Search of human proteins with 42518076

Search of human proteins with 42518076

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42518076 testis expressed sequence 261 [Homo sapiens]
         (196 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42518076 testis expressed sequence 261 [Homo sapiens]              394   e-110
gi|52317126 olfactory receptor, family 5, subfamily K, member 2 ...    35   0.031
gi|115270955 olfactory receptor, family 5, subfamily K, member 1...    31   0.59 
gi|206597483 solute carrier family 5 (sodium/glucose cotransport...    30   1.0  
gi|116235464 taste receptor, type 2, member 43 [Homo sapiens]          30   1.3  
gi|10835169 solute carrier family 11 (proton-coupled divalent me...    30   1.7  
gi|206597487 solute carrier family 5 (sodium/glucose cotransport...    30   1.7  
gi|116235454 taste receptor, type 2, member 31 [Homo sapiens]          29   2.2  
gi|52317106 olfactory receptor, family 4, subfamily X, member 2 ...    29   2.2  
gi|52317255 olfactory receptor, family 4, subfamily K, member 13...    29   2.2  
gi|146219832 myosin light chain kinase 3 [Homo sapiens]                28   3.8  
gi|50897264 olfactory receptor, family 4, subfamily D, member 1 ...    28   3.8  
gi|31542327 solute carrier family 22, member 16 [Homo sapiens]         28   3.8  
gi|52317243 olfactory receptor, family 4, subfamily D, member 2 ...    28   5.0  
gi|4885295 G protein-coupled receptor 12 [Homo sapiens]                27   8.5  

>gi|42518076 testis expressed sequence 261 [Homo sapiens]
          Length = 196

 Score =  394 bits (1013), Expect = e-110
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MWFMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLY 60
           MWFMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLY
Sbjct: 1   MWFMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLY 60

Query: 61  VFERFPTSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYY 120
           VFERFPTSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYY
Sbjct: 61  VFERFPTSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYY 120

Query: 121 PFSEVLAYFTFCLWIIPFAFFVSLSAGENVLPSTMQPGDDVVSNYFTKGKRGKRLGILVV 180
           PFSEVLAYFTFCLWIIPFAFFVSLSAGENVLPSTMQPGDDVVSNYFTKGKRGKRLGILVV
Sbjct: 121 PFSEVLAYFTFCLWIIPFAFFVSLSAGENVLPSTMQPGDDVVSNYFTKGKRGKRLGILVV 180

Query: 181 FSFIKEAILPSRQKIY 196
           FSFIKEAILPSRQKIY
Sbjct: 181 FSFIKEAILPSRQKIY 196


>gi|52317126 olfactory receptor, family 5, subfamily K, member 2
           [Homo sapiens]
          Length = 316

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 6/128 (4%)

Query: 14  IQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLI----GLYVFERFPTSM 69
           +Q  F+     A  + LA +  +  VA    ++Y I  S  + I    G ++      SM
Sbjct: 99  VQFYFLCTVETADCFLLAAVAYDRYVAICNPLQYHIMMSKKLCIQMTTGAFIAGNLH-SM 157

Query: 70  IGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAE-EYYPFSEVLAY 128
           I VGL   LV+ GL     F   T P + LSC    +N  + F F    + +    VL  
Sbjct: 158 IHVGLVFRLVFCGLNHINHFYCDTLPLYRLSCVDPFINELVLFIFSGSVQVFTIGSVLIS 217

Query: 129 FTFCLWII 136
           + + L  I
Sbjct: 218 YLYILLTI 225


>gi|115270955 olfactory receptor, family 5, subfamily K, member 1
           [Homo sapiens]
          Length = 308

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 14  IQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLI----GLYVFERFPTSM 69
           +Q  F+     A  + LA +  +  VA    ++Y I  S  + I    G ++      SM
Sbjct: 99  VQFYFLCTVETADCFLLAAMAYDRYVAICNPLQYHIMMSKKLCIQMTTGAFIAGNLH-SM 157

Query: 70  IGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAE-EYYPFSEVLAY 128
           I VGL   LV+ G      F     P + LSC    +N  + F F    + +    VL  
Sbjct: 158 IHVGLVFRLVFCGSNHINHFYCDILPLYRLSCVDPYINELVLFIFSGSVQVFTIGSVLIS 217

Query: 129 FTFCLWII 136
           + + L  I
Sbjct: 218 YLYILLTI 225


>gi|206597483 solute carrier family 5 (sodium/glucose
           cotransporter), member 9 isoform 2 [Homo sapiens]
          Length = 681

