Guide to the Human Genome
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Name: GUSB Sequence: fasta or formatted (651aa) NCBI GI: 4504223
Description:

glucuronidase, beta

Referenced in:

Protein Glycosylation
Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         38           2
 C cysteine            0.9          6           1
 D aspartate           4.6         30           2
 E glutamate           5.7         37           2
 F phenylalanine       4.5         29           2
 G glycine             6.6         43           2
 H histidine           2.8         18           3
 I isoleucine          4.0         26           2
 K lysine              4.1         27           2
 L leucine             9.8         64           2
 M methionine          1.8         12           1
 N asparagine          4.3         28           2
 P proline             5.8         38           2
 Q glutamine           4.9         32           1
 R arginine            5.5         36           3
 S serine              6.5         42           2
 T threonine           5.8         38           2
 V valine              7.8         51           2
 W tryptophan          2.9         19           2
 Y tyrosine            5.7         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucuronidase, beta 
LOC650457             0.111   PREDICTED: similar to Beta-glucuronidase 
LOC100287078          0.070   PREDICTED: hypothetical protein XP_002342556 
LOC100287046          0.070   PREDICTED: hypothetical protein XP_002342555 
LOC100294451          0.054   PREDICTED: similar to hCG1820960 
LOC100288852          0.050   PREDICTED: hypothetical protein XP_002342575 
LOC100288916          0.048   PREDICTED: hypothetical protein XP_002342577 
MANBA                 0.018   mannosidase, beta A, lysosomal 
LOC100131514          0.006   PREDICTED: similar to hCG1747327, partial 
PPAT                  0.004   phosphoribosyl pyrophosphate amidotransferase propro...
PEX14                 0.004   peroxisomal biogenesis factor 14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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