Guide to the Human Genome
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Search of human proteins with 41872443

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41872443 TRPC4-associated protein isoform b [Homo sapiens]
         (789 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41872443 TRPC4-associated protein isoform b [Homo sapiens]        1561   0.0  
gi|18158416 TRPC4-associated protein isoform a [Homo sapiens]        1553   0.0  
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap...    34   0.46 
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap...    34   0.46 
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap...    34   0.46 
gi|151101151 coiled-coil domain containing 2 isoform b [Homo sap...    33   1.3  
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ...    32   1.8  
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ...    32   1.8  
gi|14211941 gap junction protein, alpha 10 [Homo sapiens]              32   3.0  
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    31   5.1  
gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]     30   8.7  
gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]     30   8.7  
gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]     30   8.7  
gi|153218654 cytochrome P450, family 11, subfamily A, polypeptid...    30   8.7  
gi|153218646 cytochrome P450, family 11, subfamily A, polypeptid...    30   8.7  
gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]     30   8.7  
gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]     30   8.7  
gi|46447823 nuclear factor of activated T-cells, cytoplasmic, ca...    30   8.7  

>gi|41872443 TRPC4-associated protein isoform b [Homo sapiens]
          Length = 789

 Score = 1561 bits (4041), Expect = 0.0
 Identities = 789/789 (100%), Positives = 789/789 (100%)

Query: 1   MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET 60
           MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
Sbjct: 1   MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET 60

Query: 61  FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT 120
           FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
Sbjct: 61  FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT 120

Query: 121 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV 180
           QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
Sbjct: 121 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV 180

Query: 181 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ 240
           TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
Sbjct: 181 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ 240

Query: 241 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER 300
           QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
Sbjct: 241 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER 300

Query: 301 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEENGLPH 360
           LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEENGLPH
Sbjct: 301 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEENGLPH 360

Query: 361 TSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLI 420
           TSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLI
Sbjct: 361 TSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLI 420

Query: 421 WRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAIS 480
           WRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAIS
Sbjct: 421 WRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAIS 480

Query: 481 LKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTS 540
           LKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTS
Sbjct: 481 LKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTS 540

Query: 541 YADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDA 600
           YADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDA
Sbjct: 541 YADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDA 600

Query: 601 KFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSF 660
           KFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSF
Sbjct: 601 KFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSF 660

Query: 661 LFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNN 720
           LFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNN
Sbjct: 661 LFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNN 720

Query: 721 FHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYM 780
           FHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYM
Sbjct: 721 FHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYM 780

Query: 781 DIDRDFTEE 789
           DIDRDFTEE
Sbjct: 781 DIDRDFTEE 789


>gi|18158416 TRPC4-associated protein isoform a [Homo sapiens]
          Length = 797

 Score = 1553 bits (4022), Expect = 0.0
 Identities = 789/797 (98%), Positives = 789/797 (98%), Gaps = 8/797 (1%)

Query: 1   MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET 60
           MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
Sbjct: 1   MAAAPVAAGSGAGRGRRSAATVAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET 60

Query: 61  FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT 120
           FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT
Sbjct: 61  FLTERDKQSKWSGIPQLLLKLHTTSHLHSDFVECQNILKEISPLLSMEAMAFVTEERKLT 120

Query: 121 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV 180
           QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
Sbjct: 121 QETTYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV 180

Query: 181 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ 240
           TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
Sbjct: 181 TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ 240

Query: 241 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER 300
           QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
Sbjct: 241 QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER 300

Query: 301 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQ--------GA 352
           LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQ        GA
Sbjct: 301 LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQASIVFPPPGA 360

Query: 353 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL 412
           SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
Sbjct: 361 SEENGLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL 420

Query: 413 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE 472
           NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
Sbjct: 421 NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE 480

Query: 473 LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE 532
           LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
Sbjct: 481 LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE 540

Query: 533 SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF 592
           SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
Sbjct: 541 SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF 600

Query: 593 NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS 652
           NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
Sbjct: 601 NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS 660

Query: 653 QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK 712
           QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
Sbjct: 661 QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK 720

Query: 713 YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV 772
           YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
Sbjct: 721 YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV 780

Query: 773 SYIEEPYMDIDRDFTEE 789
           SYIEEPYMDIDRDFTEE
Sbjct: 781 SYIEEPYMDIDRDFTEE 797


>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 27/240 (11%)

Query: 239 QQQLANFCRILAV--TISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPG 296
           Q QLA++  ++    T +EM+   +D + L A+N ++ +SL +  +  +  +  + S+  
Sbjct: 147 QGQLADYNMLVDKLNTNTEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEE 206

