Guide to the Human Genome
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Search of human proteins with 4506127

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506127 phosphoribosyl pyrophosphate synthetase 1 [Homo
sapiens]
         (318 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506127 phosphoribosyl pyrophosphate synthetase 1 [Homo sapiens]   629   e-180
gi|4506129 phosphoribosyl pyrophosphate synthetase 2 isoform 2 [...   605   e-173
gi|84875539 phosphoribosyl pyrophosphate synthetase 2 isoform 1 ...   599   e-172
gi|28557709 phosphoribosyl pyrophosphate synthetase 1-like 1 [Ho...   593   e-170
gi|4506133 phosphoribosyl pyrophosphate synthetase-associated pr...   277   1e-74
gi|194018537 phosphoribosyl pyrophosphate synthetase-associated ...   259   2e-69
gi|169171357 PREDICTED: similar to hCG1804306 [Homo sapiens]          109   3e-24
gi|169172220 PREDICTED: similar to hCG1804306 [Homo sapiens]          109   3e-24
gi|169170962 PREDICTED: similar to hCG1804306 [Homo sapiens]          109   3e-24
gi|239508768 PREDICTED: similar to hCG1804306 [Homo sapiens]          109   3e-24
gi|14149657 NULP1 [Homo sapiens]                                       32   0.97 
gi|33563374 carboxylesterase 3 [Homo sapiens]                          30   2.8  
gi|31377634 guanylate binding protein 4 [Homo sapiens]                 30   3.7  
gi|116805342 human immunodeficiency virus type I enhancer bindin...    30   3.7  

>gi|4506127 phosphoribosyl pyrophosphate synthetase 1 [Homo sapiens]
          Length = 318

 Score =  629 bits (1621), Expect = e-180
 Identities = 318/318 (100%), Positives = 318/318 (100%)

Query: 1   MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
           MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
Sbjct: 1   MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60

Query: 61  GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
           GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61  GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120

Query: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
           ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180

Query: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
           IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240

Query: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
           ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300

Query: 301 RRTHNGESVSYLFSHVPL 318
           RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318


>gi|4506129 phosphoribosyl pyrophosphate synthetase 2 isoform 2
           [Homo sapiens]
          Length = 318

 Score =  605 bits (1559), Expect = e-173
 Identities = 303/318 (95%), Positives = 314/318 (98%)

Query: 1   MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
           MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1   MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60

Query: 61  GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
           GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
Sbjct: 61  GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120

Query: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
           ADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EW+NC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTS 180

Query: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
           IADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
Sbjct: 181 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240

Query: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
           AT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHC+KIQVIDISMILAEAI
Sbjct: 241 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI 300

Query: 301 RRTHNGESVSYLFSHVPL 318
           RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318


>gi|84875539 phosphoribosyl pyrophosphate synthetase 2 isoform 1
           [Homo sapiens]
          Length = 321

 Score =  599 bits (1545), Expect = e-172
 Identities = 303/321 (94%), Positives = 314/321 (97%), Gaps = 3/321 (0%)

Query: 1   MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
           MPNI +FSGSSHQDLSQ++ADRLGLELGKVVTKKFSNQET VEIGESVRGEDVYI+QSGC
Sbjct: 1   MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60

Query: 61  GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDK---SRAPISAKLVANMLS 117
           GEINDNLMELLIMINACKIAS+SRVTAVIPCFPYARQDKKDK   SRAPISAKLVANMLS
Sbjct: 61  GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKVGESRAPISAKLVANMLS 120

Query: 118 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKR 177
           VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVL+WIRENI+EW+NC IVSPDAGGAKR
Sbjct: 121 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKR 180

Query: 178 VTSIADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 237
           VTSIADRLNV+FALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL
Sbjct: 181 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 240

Query: 238 SAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILA 297
           SAGAT+VYAILTHGIFSGPAISRINNA FEAVVVTNTIPQEDKMKHC+KIQVIDISMILA
Sbjct: 241 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILA 300

Query: 298 EAIRRTHNGESVSYLFSHVPL 318
           EAIRRTHNGESVSYLFSHVPL
Sbjct: 301 EAIRRTHNGESVSYLFSHVPL 321


>gi|28557709 phosphoribosyl pyrophosphate synthetase 1-like 1 [Homo
           sapiens]
          Length = 318

 Score =  593 bits (1529), Expect = e-170
 Identities = 300/318 (94%), Positives = 309/318 (97%)

Query: 1   MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60
           MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEI ESVRGEDVYIVQSGC
Sbjct: 1   MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGC 60

