POLR1C 28033

Name: POLR1C	Sequence: fasta or formatted (346aa)		NCBI GI: 42560246
Description: RNA polymerase I subunit isoform 1		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [342aa] RNA polymerase I subunit isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 26 2 C cysteine 1.2 4 1 D aspartate 7.8 27 2 E glutamate 8.1 28 2 F phenylalanine 4.3 15 1 G glycine 5.2 18 1 H histidine 3.2 11 1 I isoleucine 5.5 19 1 K lysine 4.0 14 2 L leucine 9.0 31 2 M methionine 2.6 9 1 N asparagine 4.0 14 2 P proline 4.9 17 2 Q glutamine 3.5 12 1 R arginine 7.8 27 2 S serine 4.3 15 2 T threonine 4.0 14 2 V valine 10.1 35 2 W tryptophan 0.6 2 1 Y tyrosine 2.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA polymerase I subunit isoform 1 POLR1C 0.889 RNA polymerase I subunit isoform 2 POLR2C 0.112 DNA directed RNA polymerase II polypeptide C RANBP6 0.007 RAN binding protein 6 IPO13 0.006 importin 13 AGRN 0.006 agrin SNX29 0.006 sorting nexin 29 ARHGAP11A 0.006 Rho GTPase activating protein 11A isoform 1 ARHGAP11A 0.006 Rho GTPase activating protein 11A isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.