Search of human proteins with 4505489

Search of human proteins with 4505489

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505489 ornithine decarboxylase 1 [Homo sapiens]
         (461 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505489 ornithine decarboxylase 1 [Homo sapiens]                   937   0.0  
gi|16506287 ODC antizyme inhibitor-2 [Homo sapiens]                   471   e-133
gi|21361583 ornithine decarboxylase antizyme inhibitor [Homo sap...   441   e-124
gi|22538418 ornithine decarboxylase antizyme inhibitor [Homo sap...   441   e-124
gi|33667038 syntaxin 11 [Homo sapiens]                                 37   0.038
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]      31   2.1  
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]     31   2.1  
gi|48475052 secreted frizzled-related protein 2 precursor [Homo ...    30   4.6  
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           29   7.9  

>gi|4505489 ornithine decarboxylase 1 [Homo sapiens]
          Length = 461

 Score =  937 bits (2423), Expect = 0.0
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MNNFGNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALP 60
           MNNFGNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALP
Sbjct: 1   MNNFGNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALP 60

Query: 61  RVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQI 120
           RVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQI
Sbjct: 61  RVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQI 120

Query: 121 KYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLL 180
           KYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLL
Sbjct: 121 KYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLL 180

Query: 181 LERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPG 240
           LERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPG
Sbjct: 181 LERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPG 240

Query: 241 SEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQ 300
           SEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQ
Sbjct: 241 SEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQ 300

Query: 301 TGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTC 360
           TGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTC
Sbjct: 301 TGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTC 360

Query: 361 DGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQF 420
           DGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQF
Sbjct: 361 DGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQF 420

Query: 421 QNPDFPPEVEEQDASTLPVSCAWESGMKRHRAACASASINV 461
           QNPDFPPEVEEQDASTLPVSCAWESGMKRHRAACASASINV
Sbjct: 421 QNPDFPPEVEEQDASTLPVSCAWESGMKRHRAACASASINV 461


>gi|16506287 ODC antizyme inhibitor-2 [Homo sapiens]
          Length = 460

 Score =  471 bits (1211), Expect = e-133
 Identities = 231/440 (52%), Positives = 319/440 (72%), Gaps = 6/440 (1%)

Query: 8   EFDCHFLDEGFTAKDILDQKINEVS--SSDDKDAFYVADLGDILKKHLRWLKALPRVTPF 65
           E D   ++EGF+ +D+L +     S  ++D+  AF+VADLG I++KH  +LK LPRV PF
Sbjct: 7   ESDFVMVEEGFSTRDLLKELTLGASQATTDEVAAFFVADLGAIVRKHFCFLKCLPRVRPF 66

Query: 66  YAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAAN 125
           YAVKCN S  ++K LA  G GF CA+K E++LVQ +G+P  +II ANPCKQ++QIKYAA 
Sbjct: 67  YAVKCNSSPGVLKVLAQLGLGFSCANKAEMELVQHIGIPASKIICANPCKQIAQIKYAAK 126

Query: 126 NGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAK 185
           +G+Q+++FD+E+EL KV ++HP AK+VL IATDDS ++  LS+KFG +L++ R LLE AK
Sbjct: 127 HGIQLLSFDNEMELAKVVKSHPSAKMVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAK 186

Query: 186 ELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVK 245
           + +++VVGVSFH+GSGC DP+ + Q+I+DAR VF+MG E+G  M++LD+GGGFPG+E  K
Sbjct: 187 KHHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAK 246

Query: 246 LKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDD 305
           ++FEEI  VIN ALD YFP   GV I AE GRYYV SAFT+AV+IIAKK VL +Q G ++
Sbjct: 247 VRFEEIASVINSALDLYFPEGCGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREE 306

Query: 306 EDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDR 365
           E+ S+ +T +Y++++GVYG FN +L+D+    P+LQK+P  ++  YSSS+WGP  DG D 
Sbjct: 307 ENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDC 366

Query: 366 IVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQ-LMQQFQNPD 424
           + E   LP++HVGDW++F+NMGAYTV   S F G Q   I Y MS  AW+ L +Q    +
Sbjct: 367 VAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQACHITYAMSRVAWEALRRQLMAAE 426

Query: 425 FPPEVEEQDASTLPVSCAWE 444
              +VE       P+SC WE
Sbjct: 427 QEDDVE---GVCKPLSCGWE 443


>gi|21361583 ornithine decarboxylase antizyme inhibitor [Homo
           sapiens]
          Length = 448

 Score =  441 bits (1135), Expect = e-124
 Identities = 220/406 (54%), Positives = 292/406 (71%), Gaps = 5/406 (1%)

Query: 14  LDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDS 73
           LDEG    +++D  + E + +  K+AF+V DLG I+KKH +W   + ++ PFY VKCN +
Sbjct: 15  LDEGTNLGNVIDNYVYEHTLTG-KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSA 73

Query: 74  KAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTF 133
            A+++ LAA GTGF C+SK E+ LVQ LGVPPE IIY +PCKQVSQIKYAA  GV ++T 
Sbjct: 74  PAVLEILAALGTGFACSSKNEMALVQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTC 133

Query: 134 DSEVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVG 193
           D+E+EL K+AR HP AK++L IAT+D+      ++KFG TL+  R LLE AKEL++ ++G
Sbjct: 134 DNEIELKKIARNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIG 193

