Search of human proteins with 4503895

Search of human proteins with 4503895

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503895 galactokinase 1 [Homo sapiens]
         (392 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503895 galactokinase 1 [Homo sapiens]                             770   0.0  
gi|4503897 galactokinase 2 isoform 1 [Homo sapiens]                   159   3e-39
gi|48527957 galactokinase 2 isoform 2 [Homo sapiens]                  157   2e-38
gi|167001643 mevalonate kinase [Homo sapiens]                          48   1e-05
gi|4557769 mevalonate kinase [Homo sapiens]                            48   1e-05
gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...    32   0.76 
gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...    32   0.99 
gi|11863156 RECK protein precursor [Homo sapiens]                      32   1.3  
gi|13775238 plasmalemma vesicle associated protein [Homo sapiens]      31   2.2  
gi|239755742 PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) ...    30   2.9  
gi|8051593 GA binding protein transcription factor, beta subunit...    30   2.9  
gi|8051595 GA binding protein transcription factor, beta subunit...    30   2.9  
gi|7662180 glycine-, glutamate-, thienylcyclohexylpiperidine-bin...    30   2.9  
gi|92859701 myosin VI [Homo sapiens]                                   30   4.9  

>gi|4503895 galactokinase 1 [Homo sapiens]
          Length = 392

 Score =  770 bits (1988), Expect = 0.0
 Identities = 392/392 (100%), Positives = 392/392 (100%)

Query: 1   MAALRQPQVAELLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELM 60
           MAALRQPQVAELLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELM
Sbjct: 1   MAALRQPQVAELLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELM 60

Query: 61  TVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANYVKGVIQYYPAA 120
           TVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANYVKGVIQYYPAA
Sbjct: 61  TVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANYVKGVIQYYPAA 120

Query: 121 PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGM 180
           PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGM
Sbjct: 121 PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGM 180

Query: 181 PCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLASSEYPVRR 240
           PCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLASSEYPVRR
Sbjct: 181 PCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLASSEYPVRR 240

Query: 241 RQCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGDY 300
           RQCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGDY
Sbjct: 241 RQCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGDY 300

Query: 301 RAFGRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASA 360
           RAFGRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASA
Sbjct: 301 RAFGRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASA 360

Query: 361 APHAMRHIQEHYGGTATFYLSQAADGAKVLCL 392
           APHAMRHIQEHYGGTATFYLSQAADGAKVLCL
Sbjct: 361 APHAMRHIQEHYGGTATFYLSQAADGAKVLCL 392


>gi|4503897 galactokinase 2 isoform 1 [Homo sapiens]
          Length = 458

 Score =  159 bits (403), Expect = 3e-39
 Identities = 127/429 (29%), Positives = 194/429 (45%), Gaps = 66/429 (15%)

Query: 3   ALRQPQVAE--LLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELM 60
           A R+ QVAE   L + +  F  +FG+ P+  V APGRVN+IGEH DY    VLPMA+E  
Sbjct: 7   ATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQD 66

Query: 61  TVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANY----VKGVIQY 116
            ++   P K   + L  T+     P    F        ++   P W NY    +KG+ ++
Sbjct: 67  VLIAVEPVKTYALQLANTN-----PLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEH 121

Query: 117 YPAAPLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHS 176
           +  + L G + +V  ++P   GLSSS++L          +   + +    A++C ++E  
Sbjct: 122 FGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER- 180

Query: 177 FAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLASSEY 236
           + G   G MDQ IS + ++G A LI+   L  + V L    + V+  +    +  A+S +
Sbjct: 181 YIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHF 240

Query: 237 PVRRRQCEEVARALGKES---------LREVQ---------------------------- 259
            +R  +C   A+ L K           L EVQ                            
Sbjct: 241 NIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEI 300

Query: 260 -------LEELEA------ARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGD---YRAF 303
                  LEEL         +D++  + ++RA+HV  E  R  Q             +  
Sbjct: 301 CRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLL 360

Query: 304 GRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASAAPH 363
           G LM +SH S RD YE SCPELDQLV+      G  GSR+TG G+GGCTV+++ A   P 
Sbjct: 361 GELMNQSHMSCRDMYECSCPELDQLVDICRKF-GAQGSRLTGAGWGGCTVSMVPADKLPS 419

