD ++ +LPTQ LFLL VL Sbjct: 12 YFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCSQWNVLPTQLLFLLSVL 71 Query: 77 GIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKPLSLLVILG 136 G+FGL FAFII L+ T P R+FLFG+LF++CFSCLLAHA +L KLVRG S IL Sbjct: 72 GLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLVKLVRGCVSFSWTTILC 131 Query: 137 LAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLLTYVLFLMALTFLMSS 196 +A+G SL+Q +IA EY+ L M R +F ++ + N DFV+LL YVLFLMALTF +S Sbjct: 132 IAIGCSLLQIIIATEYVTLIMTRG--MMFVNMTPCQLNVDFVVLLVYVLFLMALTFFVSK 189 Query: 197 FTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLML--PDFDR--RWDDTILSSALAAN 252 TFCG WK+HG I++T+L SI IWV WI++L+ P F R +WDD ++ AL N Sbjct: 190 ATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQRQPQWDDPVVCIALVTN 249 Query: 253 GWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAYSQEEITQGFEET 312 WVFLL Y+ PE +L + + P++ C + S+ VEN+ S+ + G EE Sbjct: 250 AWVFLLLYIVPELCILYRSCR-QECPLQGNACPVTAYQHSFQVENQELSRARDSDGAEE- 307 Query: 313 GDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWP 344 D Y T Q Q P +E IP+A P Sbjct: 308 -DVALTSYGTPIQPQTVDPTQECFIPQAKLSP 338 >gi|40217833 G protein-coupled receptor family C, group 5, member C isoform b [Homo sapiens] Length = 453 Score = 208 bits (530), Expect = 5e-54 Identities = 125/322 (38%), Positives = 176/322 (54%), Gaps = 23/322 (7%) Query: 5 VPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKM 64 VP GC GL YY LCD++ AWGIVLE VA AG+VT+ + L + VQD+ +R + Sbjct: 39 VPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSL 98 Query: 65 LPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVR 124 L TQ FLLG LG+F L FA ++ D ST +R FLFG+LF+ICFSCL AH +L L R Sbjct: 99 LGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLAR 158 Query: 125 GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNR--------TNVNVFSELSAP--RRN 174 VI +A+ +LV+ +I E++++T+ R N + +++P N Sbjct: 159 KNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIAN 218 Query: 175 EDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLP 234 DFV+ L YV+ L+ FL + CG + W++HG + LT S+AIWV WI + Sbjct: 219 MDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYG 278 Query: 235 DFDRR---WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVE---------DA 282 + WDD L+ ALAAN W F+L YV PE +TK Y + + Sbjct: 279 NKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYET 338 Query: 283 FCKPQLVKKSYGVENRAYSQEE 304 K Q + + VEN+A+S +E Sbjct: 339 ILKEQKGQSMF-VENKAFSMDE 359 >gi|40217831 G protein-coupled receptor family C, group 5, member C isoform a [Homo sapiens] Length = 486 Score = 208 bits (530), Expect = 5e-54 Identities = 125/322 (38%), Positives = 176/322 (54%), Gaps = 23/322 (7%) Query: 5 VPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKM 64 VP GC GL YY LCD++ AWGIVLE VA AG+VT+ + L + VQD+ +R + Sbjct: 72 VPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSL 131 Query: 65 LPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVR 124 L TQ FLLG LG+F L FA ++ D ST +R FLFG+LF+ICFSCL AH +L L R Sbjct: 132 LGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLAR 191 Query: 125 GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNR--------TNVNVFSELSAP--RRN 174 VI +A+ +LV+ +I E++++T+ R N + +++P N Sbjct: 192 KNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIAN 251 Query: 175 EDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLP 234 DFV+ L YV+ L+ FL + CG + W++HG + LT S+AIWV WI + Sbjct: 252 MDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYG 311 Query: 235 DFDRR---WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVE---------DA 282 + WDD L+ ALAAN W F+L YV PE +TK Y + + Sbjct: 312 NKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYET 371 Query: 283 FCKPQLVKKSYGVENRAYSQEE 304 K Q + + VEN+A+S +E Sbjct: 372 ILKEQKGQSMF-VENKAFSMDE 392 >gi|7706451 G protein-coupled receptor, family