Guide to the Human Genome
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Name: C17orf81 Sequence: fasta or formatted (279aa) NCBI GI: 44662832
Description:

S-phase 2 protein isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [316aa] S-phase 2 protein isoform 3
alt prot [316aa] S-phase 2 protein isoform 4
alt prot [316aa] S-phase 2 protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         16           1
 C cysteine            3.2          9           1
 D aspartate           5.0         14           1
 E glutamate           6.8         19           3
 F phenylalanine       2.9          8           2
 G glycine            10.0         28           2
 H histidine           3.2          9           1
 I isoleucine          2.2          6           1
 K lysine              3.6         10           2
 L leucine            13.3         37           3
 M methionine          1.4          4           1
 N asparagine          1.8          5           2
 P proline             6.5         18           2
 Q glutamine           3.9         11           1
 R arginine            6.5         18           2
 S serine             10.0         28           3
 T threonine           4.7         13           2
 V valine              6.5         18           1
 W tryptophan          2.2          6           1
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   S-phase 2 protein isoform 2 
C17orf81              0.868   S-phase 2 protein isoform 4 
C17orf81              0.868   S-phase 2 protein isoform 1 
C17orf81              0.868   S-phase 2 protein isoform 3 
STRC                  0.011   stereocilin 
KIAA2026              0.011   hypothetical protein LOC158358 
BSG                   0.009   basigin isoform 1 precursor 
BSG                   0.009   basigin isoform 4 
BSG                   0.009   basigin isoform 2 precursor 
CASP8AP2              0.009   caspase 8 associated protein 2 
CASP8AP2              0.009   caspase 8 associated protein 2 
CASP8AP2              0.009   caspase 8 associated protein 2 
KPNA1                 0.009   karyopherin alpha 1 
TGOLN2                0.009   trans-golgi network protein 2 
LOC100291947          0.007   PREDICTED: hypothetical protein XP_002345753 
IL17RA                0.005   interleukin 17A receptor precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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