Query: 364 AMRHIQEHY 372
            + ++ + Y
Sbjct: 420 FLANVHKAY 428


>gi|48527957 galactokinase 2 isoform 2 [Homo sapiens]
          Length = 447

 Score =  157 bits (397), Expect = 2e-38
 Identities = 122/423 (28%), Positives = 190/423 (44%), Gaps = 64/423 (15%)

Query: 7   PQVAELLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGS 66
           P + + L + +  F  +FG+ P+  V APGRVN+IGEH DY    VLPMA+E   ++   
Sbjct: 2   PVLYDRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVE 61

Query: 67  PRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANY----VKGVIQYYPAAPL 122
           P K   + L  T+     P    F        ++   P W NY    +KG+ +++  + L
Sbjct: 62  PVKTYALQLANTN-----PLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNL 116

Query: 123 PGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGMPC 182
            G + +V  ++P   GLSSS++L          +   + +    A++C ++E  + G   
Sbjct: 117 TGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER-YIGTEG 175

Query: 183 GIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLASSEYPVRRRQ 242
           G MDQ IS + ++G A LI+   L  + V L    + V+  +    +  A+S + +R  +
Sbjct: 176 GGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVME 235

Query: 243 CEEVARALGKES---------LREVQ---------------------------------- 259
           C   A+ L K           L EVQ                                  
Sbjct: 236 CRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGI 295

Query: 260 -LEELEA------ARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGD---YRAFGRLMVE 309
            LEEL         +D++  + ++RA+HV  E  R  Q             +  G LM +
Sbjct: 296 SLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQ 355

Query: 310 SHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASAAPHAMRHIQ 369
           SH S RD YE SCPELDQLV+      G  GSR+TG G+GGCTV+++ A   P  + ++ 
Sbjct: 356 SHMSCRDMYECSCPELDQLVDICRKF-GAQGSRLTGAGWGGCTVSMVPADKLPSFLANVH 414

Query: 370 EHY 372
           + Y
Sbjct: 415 KAY 417


>gi|167001643 mevalonate kinase [Homo sapiens]
          Length = 396

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 96/374 (25%), Positives = 140/374 (37%), Gaps = 80/374 (21%)

Query: 30  LAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEG---ADEPQ 86
           L VSAPG+V L GEH   +  + L ++L L T L   P  +G V L   + G   A +  
Sbjct: 6   LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVA 65

Query: 87  RLQFPLPTA---QRSLEPGTPRWANYVKGV------------------IQYY-----PAA 120
           RLQ  L T+   Q  +   T      +K V                  +  Y        
Sbjct: 66  RLQ-SLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQR 124

Query: 121 PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPD------SGTIAAR-------- 166
            LP    VV S +P G GL SSA+  V     L  +C +       G    R        
Sbjct: 125 ALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLEL 184

Query: 167 -AQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNS 225
             +   Q E    G P G+ D  +S  G           SL+ S      P L +L+TN+
Sbjct: 185 INKWAFQGERMIHGNPSGV-DNAVSTWGGALRYHQGKISSLKRS------PALQILLTNT 237

Query: 226 NVRHSLASSEYPVRRR--QCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVG 283
            V  +  +    VR R  +  E+   L    L  +    LE  R             V+G
Sbjct: 238 KVPRNTRALVAGVRNRLLKFPEIVAPL----LTSIDAISLECER-------------VLG 280

Query: 284 EIRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRM 343
           E+         L   +       +++ ++   +   V    LDQL +   A  G++ S++
Sbjct: 281 EMGEAPAPEQYLVLEE-------LIDMNQHHLNALGVGHASLDQLCQVTRA-RGLH-SKL 331

Query: 344 TGGGFGGCTVTLLE 357
           TG G GGC +TLL+
Sbjct: 332 TGAGGGGCGITLLK 345


>gi|4557769 mevalonate kinase [Homo sapiens]
          Length = 396

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 96/374 (25%), Positives = 140/374 (37%), Gaps = 80/374 (21%)

Query: 30  LAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEG---ADEPQ 86
           L VSAPG+V L GEH   +  + L ++L L T L   P  +G V L   + G   A +  
Sbjct: 6   LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVA 65

Query: 87  RLQFPLPTA---QRSLEPGTPRWANYVKGV------------------IQYY-----PAA 120
           RLQ  L T+   Q  +   T      +K V                  +  Y        
Sbjct: 66  RLQ-SLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQR 124

Query: 121 PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPD------SGTIAAR-------- 166
            LP    VV S +P G GL SSA+  V     L  +C +       G    R        
Sbjct: 125 ALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLEL 184