C, group 5, member B precursor [Homo sapiens] Length = 403 Score = 193 bits (491), Expect = 2e-49 Identities = 117/320 (36%), Positives = 180/320 (56%), Gaps = 20/320 (6%) Query: 8 GCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPT 67 GC L +Y LCD WGIV+E VA AG + ++ ML L + + +++ ++ + Sbjct: 36 GCGLDLLPQYVSLCDLDAIWGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGL 95 Query: 68 QFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRK 127 FLFLLG LG+FGLTFAFII D + R FL+G+LF++CFSCLL+ A + +LVR Sbjct: 96 HFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRLVRHGT 155 Query: 128 PLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLLTYVLFL 187 + ++GLA+ LVQ +IA+E++VLT+ R + + DFV+ L Y + L Sbjct: 156 GPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRD-----TRPACAYEPMDFVMALIYDMVL 210 Query: 188 MALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRR----WDDT 243 + +T ++ FT CG F WK +GA + +T LS+ IWVAW+T+ + + + W+D Sbjct: 211 LVVTLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDP 270 Query: 244 ILSSALAANGWVFLLAYVSPEF---WLLTKQRNPMDY-------PVEDAFCKPQLVKKSY 293 L+ LAA+GWVF++ + PE L Q N +Y E AF + + ++Y Sbjct: 271 TLAITLAASGWVFVIFHAIPEIHCTLLPALQENTPNYFDTSQPRMRETAFEEDVQLPRAY 330 Query: 294 GVENRAYSQEEITQGFEETG 313 +EN+A+S +E G Sbjct: 331 -MENKAFSMDEHNAALRTAG 349 >gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo sapiens] Length = 879 Score = 46.6 bits (109), Expect = 3e-05 Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 29/266 (10%) Query: 25 EAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPTQ----FLFLLGVLGIFG 80 +AW I T+A G FM T ++ ++ +N + + ++ L GV + Sbjct: 574 DAWAIGPVTIACLG------FMCTCMVVTVFIKHNNTPLVKASGRELCYILLFGVGLSYC 627 Query: 81 LTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKP-------LSLLV 133 +TF FI R G F+IC+S LL + ++ G K +S Sbjct: 628 MTFFFIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQRPKFISPSS 687 Query: 134 ILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSE------LSAPRRNEDFVLLLTY--VL 185 + + +G LVQ V+ +++L T +E L ++ ++ LTY +L Sbjct: 688 QVFICLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVILKCNVKDSSMLISLTYDVIL 747 Query: 186 FLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTIL 245 ++ + + +F K G TM + IW+A++ + + D R T + Sbjct: 748 VILCTVYAFKTRKCPENFNEAKFIG----FTMYTTCIIWLAFLPIFYVTSSDYRVQTTTM 803 Query: 246 SSALAANGWVFLLAYVSPEFWLLTKQ 271 +++ +G+V L +P+ ++ Q Sbjct: 804 CISVSLSGFVVLGCLFAPKVHIILFQ 829 >gi|66529100 glutamate receptor, metabotropic 2 isoform a precursor [Homo sapiens] Length = 872 Score = 44.7 bits (104), Expect = 1e-04 Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 29/266 (10%) Query: 25 EAWGIVLETVATAGVVTSVAFMLTLPILV----CKVQDSNRRKMLPTQFLFLLGVLGIFG 80 +AW + T+A G ++A + L + V V ++ R++ ++ L GV + Sbjct: 565 DAWAVGPVTIACLG---ALATLFVLGVFVRHNATPVVKASGRELC---YILLGGVFLCYC 618 Query: 81 LTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRG-----RKPLSLLVIL 135 +TF FI + R G FS+C+S LL + ++ G ++P + Sbjct: 619 MTFIFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPAS 678 Query: 136 GLAVGFSLV--QDVIAIEYIVLTMNRTNVNVFSE------LSAPRRNEDFVLLLTYVLFL 187 +A+ +L+ Q +I + ++V+ T E L R+ + L Y + L Sbjct: 679 QVAICLALISGQLLIVVAWLVVEAPGTGKETAPERREVVTLRCNHRDASMLGSLAYNVLL 738 Query: 188 MALTFLMSSFT--FCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTIL 245 +AL L + T +F K G +Y T + IW+A++ + + D R T + Sbjct: 739 IALCTLYAFKTRKCPENFNEAKFIGFTMYTTCI----IWLAFLPIFYVTSSDYRVQTTTM 794 Query: 246 SSALAANGWVFLLAYVSPEFWLLTKQ 271 +++ +G V L +P+ ++ Q Sbjct: 795 CVSVSLSGSVVLGCLFAPKLHIILFQ 820 >gi|194248052 glutamate receptor, metabotropic 2 isoform b [Homo sapiens] Length = 254 Score = 38.5 bits (88), Expect = 0.009 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 19/206 (9%) Query: 81 LTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRG-----RKPLSLLVIL 135 +TF FI + R G FS+C+S LL + ++ G ++P + Sbjct: 1 MTFIFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPAS 60 Query: 136 GLAVGFSLV--QDVIAIEYIVLTMNRTNVNVFSE------LSAPRRNEDFVLLLTYVLFL 187 +A+ +L+ Q +I + ++V+ T E L R+ + L Y + L Sbjct: 61 QVAICLALISGQLLIVVAWLVVEAPGTGKETAPERREVVTLRCNHRDASMLGSLAYNVLL 120 Query: 188 MALTFLMSSFT--FCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTIL 245 +AL L + T +F K G +Y T + IW+A++ + + D R T + Sbjct: 121 IALCTLYAFKTRKCPENFNEAKFIGFTMYTTCI----IWLAFLPIFYVTSSDYRVQTTTM 176 Query: 246 SSALAANGWVFLLAYVSPEFWLLTKQ 271 +++ +G V L +P+ ++ Q Sbjct: 177 CVSVSLSGSVVLGCLFAPKLHIILFQ 202 >gi|112807234 G protein-coupled receptor, family C, group 6, member A [Homo sapiens] Length = 926 Score = 36.2 bits (82), Expect = 0.046 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 22/166 (13%) Query: 79 FGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSL-------TKLVRGRKPL-S 130 F T FI T TR +FG+ F++C SC+L ++ + KL + K L Sbjct: 644 FASTSFFIGEPQDFTCKTRQTMFGVSFTLCISCILTKSLKILLAFSFDPKLQKFLKCLYR 703 Query: 131 LLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPR------RNEDFVLLLTYV 184 ++I+ G +Q VI +++ VNV S PR + T + Sbjct: 704 PILIIFTCTG---IQVVICTLWLIFAAPTVEVNV----SLPRVIILECEEGSILAFGTML 756 Query: 185 LFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITL 230 ++ L F+ F F G + + I ML+ W+ +I + Sbjct: 757 GYIAILAFICFIFAFKGKYENY-NEAKFITFGMLIYFIAWITFIPI 801 >gi|37577159 calcium-sensing receptor [Homo sapiens] Length = 1078 Score = 35.4 bits (80), Expect = 0.079 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 29/223 (13%) Query: 25 EAWGIVLETVATAGVVTSVAFMLTLPILVCK---VQDSNRRKMLPTQFLFLLGVLGIFGL 81 E +GI L A G+ + AF+L + I V+ +NR +L L +L F Sbjct: 610 EPFGIALTLFAVLGIFLT-AFVLGVFIKFRNTPIVKATNRE----LSYLLLFSLLCCFSS 664 Query: 82 TFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKPLSL-LVILGLAVG 140 + FI T R FGI F +C SC+L + + + P S GL + Sbjct: 665 SLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWGLNLQ 724 Query: 141 FSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRN---EDFVLLLT-------YVLFLMAL 190 F LV ++ ++ + +++ + RN ED ++ +T + FL+ Sbjct: 725 FLLVFLCTFMQIVICV-----IWLYTAPPSSYRNQELEDEIIFITCHEGSLMALGFLIGY 779 Query: 191 TFLMSSFTFCGSFTGWK-----RHGAHIYLTMLLSIAIWVAWI 228 T L+++ F +F K I +ML+ +W+++I Sbjct: 780 TCLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFI 822 >gi|32401435 G protein-coupled receptor 141 [Homo sapiens] Length = 305 Score = 32.3 bits (72), Expect = 0.67 Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 8/135 (5%) Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLLTYVLFLM 188 L +V++G VG VI+I ++++ MN +V + ++ + F+L + + L + Sbjct: 23 LYFIVLIGGLVG------VISILFLLVKMNTRSVTTMAVINLVVVHSVFLLTVPFRLTYL 76 Query: 189 ALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRWDDTILSSA 248 M FC F H H+YLT L + I V + + + + A Sbjct: 77 IKKTWMFGLPFC-KFVSAMLH-IHMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVA 134 Query: 249 LAANGWVFLLAYVSP 263 +A W ++ V P Sbjct: 135 ASAGMWTLVIVIVVP 149 >gi|5870893 solute carrier family 38, member 3 [Homo sapiens] Length = 504 Score = 32.0 bits (71), Expect = 0.87 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 23/157 (14%) Query: 11 NGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKMLPTQ-- 68 NG++S+ K + + +++ V A V+T+V LT+PI++ V+ + ++ + P Q Sbjct: 346 NGVESELLHTYSKVDPFDVLILCVRVA-VLTAVT--LTVPIVLFPVRRAIQQMLFPNQEF 402 Query: 69 -----FLFLLGVLGIFGLTFAF---IIGLDGSTGPTR--FFLFGILFSICFSCLLAHAVS 118 L +G+L L F I+G+ G G T F +F F + + Sbjct: 403 SWLRHVLIAVGLLTCINLLVIFAPNILGIFGVIGATSAPFLIF------IFPAIFYFRIM 456 Query: 119 LTKLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVL 155 T+ R +L + +GF L+ +++ +I++ Sbjct: 457 PTEKEPARSTPKILALCFAMLGFLLM--TMSLSFIII 491 >gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Homo sapiens] Length = 492 Score = 31.2 bits (69), Expect = 1.5 