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 6/112 (5%)

Query: 3   FMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVF 62
           F +  +WL L +   F+ + +AAG+  + + +++      RI  YM    + + + LY+F
Sbjct: 110 FEWNATWLLLALGWVFVPVYIAAGVVTMPQYLKK-RFGGQRIQVYM----SVLSLILYIF 164

Query: 63  ERFPTSMIGVGLFTNLVY-FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQ 113
            +  T +    LF  +   + L  +   +++ +  + ++ GL+ V +  A Q
Sbjct: 165 TKISTDIFSGALFIQMALGWNLYLSTGILLVVTAVYTIAGGLMAVIYTDALQ 216


>gi|116235464 taste receptor, type 2, member 43 [Homo sapiens]
          Length = 309

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 23/110 (20%)

Query: 1   MWFMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLY 60
           +W + LL+W S  +  AF ++ V    Y +  +I  ++           W +T + I   
Sbjct: 59  LWVL-LLNWYSTVLNPAFNSVEVRTTAYNIWAVINHFSN----------WLATTLSIFY- 106

Query: 61  VFERFPTSMIGVGLFTNLVYFGL---LQTFPFIMLTSPNFILSCGLVVVN 107
                   ++ +  F+N ++  L   +++   +ML  P   L+C L V+N
Sbjct: 107 --------LLKIANFSNFIFLHLKRRVKSVILVMLLGPLLFLACHLFVIN 148


>gi|10835169 solute carrier family 11 (proton-coupled divalent metal
           ion transporters), member 2 [Homo sapiens]
          Length = 561

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 22/140 (15%)

Query: 1   MWFMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLY 60
           +W + L + + L +Q     L V  GL +LAE+         R+I   +W    +++ L 
Sbjct: 105 LWILLLATLVGLLLQRLAARLGVVTGL-HLAEVCHRQYPKVPRVI---LW----LMVELA 156

Query: 61  VFERFPTSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYY 120
           +       +IG  +  NL+  G +  +  +++T  +               F F   + Y
Sbjct: 157 IIGSDMQEVIGSAIAINLLSVGRIPLWGGVLITIAD--------------TFVFLFLDKY 202

Query: 121 PFSEVLAYFTFCLWIIPFAF 140
              ++ A+F F + I+   F
Sbjct: 203 GLRKLEAFFGFLITIMALTF 222


>gi|206597487 solute carrier family 5 (sodium/glucose
           cotransporter), member 9 isoform 1 [Homo sapiens]
          Length = 706

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 8   SWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPT 67
           +WL L +   F+ + +AAG+  + + +++      RI  YM    + + + LY+F +  T
Sbjct: 140 TWLLLALGWVFVPVYIAAGVVTMPQYLKK-RFGGQRIQVYM----SVLSLILYIFTKIST 194

Query: 68  SMIGVGLFTNLVY-FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQ 113
            +    LF  +   + L  +   +++ +  + ++ GL+ V +  A Q
Sbjct: 195 DIFSGALFIQMALGWNLYLSTGILLVVTAVYTIAGGLMAVIYTDALQ 241


>gi|116235454 taste receptor, type 2, member 31 [Homo sapiens]
          Length = 309

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 33/115 (28%)

Query: 1   MWFMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIW-----FSTAV 55
           +W + LL+W S     AF ++ V                   R   Y +W     FS  +
Sbjct: 59  LWVL-LLNWYSTVFNPAFYSVEV-------------------RTTAYNVWAVTGHFSNWL 98

Query: 56  LIGLYVFERFPTSMIGVGLFTNLVYFGL---LQTFPFIMLTSPNFILSCGLVVVN 107
              L +F      ++ +  F+NL++  L   +++   +ML  P   L+C L V+N
Sbjct: 99  ATSLSIFY-----LLKIANFSNLIFLHLKRRVKSVILVMLLGPLLFLACQLFVIN 148


>gi|52317106 olfactory receptor, family 4, subfamily X, member 2
           [Homo sapiens]
          Length = 303

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 23/107 (21%)

Query: 6   LLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKY---MIWFSTAVLIGLYVF 62
           ++SW     Q+ F+       ++ L  +  ++ VA  + + Y   M W    VL+G+   
Sbjct: 83  VISWWGCMAQLFFLHFFGGTEIFLLTVMAYDHYVAICKPLSYTTIMNWQVCTVLVGI--- 139