Query: 297 FVERLCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEEN 356
            +E+  K AT  + ++    + ++ LE   T   N  +L  L  +  +    N    ++ 
Sbjct: 207 EIEQE-KQATDDIIKNMSFENQVKYLEMKTT---NEKLLQELDTLQQQLDSQNM---KKE 259

Query: 357 GLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLF 416
            L    A +Q+ Q   ++HE +Y+LE             R+Q   MIAE K I       
Sbjct: 260 SLEAEIAHSQVKQEAVLLHEKLYELE-----------SHRDQ---MIAEDKSIGSPMEER 305

Query: 417 DKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNEL 476
           +KL+ +    +  +     Q  D    I   I+ +R L    + H+ +     NQ+  EL
Sbjct: 306 EKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLEEHQGEM----NQKYKEL 361


>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 27/240 (11%)

Query: 239 QQQLANFCRILAV--TISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPG 296
           Q QLA++  ++    T +EM+   +D + L A+N ++ +SL +  +  +  +  + S+  
Sbjct: 147 QGQLADYNMLVDKLNTNTEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEE 206

Query: 297 FVERLCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEEN 356
            +E+  K AT  + ++    + ++ LE   T   N  +L  L  +  +    N    ++ 
Sbjct: 207 EIEQE-KQATDDIIKNMSFENQVKYLEMKTT---NEKLLQELDTLQQQLDSQNM---KKE 259

Query: 357 GLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLF 416
            L    A +Q+ Q   ++HE +Y+LE             R+Q   MIAE K I       
Sbjct: 260 SLEAEIAHSQVKQEAVLLHEKLYELE-----------SHRDQ---MIAEDKSIGSPMEER 305

Query: 417 DKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNEL 476
           +KL+ +    +  +     Q  D    I   I+ +R L    + H+ +     NQ+  EL
Sbjct: 306 EKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLEEHQGEM----NQKYKEL 361


>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 27/240 (11%)

Query: 239 QQQLANFCRILAV--TISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPG 296
           Q QLA++  ++    T +EM+   +D + L A+N ++ +SL +  +  +  +  + S+  
Sbjct: 147 QGQLADYNMLVDKLNTNTEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEE 206

Query: 297 FVERLCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEEN 356
            +E+  K AT  + ++    + ++ LE   T   N  +L  L  +  +    N    ++ 
Sbjct: 207 EIEQE-KQATDDIIKNMSFENQVKYLEMKTT---NEKLLQELDTLQQQLDSQNM---KKE 259

Query: 357 GLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLF 416
            L    A +Q+ Q   ++HE +Y+LE             R+Q   MIAE K I       
Sbjct: 260 SLEAEIAHSQVKQEAVLLHEKLYELE-----------SHRDQ---MIAEDKSIGSPMEER 305

Query: 417 DKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNEL 476
           +KL+ +    +  +     Q  D    I   I+ +R L    + H+ +     NQ+  EL
Sbjct: 306 EKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLEEHQGEM----NQKYKEL 361


>gi|151101151 coiled-coil domain containing 2 isoform b [Homo
           sapiens]
          Length = 372

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 23/227 (10%)

Query: 239 QQQLANFCRILAV--TISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPG 296
           Q QLA++  ++    T +EM+   +D + L A+N ++ +SL +  +  +  +  + S+  
Sbjct: 147 QGQLADYNMLVDKLNTNTEMEEVMNDYNMLKAQNDRETQSLDVIFTERQAKEKQIRSVEE 206

Query: 297 FVERLCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEEN 356
            +E+  K AT  + ++    + ++ LE   T   N  +L  L  +  +    N    ++ 
Sbjct: 207 EIEQE-KQATDDIIKNMSFENQVKYLEMKTT---NEKLLQELDTLQQQLDSQNM---KKE 259

Query: 357 GLPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLF 416
            L    A +Q+ Q   ++HE +Y+LE             R+Q   MIAE K I       
Sbjct: 260 SLEAEIAHSQVKQEAVLLHEKLYELE-----------SHRDQ---MIAEDKSIGSPMEER 305

Query: 417 DKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHEN 463
           +KL+ +    +  +     Q  D    I   I+ +R L    + H++
Sbjct: 306 EKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLEEHQD 352


>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
           sapiens]
          Length = 594

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 4/35 (11%)

Query: 9   GSGAGR----GRRSAATVAAWGGWGGRPRPGNILL 39
           G GAGR    GRR       WGG    PRP  +LL
Sbjct: 462 GPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLL 496


>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
           sapiens]
          Length = 594

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 4/35 (11%)

Query: 9   GSGAGR----GRRSAATVAAWGGWGGRPRPGNILL 39
           G GAGR    GRR       WGG    PRP  +LL
Sbjct: 462 GPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLL 496