Query: 167 -AQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNS 225
             +   Q E    G P G+ D  +S  G           SL+ S      P L +L+TN+
Sbjct: 185 INKWAFQGERMIHGNPSGV-DNAVSTWGGALRYHQGKISSLKRS------PALQILLTNT 237

Query: 226 NVRHSLASSEYPVRRR--QCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVG 283
            V  +  +    VR R  +  E+   L    L  +    LE  R             V+G
Sbjct: 238 KVPRNTRALVAGVRNRLLKFPEIVAPL----LTSIDAISLECER-------------VLG 280

Query: 284 EIRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRM 343
           E+         L   +       +++ ++   +   V    LDQL +   A  G++ S++
Sbjct: 281 EMGEAPAPEQYLVLEE-------LIDMNQHHLNALGVGHASLDQLCQVTRA-RGLH-SKL 331

Query: 344 TGGGFGGCTVTLLE 357
           TG G GGC +TLL+
Sbjct: 332 TGAGGGGCGITLLK 345


>gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Homo
           sapiens]
          Length = 1632

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 214 SDPKLAVLITNSNVRHSLASSEY---PVRRRQCEEVARALGKESLREVQLEELEAARDLV 270
           ++P  +  IT  + R +  +S +   P +R+  EE  RA   ES++E   ++ E  R + 
Sbjct: 165 AEPSPSPRITRKSTRQTTITSHFAKGPAKRKPQEESERAKSDESIKEEDKDQDEKRRRVT 224

Query: 271 SKEGFRRARHVVGEIRRTAQAAAALRRGDYR 301
           S+E  R AR +  E    A++     + + R
Sbjct: 225 SRE--RVARPLPAEEPERAKSGTRTEKEEER 253


>gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo
           sapiens]
          Length = 1616

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 215 DPKLAVLITNSNVRHSLASSEY---PVRRRQCEEVARALGKESLREVQLEELEAARDLVS 271
           +P  +  IT  + R +  +S +   P +R+  EE  RA   ES++E   ++ E  R + S
Sbjct: 150 EPSPSPRITRKSTRQTTITSHFAKGPAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTS 209

Query: 272 KEGFRRARHVVGEIRRTAQAAAALRRGDYR 301
           +E  R AR +  E    A++     + + R
Sbjct: 210 RE--RVARPLPAEEPERAKSGTRTEKEEER 237


>gi|11863156 RECK protein precursor [Homo sapiens]
          Length = 971

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 8/51 (15%)

Query: 160 SGTIAARAQVCQQAEHS-------FAGMPCGIMDQFISLMGQKGHALLIDC 203
           +G +    ++C  +EHS       F G+PC   DQF+ + GQ G      C
Sbjct: 605 AGNLVCSTRLCL-SEHSSEDDRRTFTGLPCNCADQFVPVCGQNGRTYPSAC 654


>gi|13775238 plasmalemma vesicle associated protein [Homo sapiens]
          Length = 442

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 18/139 (12%)

Query: 201 IDCRSL-ETSLVPLSDPKLAVLITNSNVRHSLASSEYPVRRR----------QCEEVARA 249
           +D R+L   S++P S   L       N+ H L S    +RR           + EE+AR+
Sbjct: 235 MDLRNLWRDSIIPRSLDNLGY-----NLYHPLGSELASIRRACDHMPSLMSSKVEELARS 289

Query: 250 LGKESLREVQLEELEAARD-LVSKEGFRRARHVVGEIRRTAQAAAALRRGDYRAFGRLMV 308
           L +  +  V  E  +  R  L +++G R ++    ++ + AQA  A  + +     +L +
Sbjct: 290 L-RADIERVARENSDLQRQKLEAQQGLRASQEAKQKVEKEAQAREAKLQAECSRQTQLAL 348

Query: 309 ESHRSLRDDYEVSCPELDQ 327
           E    LR + +    EL++
Sbjct: 349 EEKAVLRKERDNLAKELEE 367


>gi|239755742 PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box
           polypeptide 11 (CHL1-like helicase homolog, S.
           cerevisiae) [Homo sapiens]
          Length = 282

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 14/137 (10%)

Query: 136 GGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGMPCGIMDQFISLMGQK 195
           GGG S S S           +CPDS  +A    +    +     + CG +        +K
Sbjct: 4   GGGCSGSLSQRGPASFKFSGVCPDSRGLAFSVAILPAKKGKSLSLICGALSWLRDFEQKK 63

