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Search of human proteins with 4502419
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502419 biliverdin reductase B (flavin reductase (NADPH))
[Homo sapiens]
(206 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502419 biliverdin reductase B (flavin reductase (NADPH)) [Ho... 414 e-116
gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s... 32 0.50
gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... 32 0.50
gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... 32 0.50
gi|56118217 UDP-galactose-4-epimerase [Homo sapiens] 31 0.85
gi|56237023 UDP-galactose-4-epimerase [Homo sapiens] 31 0.85
gi|189083684 UDP-galactose-4-epimerase [Homo sapiens] 31 0.85
gi|148728170 HIV-1 Tat interactive protein 2, 30kDa isoform c [H... 31 0.85
gi|148728172 HIV-1 Tat interactive protein 2, 30kDa isoform b [H... 31 0.85
gi|148728168 HIV-1 Tat interactive protein 2, 30kDa isoform b [H... 31 0.85
gi|148728166 HIV-1 Tat interactive protein 2, 30kDa isoform a [H... 31 0.85
gi|148728164 HIV-1 Tat interactive protein 2, 30kDa isoform b [H... 31 0.85
gi|149944560 forkhead box D4-like 2 [Homo sapiens] 28 7.2
gi|146262007 forkhead box D4-like 6 [Homo sapiens] 28 7.2
gi|76880472 forkhead box D4-like 4 [Homo sapiens] 28 7.2
gi|157042770 forkhead box D4-like 3 [Homo sapiens] 27 9.4
gi|59710104 plexin A3 [Homo sapiens] 27 9.4
gi|187423902 forkhead box D4-like 5 [Homo sapiens] 27 9.4
gi|16933557 dachsous 1 precursor [Homo sapiens] 27 9.4
>gi|4502419 biliverdin reductase B (flavin reductase (NADPH)) [Homo
sapiens]
Length = 206
Score = 414 bits (1063), Expect = e-116
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD 60
MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD
Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD 60
Query: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120
VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK
Sbjct: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120
Query: 121 VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHD 180
VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHD
Sbjct: 121 VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHD 180
Query: 181 LGHFMLRCLTTDEYDGHSTYPSHQYQ 206
LGHFMLRCLTTDEYDGHSTYPSHQYQ
Sbjct: 181 LGHFMLRCLTTDEYDGHSTYPSHQYQ 206
>gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform a [Homo sapiens]
Length = 369
Score = 31.6 bits (70), Expect = 0.50
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 44 GPRPAHVVVGDVLQAADVDKTVAGQDAVI---VLLGTRNDLSPTTVMS---EGARNIVAA 97
GP + GDV QA +V VAG VI L+ SP T+ +G RN++ A
Sbjct: 56 GPVRVTAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEA 115
Query: 98 MKAHGVDKVVACTSAFLLWDPTKVPP 123
G +V +S ++ TK P
Sbjct: 116 CVQTGTRFLVYTSSMEVVGPNTKGHP 141
>gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
Length = 196
Score = 31.6 bits (70), Expect = 0.50
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 44 GPRPAHVVVGDVLQAADVDKTVAGQDAVI---VLLGTRNDLSPTTVMS---EGARNIVAA 97
GP + GDV QA +V VAG VI L+ SP T+ +G RN++ A
Sbjct: 56 GPVRVTAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEA 115
Query: 98 MKAHGVDKVVACTSAFLLWDPTKVPP 123
G +V +S ++ TK P
Sbjct: 116 CVQTGTRFLVYTSSMEVVGPNTKGHP 141
>gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
Length = 196
Score = 31.6 bits (70), Expect = 0.50
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 44 GPRPAHVVVGDVLQAADVDKTVAGQDAVI---VLLGTRNDLSPTTVMS---EGARNIVAA 97
GP + GDV QA +V VAG VI L+ SP T+ +G RN++ A
Sbjct: 56 GPVRVTAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEA 115
Query: 98 MKAHGVDKVVACTSAFLLWDPTKVPP 123
G +V +S ++ TK P
Sbjct: 116 CVQTGTRFLVYTSSMEVVGPNTKGHP 141
>gi|56118217 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 30.8 bits (68), Expect = 0.85
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVL------VRDSSRLPSEGPRPAHVVVGDVLQ 57
+K+ + G G G T+ + ++AGY V+ R LP E R + G ++
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLP-ESLRRVQELTGRSVE 61
Query: 58 AADVDKTVAGQ----------DAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKA 100
++D G AVI G + L V G ++ MKA
Sbjct: 62 FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 101 HGVDKVVACTSAFLLWDPTKVP 122
HGV +V +SA + +P +P
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLP 143
>gi|56237023 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 30.8 bits (68), Expect = 0.85
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVL------VRDSSRLPSEGPRPAHVVVGDVLQ 57
+K+ + G G G T+ + ++AGY V+ R LP E R + G ++
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLP-ESLRRVQELTGRSVE 61
Query: 58 AADVDKTVAGQ----------DAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKA 100
++D G AVI G + L V G ++ MKA
Sbjct: 62 FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 101 HGVDKVVACTSAFLLWDPTKVP 122
HGV +V +SA + +P +P
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLP 143
>gi|189083684 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 30.8 bits (68), Expect = 0.85
