Search of human proteins with 4505163

Search of human proteins with 4505163

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505163 mannosyl (alpha-1,6-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
         (447 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505163 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylg...   939   0.0  
gi|21071077 dishevelled-associated activator of morphogenesis 1 ...    37   0.048
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ...    30   3.4  
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ...    30   3.4  
gi|222352127 sidekick 2 [Homo sapiens]                                 30   4.4  
gi|194328809 latent transforming growth factor beta binding prot...    30   5.8  
gi|18497288 latent transforming growth factor beta binding prote...    30   5.8  
gi|134142826 pericentriolar material 1 [Homo sapiens]                  29   7.6  
gi|31542298 hypothetical protein LOC51016 [Homo sapiens]               29   9.9  
gi|7662162 ALEX2 protein [Homo sapiens]                                29   9.9  
gi|29540562 ALEX2 protein [Homo sapiens]                               29   9.9  

>gi|4505163 mannosyl (alpha-1,6-)-glycoprotein
           beta-1,2-N-acetylglucosaminyltransferase [Homo sapiens]
          Length = 447

 Score =  939 bits (2428), Expect = 0.0
 Identities = 447/447 (100%), Positives = 447/447 (100%)

Query: 1   MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNEALAPPLLDAEPARGAGGRGGDHPSV 60
           MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNEALAPPLLDAEPARGAGGRGGDHPSV
Sbjct: 1   MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNEALAPPLLDAEPARGAGGRGGDHPSV 60

Query: 61  AVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQTLRNVDKAGTWAPRELVL 120
           AVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQTLRNVDKAGTWAPRELVL
Sbjct: 61  AVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQTLRNVDKAGTWAPRELVL 120

Query: 121 VVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFS 180
           VVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFS
Sbjct: 121 VVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFS 180

Query: 181 IQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHF 240
           IQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHF
Sbjct: 181 IQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHF 240

Query: 241 VWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSF 300
           VWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSF
Sbjct: 241 VWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSF 300

Query: 301 YGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPK 360
           YGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPK
Sbjct: 301 YGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPK 360

Query: 361 FWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQYMFPETLTISEKFTVV 420
           FWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQYMFPETLTISEKFTVV
Sbjct: 361 FWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQYMFPETLTISEKFTVV 420

Query: 421 AISPPRKNGGWGDIRDHELCKSYRRLQ 447
           AISPPRKNGGWGDIRDHELCKSYRRLQ
Sbjct: 421 AISPPRKNGGWGDIRDHELCKSYRRLQ 447


>gi|21071077 dishevelled-associated activator of morphogenesis 1
          [Homo sapiens]
          Length = 1078

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 53 RGGDHPSVAVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLN 99
          R  DHP +   +R  SN +  ++ PA+P P  + L + +  LV +L+
Sbjct: 19 RNNDHPEITYRLRNDSNFALQTMEPALPMPPVEELDVMFSELVDELD 65


>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
           sapiens]
          Length = 261

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 35  EALAPPLLDAEPARGAGGRGGDHPSVAVGIRRV----SNVSAASL-----VPAVPQPEAD 85
           + L PP     P RG  GRGG  P+   G  R     S+ SAA        PA P PE +
Sbjct: 178 QPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEME 237

Query: 86  NL 87
            +
Sbjct: 238 TI 239


>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
           sapiens]
          Length = 261

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 35  EALAPPLLDAEPARGAGGRGGDHPSVAVGIRRV----SNVSAASL-----VPAVPQPEAD 85
           + L PP     P RG  GRGG  P+   G  R     S+ SAA        PA P PE +
Sbjct: 178 QPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEME 237

Query: 86  NL 87
            +
Sbjct: 238 TI 239


>gi|222352127 sidekick 2 [Homo sapiens]
          Length = 2172

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 89   LRYRSLVYQLNFDQTLRNVDKAG-TWAPRELVLVVQVHNRPEYLRLLLDSLRK 140
            +RYR L+Y+     TLR ++  G TWA    +  ++  +RP   +  LD+L K
Sbjct: 1539 IRYRELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNK 1591


>gi|194328809 latent transforming growth factor beta binding protein
           3 isoform 1 [Homo sapiens]
          Length = 1303

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 17  VAACGFVLWSSNGRQRKNEALAPPLLDAE----PARGAGG-RGGDHPSVAVGIRRVSNVS 71
           V  C     +      +N+ L PP         PA GAGG  GG  P    G+ R   +S
Sbjct: 110 VVVCPLPCMNGGQCSSRNQCLCPPDFTGRFCQVPAGGAGGGTGGSGP----GLSRTGALS 165

Query: 72  AASLVPAVPQPEADNLTLRYRSLVYQLNFD 101
             +L P    PE D++  ++     Q+  D
Sbjct: 166 TGALPPLA--PEGDSVASKHAIYAVQVIAD 193


>gi|18497288 latent transforming growth factor beta binding protein
           3 isoform 2 [Homo sapiens]
          Length = 1256

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 17  VAACGFVLWSSNGRQRKNEALAPPLLDAE----PARGAGG-RGGDHPSVAVGIRRVSNVS 71
           V  C     +      +N+ L PP         PA GAGG  GG  P    G+ R   +S
Sbjct: 110 VVVCPLPCMNGGQCSSRNQCLCPPDFTGRFCQVPAGGAGGGTGGSGP----GLSRTGALS 165

Query: 72  AASLVPAVPQPEADNLTLRYRSLVYQLNFD 101
             +L P    PE D++  ++     Q+  D
Sbjct: 166 TGALPPLA--PEGDSVASKHAIYAVQVIAD 193


>gi|134142826 pericentriolar material 1 [Homo sapiens]
          Length = 2024

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query: 44  AEPARGAGGRGGDHPSVAVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQT 103
           + P R    R    PS +VG+  V N  + SL  +VP P A  ++         LN  + 
Sbjct: 430 SSPQRSVDQRSTSAPSASVGLAPVVNGESNSLTSSVPYPTASLVSQNESENEGHLNPSEK 489

Query: 104 LRNVDK 109
           L+ +++
Sbjct: 490 LQKLNE 495


>gi|31542298 hypothetical protein LOC51016 [Homo sapiens]
          Length = 208

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 310 KTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYL 353
           + W+ +   +G  L   A+Q L+   D  C  DD   DWT Q L
Sbjct: 151 RDWEESRQMVGALLEDRAHQHLV---DFDCHLDDIRQDWTNQRL 191


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/48 (35%), Positives = 21/48 (43%)

Query: 35  EALAPPLLDAEPARGAGGRGGDHPSVAVGIRRVSNVSAASLVPAVPQP 82
           EA+AP    AE   GAG +  +     VG +  S V AA      P P
Sbjct: 96  EAVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPP 143


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/48 (35%), Positives = 21/48 (43%)

Query: 35  EALAPPLLDAEPARGAGGRGGDHPSVAVGIRRVSNVSAASLVPAVPQP 82
           EA+AP    AE   GAG +  +     VG +  S V AA      P P
Sbjct: 96  EAVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPP 143


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,158,819
Number of Sequences: 37866
Number of extensions: 820439
Number of successful extensions: 1847
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1842
Number of HSP's gapped (non-prelim): 11
length of query: 447
length of database: 18,247,518
effective HSP length: 105
effective length of query: 342
effective length of database: 14,271,588
effective search space: 4880883096
effective search space used: 4880883096
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.