Search of human proteins with 32967307

Search of human proteins with 32967307

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32967307 coenzyme Q6 homolog isoform b [Homo sapiens]
         (393 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32967307 coenzyme Q6 homolog isoform b [Homo sapiens]              789   0.0  
gi|32967305 coenzyme Q6 homolog isoform a [Homo sapiens]              697   0.0  
gi|187960045 kynurenine 3-monooxygenase [Homo sapiens]                 35   0.15 
gi|223029410 talin 1 [Homo sapiens]                                    33   0.34 
gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo sapi...    32   0.99 
gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo sapi...    32   0.99 
gi|58331161 PHD finger protein 19 isoform a [Homo sapiens]             31   2.2  
gi|194018472 serine (or cysteine) proteinase inhibitor, clade A ...    30   3.8  
gi|62865635 squalene epoxidase [Homo sapiens]                          30   4.9  
gi|34335251 disks large-associated protein 4 isoform b [Homo sap...    29   6.4  
gi|34335253 disks large-associated protein 4 isoform a [Homo sap...    29   6.4  
gi|149192845 ubiquitin specific protease 24 [Homo sapiens]             29   6.4  

>gi|32967307 coenzyme Q6 homolog isoform b [Homo sapiens]
          Length = 393

 Score =  789 bits (2037), Expect = 0.0
 Identities = 393/393 (100%), Positives = 393/393 (100%)

Query: 1   MIFTFMTRKSCCSKQVQRKYWRNCQKLTATGSAPFPLALQRFSVVWDACSEALIMFDKDN 60
           MIFTFMTRKSCCSKQVQRKYWRNCQKLTATGSAPFPLALQRFSVVWDACSEALIMFDKDN
Sbjct: 1   MIFTFMTRKSCCSKQVQRKYWRNCQKLTATGSAPFPLALQRFSVVWDACSEALIMFDKDN 60

Query: 61  LDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGD 120
           LDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGD
Sbjct: 61  LDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGD 120

Query: 121 GSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSG 180
           GSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSG
Sbjct: 121 GSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSG 180

Query: 181 PIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQ 240
           PIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQ
Sbjct: 181 PIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQ 240

Query: 241 YAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLA 300
           YAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLA
Sbjct: 241 YAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLA 300

Query: 301 GQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYS 360
           GQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYS
Sbjct: 301 GQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYS 360

Query: 361 TSASPLVLLRTWGLQATNAVSPLKEQIMAFASK 393
           TSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
Sbjct: 361 TSASPLVLLRTWGLQATNAVSPLKEQIMAFASK 393


>gi|32967305 coenzyme Q6 homolog isoform a [Homo sapiens]
          Length = 468

 Score =  697 bits (1800), Expect = 0.0
 Identities = 349/349 (100%), Positives = 349/349 (100%)

Query: 45  VWDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCP 104
           VWDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCP
Sbjct: 120 VWDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCP 179

Query: 105 FPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLS 164
           FPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLS
Sbjct: 180 FPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLS 239

Query: 165 EATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWS 224
           EATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWS
Sbjct: 240 EATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWS 299

Query: 225 DADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRP 284
           DADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRP
Sbjct: 300 DADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRP 359

Query: 285 RVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRH 344
           RVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRH
Sbjct: 360 RVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRH 419

Query: 345 NTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK 393
           NTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
Sbjct: 420 NTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK 468


>gi|187960045 kynurenine 3-monooxygenase [Homo sapiens]
          Length = 486

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 281 YVRPRVALIGDAAHRVHPLAGQGVNMGFGD 310
           + +    L+GDAAH + P  GQG+N GF D
Sbjct: 294 HFKSHCVLLGDAAHAIVPFFGQGMNAGFED 323


>gi|223029410 talin 1 [Homo sapiens]
          Length = 2541

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 6/122 (4%)

Query: 149  SWNYDQSAVVATLHLSEATENNV-----AWQRFLPSGPIALLPLSDTLSSLVWSTSHEHA 203
            S N+++  + A   ++ AT   V     A +  +  G +  +P ++ L    WS     A
Sbjct: 2338 SLNFEEQILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIP-ANALDDGQWSQGLISA 2396

Query: 204  AELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARV 263
            A +V+       +A N+A    A     I +A  +      LL   KV A Q   ++ R+
Sbjct: 2397 ARMVAAATNNLCEAANAAVQGHASQEKLISSAKQVAASTAQLLVACKVKADQDSEAMKRL 2456

Query: 264  DA 265
             A
Sbjct: 2457 QA 2458


>gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo
           sapiens]
          Length = 1906

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 53/252 (21%)

Query: 32  SAPFPLALQRFSVVWDACSE----ALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDR 87
           S+P PL+  +FS +           L++F          + E+ +++H+L     +V   
Sbjct: 383 SSPLPLSGGKFSTLLQNLGPENAVTLLVFA---------VTEHKILIHSLRP---SVLTS 430

Query: 88  VTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQN 147
           VT    S    + WPCP+      P   + L D  +     ++G D     +        
Sbjct: 431 VTEALVSMIFPFHWPCPY-----VPLCPLALADVLSAPCPFIVGIDSRYFDL-------- 477