Query: 61  GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120
           GEIND+LMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSR+PISAKLVANMLS+AG
Sbjct: 61  GEINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAG 120

Query: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS 180
           ADHIITMDLHASQIQGFFDIPVDNLYAEP VLKWIRENI EW+NC IVSPDAGGAKRVTS
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTS 180

Query: 181 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG 240
           IAD+LNVDFALIHKERKKANEVD +VLVGDV DRVAILVDDMADTC TIC AADKLLSAG
Sbjct: 181 IADQLNVDFALIHKERKKANEVDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAG 240

Query: 241 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI 300
           ATRVYAILTHGIFSGPAISRIN ACFEAVVVTNTIPQ++KMKHCSKI+VIDISMILAEAI
Sbjct: 241 ATRVYAILTHGIFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSKIRVIDISMILAEAI 300

Query: 301 RRTHNGESVSYLFSHVPL 318
           RRTHNGESVSYLFSHVPL
Sbjct: 301 RRTHNGESVSYLFSHVPL 318


>gi|4506133 phosphoribosyl pyrophosphate synthetase-associated
           protein 2 [Homo sapiens]
          Length = 369

 Score =  277 bits (708), Expect = 1e-74
 Identities = 154/342 (45%), Positives = 213/342 (62%), Gaps = 32/342 (9%)

Query: 8   SGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNL 67
           S SS  +LS+KIA+RLG+E+GKV   +  N+ET V+I ESVRG+DV+I+Q+   ++N  +
Sbjct: 27  SNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTI 86

Query: 68  MELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITM 127
           MELLIM+ ACK + A  +  VIP FPY++Q K  K R  I +KL+A+M+  AG  H+ITM
Sbjct: 87  MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMMCKAGLTHLITM 145

Query: 128 DLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNV 187
           DLH  +IQGFF+IPVDNL A P +L++I+E I ++RN  IV+     AKR  S A+RL +
Sbjct: 146 DLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRL 205

Query: 188 DFALIHKERKKA-------------------------------NEVDRMVLVGDVKDRVA 216
             A+IH E + A                                E   + +VGDV  R+A
Sbjct: 206 GIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIA 265

Query: 217 ILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIP 276
           I+VDD+ D   +   AA+ L   GA +++ + THG+ S  A  RI  +  + VVVTNTIP
Sbjct: 266 IIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIP 325

Query: 277 QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 318
            E +   C KI+ +DISMIL+EAIRR HNGES+SYLF ++ L
Sbjct: 326 HEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGL 367


>gi|194018537 phosphoribosyl pyrophosphate synthetase-associated
           protein 1 [Homo sapiens]
          Length = 385

 Score =  259 bits (662), Expect = 2e-69
 Identities = 150/345 (43%), Positives = 207/345 (60%), Gaps = 34/345 (9%)

Query: 5   KIFSGSSHQ---DLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCG 61
           ++FS +S     +L+++I +RLG ELGK V  + +N ET VEI ESVRG+D++I+Q+   
Sbjct: 38  RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 97

Query: 62  EINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 121
           ++N  +MELLIM  A K A A  +  VIP FPY++Q K  K R  I  KL+A+ML+ AG 
Sbjct: 98  DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 156

Query: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSI 181
            HIITMDLH  +IQGFF  PVDNL A P +L++I+E I  +RN  IV+     AKR  S 
Sbjct: 157 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 216

Query: 182 ADRLNVDFALIHKERK------------------------------KANEVDRMVLVGDV 211
           A+RL +  A+IH E +                               A E   + +VGDV
Sbjct: 217 AERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITVVGDV 276

Query: 212 KDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVV 271
             R+AI+VDD+ D   +   AA+ L   GA ++Y + THGI S  A   I  +  + VVV
Sbjct: 277 GGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVV 336

Query: 272 TNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
           TNT+P E +   C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 337 TNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 381


>gi|169171357 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  109 bits (273), Expect = 3e-24
 Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 6   IFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIND 65
           +  GSS   L+QK+  R GLELGKVVTKKFSNQE  +  GE +R +  Y++     +IND
Sbjct: 46  VLLGSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV----KIND 101

Query: 66  NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125
            L  L  M N CK   +S + AV+ C PYA+QD+KDKS   +SAKLVAN+ SVAG    +
Sbjct: 102 TLTSLA-MTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGV 160

Query: 126 TMDLHASQIQGFFDIPVDNL 145
                   I+ +  + VD++
Sbjct: 161 DRMFLVGDIKDWVAVLVDDI 180



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 202 VDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 237
           VDRM LVGD+KD VA+LVDD+ + CGT   +ADKLL
Sbjct: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195