Query: 196 GHALLIDCRSLETSLVPLSDPKLAVLITNSNVRHSLASSEYP----------VRRRQCEE 245
                 + R LET   PL D K   L  +S+     A +  P          V++++  +
Sbjct: 64  REE---EARLLETGTGPLHDEKDESLCLSSSC-EGAAGTPRPAGEPAWVTQFVQKKEERD 119

Query: 246 VARALGKESLREVQLEE 262
           +   L  E  R  Q EE
Sbjct: 120 LVNRLKVEQARRKQREE 136


>gi|8051593 GA binding protein transcription factor, beta subunit 1
           isoform beta 1 [Homo sapiens]
          Length = 395

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 17/127 (13%)

Query: 183 GIMDQFISLMGQKGHALLID------CRSLETS------LVPLSDPKLAVLITNSNVRHS 230
           G + Q +S  GQ+   ++ D        S+ TS      +V + D +  + +  +++   
Sbjct: 259 GAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVTMPDGQQVLTVPATDIAEE 318

Query: 231 LASSEYPVRRRQCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQ 290
              SE P  +RQC E+     +  +   ++EE EA +  +  E  R A+    ++ +  Q
Sbjct: 319 TVISEEPPAKRQCIEII----ENRVESAEIEEREALQKQLD-EANREAQKYRQQLLKKEQ 373

Query: 291 AAAALRR 297
            A A R+
Sbjct: 374 EAEAYRQ 380


>gi|8051595 GA binding protein transcription factor, beta subunit 1
           isoform beta 2 [Homo sapiens]
          Length = 383

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 17/127 (13%)

Query: 183 GIMDQFISLMGQKGHALLID------CRSLETS------LVPLSDPKLAVLITNSNVRHS 230
           G + Q +S  GQ+   ++ D        S+ TS      +V + D +  + +  +++   
Sbjct: 247 GAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVTMPDGQQVLTVPATDIAEE 306

Query: 231 LASSEYPVRRRQCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQ 290
              SE P  +RQC E+     +  +   ++EE EA +  +  E  R A+    ++ +  Q
Sbjct: 307 TVISEEPPAKRQCIEII----ENRVESAEIEEREALQKQLD-EANREAQKYRQQLLKKEQ 361

Query: 291 AAAALRR 297
            A A R+
Sbjct: 362 EAEAYRQ 368


>gi|7662180 glycine-, glutamate-,
           thienylcyclohexylpiperidine-binding protein [Homo
           sapiens]
          Length = 925

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 24/84 (28%)

Query: 84  EPQRLQFPLPTAQRSLEPGTPRWANYVKG------------VIQYYPAAPLPGFSAVVVS 131
           +P++L    P    +  PG   W  ++ G            ++Q  PA   PG S+ V +
Sbjct: 837 KPEKLANRCPLCHENFSPGEEAWKAHLMGPAGCTMNLRKTHILQKAPALQ-PGKSSAVAA 895

Query: 132 SVPLG-----------GGLSSSAS 144
           S PLG           GGLS S+S
Sbjct: 896 SGPLGSKAGSKIPTPKGGLSKSSS 919


>gi|92859701 myosin VI [Homo sapiens]
          Length = 1285

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 12/131 (9%)

Query: 204 RSLETSLVPLSDPKLAVLITNSNVRHSLASSEYPVRRRQCEEVARALGKESLREVQLEEL 263
           ++LE S+  L     + ++T   ++      EY    +  EE+  AL K+  +E + E L
Sbjct: 872 KNLEISIDTLMAKIKSTMMTQEQIQ-----KEYDALVKSSEELLSALQKKKQQEEEAERL 926

Query: 264 EAARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDYEVSCP 323
              ++ + KE   R R    E RR  +      + +  A  R   E  R  R+D E    
Sbjct: 927 RRIQEEMEKE---RKRREEDEKRRRKEEEERRMKLEMEA-KRKQEEEERKKREDDE---K 979

Query: 324 ELDQLVEAALA 334
            +   VEA LA
Sbjct: 980 RIQAEVEAQLA 990


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,371,950
Number of Sequences: 37866
Number of extensions: 642919
Number of successful extensions: 1847
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1831
Number of HSP's gapped (non-prelim): 20
length of query: 392
length of database: 18,247,518
effective HSP length: 104
effective length of query: 288
effective length of database: 14,309,454
effective search space: 4121122752
effective search space used: 4121122752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.