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 174 NEDFVLLLTYVLFLMALTFLMSSFTFCGSF--TGWKRHGAHIYLTMLLSIAIWVAWITLL 231 N + + + L ++ + SF + S T +K G YL +++ + WV +I L Sbjct: 337 NHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYI--L 394 Query: 232 MLPDFDRRWDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPM 275 ML F W +L + L + L S E L KQ M Sbjct: 395 MLATFHFSWSTFLLLNQLFQ---IAFLGLTSHERISLQKQSKHM 435 >gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Homo sapiens] Length = 622 Score = 31.2 bits (69), Expect = 1.5 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 174 NEDFVLLLTYVLFLMALTFLMSSFTFCGSF--TGWKRHGAHIYLTMLLSIAIWVAWITLL 231 N + + + L ++ + SF + S T +K G YL +++ + WV +I L Sbjct: 467 NHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYI--L 524 Query: 232 MLPDFDRRWDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPM 275 ML F W +L + L + L S E L KQ M Sbjct: 525 MLATFHFSWSTFLLLNQLFQ---IAFLGLTSHERISLQKQSKHM 565 >gi|148271104 patched domain containing 1 [Homo sapiens] Length = 888 Score = 30.8 bits (68), Expect = 1.9 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 39 VVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVLGIFGLTFAFIIGLDG 91 +VTS+ ++T+ IL C +QD R K P L L + + LT A II L G Sbjct: 272 LVTSLILVVTMAILCCSMQDCVRSK--PWLGLLGLVTISLATLTAAGIINLTG 322 >gi|239756657 PREDICTED: hypothetical protein XP_002344969 [Homo sapiens] Length = 138 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/53 (32%), Positives = 31/53 (58%) Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLL 181 +SL V L + + SL +++ + ++ + +++ FS LS+ RRN F LLL Sbjct: 21 MSLAVELTVLMPASLRKELCLLRWLARLLLDSDLRSFSPLSSERRNSPFFLLL 73 >gi|239751140 PREDICTED: hypothetical protein XP_002347723 [Homo sapiens] Length = 138 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/53 (32%), Positives = 31/53 (58%) Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLL 181 +SL V L + + SL +++ + ++ + +++ FS LS+ RRN F LLL Sbjct: 21 MSLAVELTVLMPASLRKELCLLRWLARLLLDSDLRSFSPLSSERRNSPFFLLL 73 >gi|239745633 PREDICTED: hypothetical protein XP_002344148 [Homo sapiens] Length = 138 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/53 (32%), Positives = 31/53 (58%) Query: 129 LSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLLL 181 +SL V L + + SL +++ + ++ + +++ FS LS+ RRN F LLL Sbjct: 21 MSLAVELTVLMPASLRKELCLLRWLARLLLDSDLRSFSPLSSERRNSPFFLLL 73 >gi|7662058 tectonin beta-propeller repeat containing 2 [Homo sapiens] Length = 1411 Score = 29.3 bits (64), Expect = 5.7 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%) Query: 240 WDDTILSSALAANGWVFLLAYVSPE-----FWLLTKQRNPMDYPVEDAFCKPQLVKKSYG 294 W+ + +A W F+LA +P WL ++ + A +P V+ Sbjct: 1109 WNHVVPRGTASATKWAFVLASAAPTKEGSFLWLCQSSKDLCSVSAQSAQSRPSTVQLPPE 1168 Query: 295 VENRAYS 301 E RAY+ Sbjct: 1169 AEMRAYA 1175 >gi|50083289 selenoprotein I [Homo sapiens] Length = 397 Score = 28.5 bits (62), Expect = 9.7 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 20/84 (23%) Query: 71 FLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKPLS 130 F++ V IFG GSTG + F L+ +L+ + FS +L+H K G Sbjct: 136 FVVTVYSIFGR---------GSTGVSVFVLYLLLWVVLFSFILSH---WEKYNTG----- 178 Query: 131 LLVILGLAVGFSLVQDVIAIEYIV 154 IL L G+ + Q I+ YIV Sbjct: 179 ---ILFLPWGYDISQVTISFVYIV 199 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.140 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,050,252 Number of Sequences: 37866 Number of extensions: 535181 Number of successful extensions: 1451 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 1430 Number of HSP's gapped (non-prelim): 21 length of query: 357 length of database: 18,247,518 effective HSP length: 103 effective length of query: 254 effective length of database: 14,347,320 effective search space: 3644219280 effective search space used: 3644219280 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.