Search of human proteins with 31543060

Search of human proteins with 31543060

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31543060 DHDPS-like protein isoform 1 [Homo sapiens]
         (327 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31543060 DHDPS-like protein isoform 1 [Homo sapiens]               660   0.0  
gi|197927274 DHDPS-like protein isoform 2 [Homo sapiens]              202   3e-52
gi|13540533 N-acetylneuraminate pyruvate lyase [Homo sapiens]          83   3e-16
gi|113424170 PREDICTED: similar to hCG28707 [Homo sapiens]             31   1.7  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    30   2.9  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    30   2.9  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    30   3.8  
gi|122937498 hypothetical LOC646603 [Homo sapiens]                     30   3.8  
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       28   8.5  

>gi|31543060 DHDPS-like protein isoform 1 [Homo sapiens]
          Length = 327

 Score =  660 bits (1702), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MLGPQVWSSVRQGLSRSLSRNVGVWASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEEN 60
           MLGPQVWSSVRQGLSRSLSRNVGVWASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEEN
Sbjct: 1   MLGPQVWSSVRQGLSRSLSRNVGVWASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEEN 60

Query: 61  LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVE 120
           LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVE
Sbjct: 61  LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVE 120

Query: 121 MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPV 180
           MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPV
Sbjct: 121 MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPV 180

Query: 181 DAVVTLSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVC 240
           DAVVTLSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVC
Sbjct: 181 DAVVTLSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVC 240

Query: 241 ALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGG 300
           ALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGG
Sbjct: 241 ALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGG 300

Query: 301 PCRAPLQELSPAEEEALRMDFTSNGWL 327
           PCRAPLQELSPAEEEALRMDFTSNGWL
Sbjct: 301 PCRAPLQELSPAEEEALRMDFTSNGWL 327


>gi|197927274 DHDPS-like protein isoform 2 [Homo sapiens]
          Length = 164

 Score =  202 bits (514), Expect = 3e-52
 Identities = 94/94 (100%), Positives = 94/94 (100%)

Query: 234 GAVGGVCALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMD 293
           GAVGGVCALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMD
Sbjct: 71  GAVGGVCALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMD 130

Query: 294 WFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL 327
           WFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL
Sbjct: 131 WFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL 164



 Score =  149 bits (377), Expect = 3e-36
 Identities = 72/73 (98%), Positives = 72/73 (98%)

Query: 1  MLGPQVWSSVRQGLSRSLSRNVGVWASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEEN 60
          MLGPQVWSSVRQGLSRSLSRNVGVWASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEEN
Sbjct: 1  MLGPQVWSSVRQGLSRSLSRNVGVWASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEEN 60

Query: 61 LHKLGTFPFRGFV 73
          LHKLGTFPFRG V
Sbjct: 61 LHKLGTFPFRGAV 73


>gi|13540533 N-acetylneuraminate pyruvate lyase [Homo sapiens]
          Length = 320

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 17/306 (5%)

Query: 32  KVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFP-FRGFVVQGSNGEFPFLTSSERL 90
           K  + G+     TP T   E+++  + + +  L      +   V G+ GE   L+ SER 
Sbjct: 5   KKKLQGLVAATITPMTENGEINFSVIGQYVDYLVKEQGVKNIFVNGTTGEGLSLSVSERR 64

Query: 91  EVVSR-VRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAA 149
           +V    V +   K   ++   G  S + + E+    A++GAD   V+ P + +   +   
Sbjct: 65  QVAEEWVTKGKDKLDQVIIHVGALSLKESQELAQHAAEIGADGIAVIAPFFLKP-WTKDI 123

Query: 150 LIHHYTKVADLSP-IPVVLYSVPANTGLDLPVDAVVT--LSQHPNIVGMKDSGGDVTRIG 206
           LI+   +VA  +P +P   Y +PA TG+ +  + ++   L + P   G+K S  D+   G
Sbjct: 124 LINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDTDLLDFG 183

Query: 207 LIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQWEDAQ 266
             V + R+Q F  L G    L+++  +GA G V +  N LG +  Q+        +  A 
Sbjct: 184 QCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQKDFSLAL 243