Query: 63  ERFPTSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHY 109
                + +G          G + +F  I+L     +L CG  V+NHY
Sbjct: 140 -----AWVG----------GFMHSFAQILLIF--HLLFCGPNVINHY 169


>gi|52317255 olfactory receptor, family 4, subfamily K, member 13
           [Homo sapiens]
          Length = 304

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 11/102 (10%)

Query: 7   LSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFP 66
           +SW   + Q+ F+ L   + +  L  +  +  VA  + + YM   S  VL GL +     
Sbjct: 92  ISWWGCYSQMFFMHLLGGSEMMLLVAMAIDRYVAICKPLHYMTIMSPRVLTGLLL----- 146

Query: 67  TSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILS--CGLVVV 106
            S   VG   +      + T PF     PN I S  C L +V
Sbjct: 147 -SSYAVGFVHSSSQMAFMLTLPF---CGPNVIDSFFCDLPLV 184


>gi|146219832 myosin light chain kinase 3 [Homo sapiens]
          Length = 819

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 60  YVFERFPTSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILSC 101
           Y F  FPT M  VG+ T ++  GL          + NFI++C
Sbjct: 686 YEFVSFPTDMWSVGVITYMLLSGLSPFLGETDAETMNFIVNC 727


>gi|50897264 olfactory receptor, family 4, subfamily D, member 1
           [Homo sapiens]
          Length = 310

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 7   LSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFP 66
           +S+     Q+ F  L     +++L+ +  +  +A S+ ++Y+   +T + +GL V     
Sbjct: 92  ISYQGCMAQIFFFHLLGGGTVFFLSVMAYDRYIAISQPLRYVTIMNTQLCVGLVV----- 146

Query: 67  TSMIGVGLFTNLVYFGLLQTFPF 89
            + +G G   ++V   L+   PF
Sbjct: 147 AAWVG-GFVHSIVQLALILPLPF 168


>gi|31542327 solute carrier family 22, member 16 [Homo sapiens]
          Length = 577

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 9   WLSLFIQVAF---ITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVF--E 63
           WL++ IQ  F   + L      Y+   L     +  +    ++   + A  +  Y F   
Sbjct: 152 WLAMLIQPLFMFGVLLGSVTFGYFSDRLGRRVVLWATSSSMFLFGIAAAFAVDYYTFMAA 211

Query: 64  RFPTSMIGVGLFTNLVYFGLLQTFPFIMLTSPN---------FILSCGLVVVNHYLAFQF 114
           RF  +M+  G        G +    FI + S           F +   LV +  YL   +
Sbjct: 212 RFFLAMVASGYLV----VGFVYVMEFIGMKSRTWASVHLHSFFAVGTLLVALTGYLVRTW 267

Query: 115 FAEEYYPFSEVLAYFTFCLWIIPFAFFVSLSAG 147
           +  +    S V   F  C W++P   F  LS G
Sbjct: 268 WLYQMI-LSTVTVPFILCCWVLPETPFWLLSEG 299


>gi|52317243 olfactory receptor, family 4, subfamily D, member 2
           [Homo sapiens]
          Length = 307

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 7   LSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFP 66
           +S+     Q+ F      A +++L+ +  +  +A SR ++Y+   +T + +GL V     
Sbjct: 92  ISYQGCMGQIFFFHFLGGAMVFFLSVMAFDRLIAISRPLRYVTVMNTQLWVGLVV----- 146

Query: 67  TSMIGVGLFTNLVYFGLLQTFPF 89
            + +G G   ++V   L+   PF
Sbjct: 147 ATWVG-GFVHSIVQLALMLPLPF 168


>gi|4885295 G protein-coupled receptor 12 [Homo sapiens]
          Length = 334

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)

Query: 69  MIGVGLFTNLVYFGLLQ-------TFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYYP 121
           + G+GL TN V+  LLQ       T   I+ +    + S   + V+ YL+  ++A  Y+ 
Sbjct: 92  LAGIGLITNFVFAYLLQSEATKLVTIGLIVASFSASVCSLLAITVDRYLSL-YYALTYH- 149

Query: 122 FSEVLAYFTFCLWII 136
            SE    FT+ + ++
Sbjct: 150 -SERTVTFTYVMLVM 163


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.333    0.146    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,488,531
Number of Sequences: 37866
Number of extensions: 250594
Number of successful extensions: 635
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 632
Number of HSP's gapped (non-prelim): 16
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.