Search of human proteins with 44662832

Search of human proteins with 44662832

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|44662832 S-phase 2 protein isoform 2 [Homo sapiens]
         (279 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|44662832 S-phase 2 protein isoform 2 [Homo sapiens]                576   e-165
gi|44662828 S-phase 2 protein isoform 4 [Homo sapiens]                503   e-143
gi|44662830 S-phase 2 protein isoform 1 [Homo sapiens]                503   e-143
gi|44662826 S-phase 2 protein isoform 3 [Homo sapiens]                503   e-143
gi|24308527 stereocilin [Homo sapiens]                                 31   1.4  
gi|148612838 hypothetical protein LOC158358 [Homo sapiens]             31   1.4  
gi|38372919 basigin isoform 1 precursor [Homo sapiens]                 30   2.3  
gi|38372923 basigin isoform 4 [Homo sapiens]                           30   2.3  
gi|38372925 basigin isoform 2 precursor [Homo sapiens]                 30   2.3  
gi|212549782 caspase 8 associated protein 2 [Homo sapiens]             30   2.3  
gi|6912288 caspase 8 associated protein 2 [Homo sapiens]               30   2.3  
gi|212549532 caspase 8 associated protein 2 [Homo sapiens]             30   2.3  
gi|222144293 karyopherin alpha 1 [Homo sapiens]                        30   3.1  
gi|42518068 trans-golgi network protein 2 [Homo sapiens]               30   3.1  
gi|239753690 PREDICTED: hypothetical protein XP_002345753 [Homo ...    29   5.2  
gi|23238208 interleukin 17A receptor precursor [Homo sapiens]          28   8.9  

>gi|44662832 S-phase 2 protein isoform 2 [Homo sapiens]
          Length = 279

 Score =  576 bits (1484), Expect = e-165
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60
           MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG
Sbjct: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60

Query: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120
           CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT
Sbjct: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120

Query: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180
           IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL
Sbjct: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180

Query: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240
           SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD
Sbjct: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240

Query: 241 PHIPPVSKNAKARTRKCSLVSGHGRENKSCRGWGWGQGF 279
           PHIPPVSKNAKARTRKCSLVSGHGRENKSCRGWGWGQGF
Sbjct: 241 PHIPPVSKNAKARTRKCSLVSGHGRENKSCRGWGWGQGF 279


>gi|44662828 S-phase 2 protein isoform 4 [Homo sapiens]
          Length = 316

 Score =  503 bits (1295), Expect = e-143
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60
           MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG
Sbjct: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60

Query: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120
           CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT
Sbjct: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120

Query: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180
           IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL
Sbjct: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180

Query: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240
           SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD
Sbjct: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240

Query: 241 PHIPPV 246
           PHIPPV
Sbjct: 241 PHIPPV 246


>gi|44662830 S-phase 2 protein isoform 1 [Homo sapiens]
          Length = 316

 Score =  503 bits (1295), Expect = e-143
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60
           MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG
Sbjct: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60

Query: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120
           CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT
Sbjct: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120

Query: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180
           IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL
Sbjct: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180

Query: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240
           SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD
Sbjct: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240

Query: 241 PHIPPV 246
           PHIPPV
Sbjct: 241 PHIPPV 246


>gi|44662826 S-phase 2 protein isoform 3 [Homo sapiens]
          Length = 316

 Score =  503 bits (1295), Expect = e-143
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60
           MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG
Sbjct: 1   MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 60

Query: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120
           CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT
Sbjct: 61  CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 120

Query: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180
           IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL
Sbjct: 121 IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGAL 180

Query: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240
           SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD
Sbjct: 181 SSLAQTEVTLGGTMGQASAHILCRRPRQRPTDQTQWFSILPDFSLDLQEGPSVESQPYSD 240

Query: 241 PHIPPV 246
           PHIPPV
Sbjct: 241 PHIPPV 246


>gi|24308527 stereocilin [Homo sapiens]
          Length = 1775

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 46/176 (26%), Positives = 60/176 (34%), Gaps = 30/176 (17%)