Query: 267 KLQ---HRLIEPNAAVTRRFGIPGLKKIMDWF-GYYGGPCRAPLQELS-----PAEEEAL 317
             Q    R I  N  V   FG+   K IM    G   GP R PLQ+ S      AE +  
Sbjct: 244 NYQFCIQRFI--NFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASREFTDSAEAKLK 301

Query: 318 RMDFTS 323
            +DF S
Sbjct: 302 SLDFLS 307


>gi|113424170 PREDICTED: similar to hCG28707 [Homo sapiens]
          Length = 486

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 3/128 (2%)

Query: 68  PFRGFVVQGSNGEFPFLTSSERLEVVSRVR-QAMPKNRLLLAGSGCESTQATVEMTVSMA 126
           P RG + +G  G F     S+ +E  +    Q  P   L    S C +  AT+++T +  
Sbjct: 28  PARGSLSRGVLGAFE--VGSQGVEAAASPNGQYGPSWGLAAEESVCPTNVATLQLTDASV 85

Query: 127 QVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTL 186
           Q         + C + G +S      HY +        +   S      L  PV+A++  
Sbjct: 86  QKVVVRISESSSCLHNGLLSGNGCEVHYRRARLFQDAQMPAQSPAYRGDLRAPVNALIKW 145

Query: 187 SQHPNIVG 194
            QH  + G
Sbjct: 146 RQHRQLEG 153


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 247  GAQVCQLERLCCTGQWEDAQKLQHRLIE 274
            GAQV  L+R  CT QW D QK +  +IE
Sbjct: 5019 GAQVDLLQR--CTAQWHDYQKAREEVIE 5044


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 247  GAQVCQLERLCCTGQWEDAQKLQHRLIE 274
            GAQV  L+R  CT QW D QK +  +IE
Sbjct: 5090 GAQVDLLQR--CTAQWHDYQKAREEVIE 5115


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 12/120 (10%)

Query: 155  TKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVGMKDSGGDVTRIGLIVHKTRK 214
            T  A    + V +  V A TG     +A++     P++   KDS         +V  TR 
Sbjct: 6351 THTARPPSMQVTIEDVQAQTGGTAQFEAIIEGDPQPSVTWYKDS-------VQLVDSTRL 6403

Query: 215  QDFQVLAGSAGFLMASYALGAVGGV--CALANVLGAQVCQLERLCCTGQWE-DAQKLQHR 271
               Q   G+   L+  +      GV  C   N  G  +C+ E L   G  E D++K  HR
Sbjct: 6404 SQQQ--EGTTYSLVLRHVASKDAGVYTCLAQNTGGQVLCKAELLVLGGDNEPDSEKQSHR 6461


>gi|122937498 hypothetical LOC646603 [Homo sapiens]
          Length = 202

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 11  RQGLSRSLSRNVGVWASGEGKKVDIAGIYPPVTTPFTATAEVDYG 55
           +  L+ S + ++  WA G  +  DI G++P +T PF  + +V +G
Sbjct: 78  QMSLTNSSACHLLCWA-GTQETTDIKGLFPDITRPFKKSFDVKHG 121


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 14/117 (11%)

Query: 84   LTSSERLEVVSRVRQAMPKNRLLLA----GSGCESTQATVEMTVSMAQVGADAAMVVTPC 139
            L + + L ++S +  A+P+N++  A    GSG  ST  T   T S     A A+   TP 
Sbjct: 3448 LLTEKLLRLLSLISIALPENKVSEAQANSGSGASST-TTATSTTSTTTTTA-ASTTPTPP 3505

Query: 140  YYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVGMK 196
                 ++SA  +   T ++ +         V A+T +  P  A  T+S  P   G K
Sbjct: 3506 TAPTPVTSAPALVAATAISTI--------VVAASTTVTTPTTATTTVSISPTTKGSK 3554


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,232,428
Number of Sequences: 37866
Number of extensions: 519805
Number of successful extensions: 1041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1037
Number of HSP's gapped (non-prelim): 10
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.