>gi|14211941 gap junction protein, alpha 10 [Homo sapiens]
          Length = 543

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 729 QQHYLHKDKDSTCLENSSCISFSYWKETVSIL 760
           ++ +LH D  S+   NSSC+ F +W+ + S L
Sbjct: 439 EKRHLHSDSGSSGSRNSSCLDFPHWENSPSPL 470


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
            sapiens]
          Length = 1937

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 250  AVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVERLCKLATRKV 309
            A +++E+    D+   +  K  ++K  L +       N  A+    G +E++C+    +V
Sbjct: 1200 ADSMAELGEQIDNLQRVKQKLEKEKSELKMETDDLSSNAEAISKAKGNLEKMCRSLEDQV 1259

Query: 310  SESTGTASFLQELEEWYTWLDNALVLDALMRVANEESEHNQGASEENGLPHTSARTQLPQ 369
            SE       L+  EE    L N L      R+  E  E+++   E++ L    +R++   
Sbjct: 1260 SE-------LKTKEEEQQRLINDLTAQR-ARLQTEAGEYSRQLDEKDALVSQLSRSKQAS 1311

Query: 370  SMKIMHEIMYKLE 382
            + +I  E+ ++LE
Sbjct: 1312 TQQI-EELKHQLE 1323


>gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]
          Length = 681

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 26  GGWGGRPRPGNILLQLRQGQLTGRGLVRAV 55
           GGW    + G  L  LR GQ+  +GLVRA+
Sbjct: 295 GGWHHHDKDGRPLYVLRLGQMDTKGLVRAL 324


>gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
          Length = 715

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 26  GGWGGRPRPGNILLQLRQGQLTGRGLVRAV 55
           GGW    + G  L  LR GQ+  +GLVRA+
Sbjct: 329 GGWHHHDKDGRPLYVLRLGQMDTKGLVRAL 358


>gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
          Length = 715

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 26  GGWGGRPRPGNILLQLRQGQLTGRGLVRAV 55
           GGW    + G  L  LR GQ+  +GLVRA+
Sbjct: 329 GGWHHHDKDGRPLYVLRLGQMDTKGLVRAL 358


>gi|153218654 cytochrome P450, family 11, subfamily A, polypeptide 1
           isoform b [Homo sapiens]
          Length = 363

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 400 HRMIAEFKLIPGLNNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSD 459
           H  +    L P L  LF    W+ H A+  V+           DI  +  +  L Q  S 
Sbjct: 84  HTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFS-------KADIYTQNFYWELRQKGSV 136

Query: 460 HHENKYLLLNNQELNELSAISLKANIPEVEA 490
           HH+ + +L      +++S   +KAN+ E+ A
Sbjct: 137 HHDYRGILYRLLGDSKMSFEDIKANVTEMLA 167


>gi|153218646 cytochrome P450, family 11, subfamily A, polypeptide 1
           isoform a precursor [Homo sapiens]
          Length = 521

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 400 HRMIAEFKLIPGLNNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSD 459
           H  +    L P L  LF    W+ H A+  V+           DI  +  +  L Q  S 
Sbjct: 242 HTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFS-------KADIYTQNFYWELRQKGSV 294

Query: 460 HHENKYLLLNNQELNELSAISLKANIPEVEA 490
           HH+ + +L      +++S   +KAN+ E+ A
Sbjct: 295 HHDYRGILYRLLGDSKMSFEDIKANVTEMLA 325


>gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]
          Length = 719

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 26  GGWGGRPRPGNILLQLRQGQLTGRGLVRAV 55
           GGW    + G  L  LR GQ+  +GLVRA+
Sbjct: 329 GGWHHHDKDGRPLYVLRLGQMDTKGLVRAL 358


>gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
          Length = 715

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 26  GGWGGRPRPGNILLQLRQGQLTGRGLVRAV 55
           GGW    + G  L  LR GQ+  +GLVRA+
Sbjct: 329 GGWHHHDKDGRPLYVLRLGQMDTKGLVRAL 358


>gi|46447823 nuclear factor of activated T-cells, cytoplasmic,
          calcineurin-dependent 2 interacting protein [Homo
          sapiens]
          Length = 419

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 5/27 (18%)

Query: 7  AAGSGAGRGRRSAATVAAWGGWGGRPR 33
          + GSGAGRG R       WGG G RPR
Sbjct: 12 SGGSGAGRGGR-----GGWGGRGRRPR 33


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,059,859
Number of Sequences: 37866
Number of extensions: 1126128
Number of successful extensions: 3273
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3259
Number of HSP's gapped (non-prelim): 23
length of query: 789
length of database: 18,247,518
effective HSP length: 110
effective length of query: 679
effective length of database: 14,082,258
effective search space: 9561853182
effective search space used: 9561853182
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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