Query: 194 VSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITG 253
           V FHV S C + + +V A+SDARCVFDM  E+GF+M +LDIGGGF G+E    + EE+  
Sbjct: 194 VKFHVSSACKESQVYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTE---FQLEEVNH 250

Query: 254 VINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSD-DEDESSEQ 312
           VI+P LD YFP  SGV+II+EPG YYV+SAFTLAVNIIAKK+V  ++  S  ++  S E 
Sbjct: 251 VISPLLDIYFPEGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEP 310

Query: 313 TFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDL 372
            FMYY+NDGVYGSF   L +  +  P + K+ K DE  ++SS+WGP+CD LD+IVE C L
Sbjct: 311 AFMYYMNDGVYGSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLL 370

Query: 373 PEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQ 418
           PE++VGDW++F+NMGA +    S FN FQRP IYY+MS   W  MQ
Sbjct: 371 PELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIYYMMSFSDWYEMQ 416


>gi|22538418 ornithine decarboxylase antizyme inhibitor [Homo
           sapiens]
          Length = 448

 Score =  441 bits (1135), Expect = e-124
 Identities = 220/406 (54%), Positives = 292/406 (71%), Gaps = 5/406 (1%)

Query: 14  LDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDS 73
           LDEG    +++D  + E + +  K+AF+V DLG I+KKH +W   + ++ PFY VKCN +
Sbjct: 15  LDEGTNLGNVIDNYVYEHTLTG-KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSA 73

Query: 74  KAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTF 133
            A+++ LAA GTGF C+SK E+ LVQ LGVPPE IIY +PCKQVSQIKYAA  GV ++T 
Sbjct: 74  PAVLEILAALGTGFACSSKNEMALVQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTC 133

Query: 134 DSEVELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVG 193
           D+E+EL K+AR HP AK++L IAT+D+      ++KFG TL+  R LLE AKEL++ ++G
Sbjct: 134 DNEIELKKIARNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIG 193

Query: 194 VSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITG 253
           V FHV S C + + +V A+SDARCVFDM  E+GF+M +LDIGGGF G+E    + EE+  
Sbjct: 194 VKFHVSSACKESQVYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTE---FQLEEVNH 250

Query: 254 VINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSD-DEDESSEQ 312
           VI+P LD YFP  SGV+II+EPG YYV+SAFTLAVNIIAKK+V  ++  S  ++  S E 
Sbjct: 251 VISPLLDIYFPEGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEP 310

Query: 313 TFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDL 372
            FMYY+NDGVYGSF   L +  +  P + K+ K DE  ++SS+WGP+CD LD+IVE C L
Sbjct: 311 AFMYYMNDGVYGSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLL 370

Query: 373 PEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQ 418
           PE++VGDW++F+NMGA +    S FN FQRP IYY+MS   W  MQ
Sbjct: 371 PELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIYYMMSFSDWYEMQ 416


>gi|33667038 syntaxin 11 [Homo sapiens]
          Length = 287

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 5   GNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTP 64
           G++EFD    D  F    IL+    ++    D++   VAD+  + K++ R+L ++ R++ 
Sbjct: 22  GDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLS- 80

Query: 65  FYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQS 100
             ++K  D+ +I K + A G    C  +   +L ++
Sbjct: 81  --SIK-RDTNSIAKAIKARGEVIHCKLRAMKELSEA 113


>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
          Length = 1630

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 42  VADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAI---VKTLAATGTGFDCASKTEIQLV 98
           + ++   L K   W KALP  TP   +K  D++ I   +  +  TG GFD  +     LV
Sbjct: 305 IHNIPSTLDKQTNWSKALPLPTPEEKMK-QDAQVISSCIIPINVTGVGFDREASIRCSLV 363

Query: 99  QSLGVPPER 107
            S  V   R
Sbjct: 364 HSQSVLQRR 372


>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
          Length = 1474

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 42  VADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAI---VKTLAATGTGFDCASKTEIQLV 98
           + ++   L K   W KALP  TP   +K  D++ I   +  +  TG GFD  +     LV
Sbjct: 149 IHNIPSTLDKQTNWSKALPLPTPEEKMK-QDAQVISSCIIPINVTGVGFDREASIRCSLV 207

Query: 99  QSLGVPPER 107
            S  V   R
Sbjct: 208 HSQSVLQRR 216


>gi|48475052 secreted frizzled-related protein 2 precursor [Homo
           sapiens]
          Length = 295

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 338 PLLQKRPKPDEKYYSSSIWGPTC-DGLDRIVERC 370
           PL+ K+  PD K +  S++ P C D LD  ++ C
Sbjct: 81  PLVMKQCHPDTKKFLCSLFAPVCLDDLDETIQPC 114


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 415  QLMQQFQNPDFPPEVEEQDASTLPVSCAWESGMKR 449
            +L   F NP  PP ++++D ST  V      G +R
Sbjct: 2447 ELSPSFLNPPLPPSIDDRDLSTEEVRLVGRGGRRR 2481


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,661,156
Number of Sequences: 37866
Number of extensions: 760995
Number of successful extensions: 1538
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1528
Number of HSP's gapped (non-prelim): 9
length of query: 461
length of database: 18,247,518
effective HSP length: 106
effective length of query: 355
effective length of database: 14,233,722
effective search space: 5052971310
effective search space used: 5052971310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.