Query: 27  LVLLRDSVEWEGRSLLKALVKKSALCGEQVHILGCEVSEEEFREGFDSDINNRLVYHDFF 86
           LV LR S +WE             L G+ + +LG E +  +F           LV+    
Sbjct: 97  LVTLRGSPDWE---------PMLGLLGDMLALLGQEQTPRDF-----------LVHQAGV 136

Query: 87  RDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVTIALDSLSWLLLRLPCT---TLCQVLH 143
              L         PGGP    R  C R  P    +A D L  LLL L  T    L QV  
Sbjct: 137 LGGLVEVLLGALVPGGPPTPTRPPCTRDGPSDCVLAADWLPSLLLLLEGTRWQALVQVQP 196

Query: 144 AVSHQDSCPGDSSSVGKVSVLGLLHEELHGPGPVGALSSLAQTEVTLGGTMGQASA 199
           +V   ++   D        + GLL       G +     L   E   GG +    A
Sbjct: 197 SVDPTNATGLDGREAAPHFLQGLL-------GLLTPTGELGSKEALWGGLLRTVGA 245


>gi|148612838 hypothetical protein LOC158358 [Homo sapiens]
          Length = 2103

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 13/78 (16%)

Query: 117  VPVTIALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELHGPG- 175
            +PVT+AL +        P TT  ++++ V H  + PG + SV           + H PG 
Sbjct: 1742 IPVTVALPT--------PATTSPKIINTVPHSAAVPGATRSVSISKRQSRTSLQFHSPGI 1793

Query: 176  ----PVGALSSLAQTEVT 189
                P    ++  QTE++
Sbjct: 1794 STTVPTNVNTNKPQTELS 1811


>gi|38372919 basigin isoform 1 precursor [Homo sapiens]
          Length = 385

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 153 GDSSSVGKVSVLGLLHEELHGPGPVGALSSLAQTEVTLGGTMGQASAHILCRRPRQRPTD 212
           G+ S V     +G  + +LHGP  V A+ S     +  G T     A ++C+     P  
Sbjct: 199 GEYSCVFLPEPMGTANIQLHGPPRVKAVKS--SEHINEGET-----AMLVCKSESVPPVT 251

Query: 213 QTQWFSILPDFSLDLQEGPS-----VESQPYSDPHIPPVSKNAKARTRKCSLVSGHGRE 266
              W+ I       L  G         SQ  S+ HI  ++  A     +C+  S  G +
Sbjct: 252 DWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSD 310


>gi|38372923 basigin isoform 4 [Homo sapiens]
          Length = 205

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 153 GDSSSVGKVSVLGLLHEELHGPGPVGALSSLAQTEVTLGGTMGQASAHILCRRPRQRPTD 212
           G+ S V     +G  + +LHGP  V A+ S     +  G T     A ++C+     P  
Sbjct: 19  GEYSCVFLPEPMGTANIQLHGPPRVKAVKS--SEHINEGET-----AMLVCKSESVPPVT 71

Query: 213 QTQWFSILPDFSLDLQEGPS-----VESQPYSDPHIPPVSKNAKARTRKCSLVSGHGRE 266
              W+ I       L  G         SQ  S+ HI  ++  A     +C+  S  G +
Sbjct: 72  DWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSD 130


>gi|38372925 basigin isoform 2 precursor [Homo sapiens]
          Length = 269

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 153 GDSSSVGKVSVLGLLHEELHGPGPVGALSSLAQTEVTLGGTMGQASAHILCRRPRQRPTD 212
           G+ S V     +G  + +LHGP  V A+ S     +  G T     A ++C+     P  
Sbjct: 83  GEYSCVFLPEPMGTANIQLHGPPRVKAVKS--SEHINEGET-----AMLVCKSESVPPVT 135

Query: 213 QTQWFSILPDFSLDLQEGPS-----VESQPYSDPHIPPVSKNAKARTRKCSLVSGHGRE 266
              W+ I       L  G         SQ  S+ HI  ++  A     +C+  S  G +
Sbjct: 136 DWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSD 194


>gi|212549782 caspase 8 associated protein 2 [Homo sapiens]
          Length = 1982