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVL------VRDSSRLPSEGPRPAHVVVGDVLQ 57
+K+ + G G G T+ + ++AGY V+ R LP E R + G ++
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLP-ESLRRVQELTGRSVE 61
Query: 58 AADVDKTVAGQ----------DAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKA 100
++D G AVI G + L V G ++ MKA
Sbjct: 62 FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 101 HGVDKVVACTSAFLLWDPTKVP 122
HGV +V +SA + +P +P
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLP 143
>gi|148728170 HIV-1 Tat interactive protein 2, 30kDa isoform c
[Homo sapiens]
Length = 133
Score = 30.8 bits (68), Expect = 0.85
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58
M K + I GA+G+TG L + ++ G +VT++ R E + + V D +
Sbjct: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL 75
Query: 59 ADVDKTVAGQDAVIVLLGT 77
D G D LGT
Sbjct: 76 DDYASAFQGHDVGFCCLGT 94
>gi|148728172 HIV-1 Tat interactive protein 2, 30kDa isoform b
[Homo sapiens]
Length = 242
Score = 30.8 bits (68), Expect = 0.85
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58
M K + I GA+G+TG L + ++ G +VT++ R E + + V D +
Sbjct: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL 75
Query: 59 ADVDKTVAGQDAVIVLLGT 77
D G D LGT
Sbjct: 76 DDYASAFQGHDVGFCCLGT 94
>gi|148728168 HIV-1 Tat interactive protein 2, 30kDa isoform b
[Homo sapiens]
Length = 242
Score = 30.8 bits (68), Expect = 0.85
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58
M K + I GA+G+TG L + ++ G +VT++ R E + + V D +
Sbjct: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL 75
Query: 59 ADVDKTVAGQDAVIVLLGT 77
D G D LGT
Sbjct: 76 DDYASAFQGHDVGFCCLGT 94
>gi|148728166 HIV-1 Tat interactive protein 2, 30kDa isoform a [Homo
sapiens]
Length = 276
Score = 30.8 bits (68), Expect = 0.85
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58
M K + I GA+G+TG L + ++ G +VT++ R E + + V D +
Sbjct: 50 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL 109
Query: 59 ADVDKTVAGQDAVIVLLGT 77
D G D LGT
Sbjct: 110 DDYASAFQGHDVGFCCLGT 128
>gi|148728164 HIV-1 Tat interactive protein 2, 30kDa isoform b
[Homo sapiens]
Length = 242
Score = 30.8 bits (68), Expect = 0.85
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58
M K + I GA+G+TG L + ++ G +VT++ R E + + V D +
Sbjct: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL 75
Query: 59 ADVDKTVAGQDAVIVLLGT 77
D G D LGT
Sbjct: 76 DDYASAFQGHDVGFCCLGT 94
>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
Length = 416
Score = 27.7 bits (60), Expect = 7.2
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 146 YVAVMPPHIGD--------QPLTGAYTVTLDGRGPSRVISKHDLGHFML 186
+ A+ PH G QP+ GAY T GR P ++ H L + +L
Sbjct: 225 HAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLL 273
>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
Length = 417
Score = 27.7 bits (60), Expect = 7.2
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 146 YVAVMPPHIGD--------QPLTGAYTVTLDGRGPSRVISKHDLGHFML 186
+ A+ PH G QP+ GAY T GR P ++ H L + +L
Sbjct: 225 HAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLL 273
>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
Length = 416
Score = 27.7 bits (60), Expect = 7.2
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 146 YVAVMPPHIGD--------QPLTGAYTVTLDGRGPSRVISKHDLGHFML 186
+ A+ PH G QP+ GAY T GR P ++ H L + +L
Sbjct: 225 HAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLL 273
>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
Length = 417
Score = 27.3 bits (59), Expect = 9.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 157 QPLTGAYTVTLDGRGPSRVISKHDLGHFML 186
QP+ GAY T GR P ++ H L + +L
Sbjct: 244 QPVPGAYPNTAPGRRPYALLHPHPLRYLLL 273
>gi|59710104 plexin A3 [Homo sapiens]
Length = 1871
Score = 27.3 bits (59), Expect = 9.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 11 ATGQTGLTTLAQAVQAGYEVTVLVRDS 37
A+G T LT ++ AG VTV VRDS
Sbjct: 947 ASGGTRLTISGSSLDAGSRVTVTVRDS 973
>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
Length = 416
Score = 27.3 bits (59), Expect = 9.4
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 146 YVAVMPPHIGD--------QPLTGAYTVTLDGRGPSRVISKHDLGHFML 186
+ A+ PH G QP+ GAY T GR P ++ H L + +L
Sbjct: 225 HAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRCPYALLHPHPLRYLLL 273
>gi|16933557 dachsous 1 precursor [Homo sapiens]
Length = 3298
Score = 27.3 bits (59), Expect = 9.4
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 24/89 (26%)
Query: 4 KKIAIFGATGQ-TGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVD 62
K I TG+ T L TL + Q+ Y++ V V+D P HV V D+
Sbjct: 1152 KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDL------- 1204
Query: 63 KTVAGQDAVIVLLGTRNDLSPTTVMSEGA 91
ND SPT + + GA
Sbjct: 1205 ----------------NDNSPTFLQASGA 1217
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,705,821
Number of Sequences: 37866
Number of extensions: 315727
Number of successful extensions: 748
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 740
Number of HSP's gapped (non-prelim): 21
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.