>gi|169172220 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  109 bits (273), Expect = 3e-24
 Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 6   IFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIND 65
           +  GSS   L+QK+  R GLELGKVVTKKFSNQE  +  GE +R +  Y++     +IND
Sbjct: 46  VLLGSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV----KIND 101

Query: 66  NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125
            L  L  M N CK   +S + AV+ C PYA+QD+KDKS   +SAKLVAN+ SVAG    +
Sbjct: 102 TLTSLA-MTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGV 160

Query: 126 TMDLHASQIQGFFDIPVDNL 145
                   I+ +  + VD++
Sbjct: 161 DRMFLVGDIKDWVAVLVDDI 180



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 202 VDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 237
           VDRM LVGD+KD VA+LVDD+ + CGT   +ADKLL
Sbjct: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195


>gi|169170962 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  109 bits (273), Expect = 3e-24
 Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 6   IFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIND 65
           +  GSS   L+QK+  R GLELGKVVTKKFSNQE  +  GE +R +  Y++     +IND
Sbjct: 46  VLLGSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV----KIND 101

Query: 66  NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125
            L  L  M N CK   +S + AV+ C PYA+QD+KDKS   +SAKLVAN+ SVAG    +
Sbjct: 102 TLTSLA-MTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGV 160

Query: 126 TMDLHASQIQGFFDIPVDNL 145
                   I+ +  + VD++
Sbjct: 161 DRMFLVGDIKDWVAVLVDDI 180



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 202 VDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 237
           VDRM LVGD+KD VA+LVDD+ + CGT   +ADKLL
Sbjct: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195


>gi|239508768 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  109 bits (273), Expect = 3e-24
 Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 6   IFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIND 65
           +  GSS   L+QK+  R GLELGKVVTKKFSNQE  +  GE +R +  Y++     +IND
Sbjct: 46  VLLGSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV----KIND 101

Query: 66  NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125
            L  L  M N CK   +S + AV+ C PYA+QD+KDKS   +SAKLVAN+ SVAG    +
Sbjct: 102 TLTSLA-MTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGV 160

Query: 126 TMDLHASQIQGFFDIPVDNL 145
                   I+ +  + VD++
Sbjct: 161 DRMFLVGDIKDWVAVLVDDI 180



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 202 VDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 237
           VDRM LVGD+KD VA+LVDD+ + CGT   +ADKLL
Sbjct: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195


>gi|14149657 NULP1 [Homo sapiens]
          Length = 676

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 145 LYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEVDR 204
           L+ EPA + W+ EN+ E     + + DAG    V +  +R  V +      ++    + R
Sbjct: 509 LWKEPATMSWLEENVHE----VLQAVDAGD-PAVEACENRRKVLY------QRAPRNIHR 557

Query: 205 MVLVGDVKDRVAILVDDM 222
            V++ ++K+ VA L  D+
Sbjct: 558 HVILSEIKEAVAALPPDV 575


>gi|33563374 carboxylesterase 3 [Homo sapiens]
          Length = 571

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 12/54 (22%)

Query: 126 TMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEW---RNC-TIVSPDAGGA 175
           T D HA   QGF D+         A L+W++ENI+ +    NC T+    AGG+
Sbjct: 188 TGDEHAPGNQGFLDVV--------AALRWVQENIAPFGGDLNCVTVFGGSAGGS 233


>gi|31377634 guanylate binding protein 4 [Homo sapiens]
          Length = 640

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 150 AVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEVDRMVLVG 209
           A LK + E+++E     I S   GG         ++  D+ L+ ++  KANEV +  L  
Sbjct: 423 AELKRLSEHLTESILRGIFSVP-GGHNLYLEEKKQVEWDYKLVPRKGVKANEVLQNFLQS 481

Query: 210 DVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAIL 248
            V    +IL  D A T G    AA++ +   A +   +L
Sbjct: 482 QVVVEESILQSDKALTAGEKAIAAERAMKEAAEKEQELL 520


>gi|116805342 human immunodeficiency virus type I enhancer binding
            protein 1 [Homo sapiens]
          Length = 2718

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 6/45 (13%)

Query: 247  ILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVID 291
            +L   +FS P IS       EAV +TN +P ++    CSK  VI+
Sbjct: 1812 MLEKDVFSQPEISN------EAVNLTNVLPADNSSTGCSKFVVIE 1850


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,306,962
Number of Sequences: 37866
Number of extensions: 385887
Number of successful extensions: 774
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 20
length of query: 318
length of database: 18,247,518
effective HSP length: 102
effective length of query: 216
effective length of database: 14,385,186
effective search space: 3107200176
effective search space used: 3107200176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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