CALCA 28370

Name: CALCA	Sequence: fasta or formatted (141aa)		NCBI GI: 4502545
Description: calcitonin isoform CALCA preproprotein		Referenced in: Pancreas and Insulin Peptide and Protein G-coupled Signals Thyroid and Thyroid Hormone Receptor
Other entries for this name: alt prot [128aa] calcitonin isoform CGRP preproprotein alt mRNA [141aa] calcitonin isoform CALCA preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 14 2 C cysteine 1.4 2 1 D aspartate 5.7 8 1 E glutamate 6.4 9 1 F phenylalanine 5.0 7 1 G glycine 5.7 8 1 H histidine 2.8 4 1 I isoleucine 1.4 2 1 K lysine 4.3 6 2 L leucine 12.1 17 3 M methionine 3.5 5 1 N asparagine 2.8 4 1 P proline 6.4 9 1 Q glutamine 6.4 9 1 R arginine 5.7 8 1 S serine 11.3 16 2 T threonine 4.3 6 1 V valine 3.5 5 1 W tryptophan 0.0 0 0 Y tyrosine 1.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcitonin isoform CALCA preproprotein CALCA 1.000 calcitonin isoform CALCA preproprotein CALCA 0.477 calcitonin isoform CGRP preproprotein CALCB 0.406 calcitonin-related polypeptide, beta AHNAK2 0.023 AHNAK nucleoprotein 2 KIAA0415 0.012 hypothetical protein LOC9907 LOC100292075 0.012 PREDICTED: hypothetical protein XP_002344878 LOC100290996 0.012 PREDICTED: hypothetical protein XP_002347569 LOC100289090 0.012 PREDICTED: hypothetical protein XP_002343380 WASF3 0.012 WAS protein family, member 3 MAP3K14 0.008 mitogen-activated protein kinase kinase kinase 14 [... GGNBP2 0.008 zinc finger protein 403 AXIN2 0.008 axin 2 CRMP1 0.008 collapsin response mediator protein 1 isoform 1 [Hom... PHLDB2 0.008 pleckstrin homology-like domain, family B, member 2... PHLDB2 0.008 pleckstrin homology-like domain, family B, member 2... PHLDB2 0.008 pleckstrin homology-like domain, family B, member 2... PHLDB2 0.008 pleckstrin homology-like domain, family B, member 2 ... LOC100293409 0.004 PREDICTED: similar to Mucin-19 LOC100291118 0.004 PREDICTED: hypothetical protein XP_002347351 LOC100287737 0.004 PREDICTED: hypothetical protein XP_002343203 IARS 0.004 isoleucine tRNA synthetase IARS 0.004 isoleucine tRNA synthetase MAP3K6 0.004 mitogen-activated protein kinase kinase kinase 6 [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.