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 33   SVEWEGRSLLKALVKKSALCGEQVHILGCEVSEEEFREGFDSDINNRLVYHD 84
            SV+   R LLK  + KS        ++GC+ SEE +++  +S IN   V HD
Sbjct: 1183 SVDNSNRELLKEKLSKSEDPVHYKSLVGCKKSEENYQDQNNSSINT--VKHD 1232


>gi|6912288 caspase 8 associated protein 2 [Homo sapiens]
          Length = 1982

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 33   SVEWEGRSLLKALVKKSALCGEQVHILGCEVSEEEFREGFDSDINNRLVYHD 84
            SV+   R LLK  + KS        ++GC+ SEE +++  +S IN   V HD
Sbjct: 1183 SVDNSNRELLKEKLSKSEDPVHYKSLVGCKKSEENYQDQNNSSINT--VKHD 1232


>gi|212549532 caspase 8 associated protein 2 [Homo sapiens]
          Length = 1982

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 33   SVEWEGRSLLKALVKKSALCGEQVHILGCEVSEEEFREGFDSDINNRLVYHD 84
            SV+   R LLK  + KS        ++GC+ SEE +++  +S IN   V HD
Sbjct: 1183 SVDNSNRELLKEKLSKSEDPVHYKSLVGCKKSEENYQDQNNSSINT--VKHD 1232


>gi|222144293 karyopherin alpha 1 [Homo sapiens]
          Length = 538

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 27/171 (15%)

Query: 106 ALRAMCKRTDPVP----VTIALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGD------S 155
           AL  +C+   P P    V+  L+ LSWLL       L     A+S+    P D       
Sbjct: 235 ALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVID 294

Query: 156 SSVGKVSVLGLLHEELHGPGP-VGALSSLA-----QTEVTLGGTMGQASAHILCRRPRQR 209
           + V +  V  L+H +     P + A+ ++      QT+V L  +  Q+  H+L   P++ 
Sbjct: 295 AGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLL-SSPKES 353

Query: 210 PTDQTQWFSILPDFSLDLQEGPSVESQPYSDPHIPP----VSKNAKARTRK 256
              +  W         ++  G   + Q   D +I P    + + A+ RTRK
Sbjct: 354 IKKEACW------TISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRK 398


>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
          Length = 437

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 18/117 (15%)

Query: 161 VSVLGLLHEELHGPGPVGALSSLAQTEVTLGGTMGQASAH-ILCRRP----RQRPTDQTQ 215
           V  L LL+    G  P+ A  S+ Q E  +  + G  S H  L +RP    +  P  QT 
Sbjct: 4   VVALVLLNVAAAGAVPLLATESVKQEEAGVRPSAGNVSTHPSLSQRPGGSTKSHPEPQTP 63

Query: 216 WFSILPDFSLDLQEGPSVESQPYSDPHIPPVSKNAKARTRKCSLVSGHGRENKSCRG 272
                       ++ PS  S     P   P    A+A+T+K S  +  G E K+ +G
Sbjct: 64  ------------KDSPSKSSAEAQTPEDTPNKSGAEAKTQKDS-SNKSGAEAKTQKG 107


>gi|239753690 PREDICTED: hypothetical protein XP_002345753 [Homo
           sapiens]
          Length = 186

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 7/47 (14%)

Query: 134 PCTTLCQVLHAVSHQDSCPGDSSSVGKVSVLGLLHEELH---GPGPV 177
           PC   C + H+V+  +SC G +S  G + V  +LH +LH    P PV
Sbjct: 52  PC---CPIFHSVALIESCLGTASLAGPLGV-EILHIQLHSYLSPVPV 94


>gi|23238208 interleukin 17A receptor precursor [Homo sapiens]
          Length = 866

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 216 WFSILPDFSLDLQEGPSVESQPYSDPHIPP 245
           WF     +S D Q+ PS++ + + +P +PP
Sbjct: 584 WFECENLYSADDQDAPSLDEEVFEEPLLPP 613


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,640,749
Number of Sequences: 37866
Number of extensions: 604441
Number of successful extensions: 1289
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1281
Number of HSP's gapped (non-prelim): 16
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.