Query: 148 VSWNYDQSAVVATLHLSEAT------ENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHE 201
               YD    V+ + +   T      + NVAW + LP  P     L +TL++L     H+
Sbjct: 478 ----YDPPPDVSCVDVDTNTISQIGDKKNVAW-KILPKKPCK--NLMNTLNNL-----HQ 525

Query: 202 HAAELVS--MDEEKFVDAVNSAFWSDADHTDFID--TAGAMLQYAVSLLKPTKVSARQL- 256
             A+L     D+     A+N   ++       ID     A L +  S+LK  +   R + 
Sbjct: 526 QLAKLQQRPRDDGLMDLAINDYDFNSGKRLHMIDLEIQEAFLFFMASILKGYRSYLRPIT 585

Query: 257 -PPSVARVDAKS 267
             PS    DA S
Sbjct: 586 QAPSETATDAAS 597


>gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo
           sapiens]
          Length = 1863

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 53/252 (21%)

Query: 32  SAPFPLALQRFSVVWDACSE----ALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDR 87
           S+P PL+  +FS +           L++F          + E+ +++H+L     +V   
Sbjct: 383 SSPLPLSGGKFSTLLQNLGPENAVTLLVFA---------VTEHKILIHSLRP---SVLTS 430

Query: 88  VTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQN 147
           VT    S    + WPCP+      P   + L D  +     ++G D     +        
Sbjct: 431 VTEALVSMIFPFHWPCPY-----VPLCPLALADVLSAPCPFIVGIDSRYFDL-------- 477

Query: 148 VSWNYDQSAVVATLHLSEAT------ENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHE 201
               YD    V+ + +   T      + NVAW + LP  P     L +TL++L     H+
Sbjct: 478 ----YDPPPDVSCVDVDTNTISQIGDKKNVAW-KILPKKPCK--NLMNTLNNL-----HQ 525

Query: 202 HAAELVS--MDEEKFVDAVNSAFWSDADHTDFID--TAGAMLQYAVSLLKPTKVSARQL- 256
             A+L     D+     A+N   ++       ID     A L +  S+LK  +   R + 
Sbjct: 526 QLAKLQQRPRDDGLMDLAINDYDFNSGKRLHMIDLEIQEAFLFFMASILKGYRSYLRPIT 585

Query: 257 -PPSVARVDAKS 267
             PS    DA S
Sbjct: 586 QAPSETATDAAS 597


>gi|58331161 PHD finger protein 19 isoform a [Homo sapiens]
          Length = 580

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 7/57 (12%)

Query: 185 LPLSDTLSSLVWSTSHEHAAELV--SMDEEKFVDAVNSA--FWSDADHTDFIDTAGA 237
           +P SD  S+  WST+H H A +   ++DE + + + +S   F+SD D TD   T+G+
Sbjct: 404 IPSSDFTSA--WSTNH-HLASIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGS 457


>gi|194018472 serine (or cysteine) proteinase inhibitor, clade A
           (alpha-1 antiproteinase, antitrypsin), member 5 [Homo
           sapiens]
          Length = 406

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/46 (36%), Positives = 27/46 (58%)

Query: 205 ELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPTK 250
           +LV   ++ FV A+ + + +D   T+F D+AGAM Q    + K TK
Sbjct: 136 DLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTK 181


>gi|62865635 squalene epoxidase [Homo sapiens]
          Length = 574

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 286 VALIGDAAHRVHPLAGQGVNMGFGDI 311
           V L+GDA +  HPL G G+ + F DI
Sbjct: 403 VLLLGDAYNMRHPLTGGGMTVAFKDI 428


>gi|34335251 disks large-associated protein 4 isoform b [Homo
           sapiens]
          Length = 453

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 96  AIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQS 155
           A + T P   P   S P++ +T+   +       + +  H S V    G+ N S + D S
Sbjct: 17  AYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSS 76

Query: 156 AVVATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAA 204
                      T   VA     P  P     L     +L  S SH  AA
Sbjct: 77  T-----RPPSVTRGGVAPAPEAPEPPPKHAALKSEQGTLTSSESHPEAA 120


>gi|34335253 disks large-associated protein 4 isoform a [Homo
           sapiens]
          Length = 989

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 96  AIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQS 155
           A + T P   P   S P++ +T+   +       + +  H S V    G+ N S + D S
Sbjct: 556 AYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSS 615

Query: 156 AVVATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAA 204
                      T   VA     P  P     L     +L  S SH  AA
Sbjct: 616 T-----RPPSVTRGGVAPAPEAPEPPPKHAALKSEQGTLTSSESHPEAA 659


>gi|149192845 ubiquitin specific protease 24 [Homo sapiens]
          Length = 2460

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 129  LIGADGHNSGVRQAVGIQNVSW-NYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL 187
            L+GA   N+ +R+    Q   + N   +  +  LH   +++ NVA   F    PI++ P 
Sbjct: 2156 LLGASRQNNQIRRWSSAQAREFGNLHNTVALLVLHSDVSSQRNVAPGIFKQRPPISIAPS 2215

Query: 188  SDTLSSLVWSTSHEHAAELVSMDEEK 213
            S  L        HE    L+ M E K
Sbjct: 2216 SPLL------PLHEEVEALLFMSEGK 2235


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.131    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,811,857
Number of Sequences: 37866
Number of extensions: 569398
Number of successful extensions: 1310
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1305
Number of HSP's gapped (non-prelim): 13
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.