Guide to the Human Genome
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Search of human proteins with 30581137

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30581137 phosphatidylinositol glycan anchor biosynthesis,
class Z [Homo sapiens]
         (579 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30581137 phosphatidylinositol glycan anchor biosynthesis, cla...  1185   0.0  
gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]       62   1e-09
gi|5032213 solute carrier family 35, member B1 [Homo sapiens]          31   2.7  
gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo...    31   3.6  
gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo sa...    30   6.1  
gi|150417996 ubiquitin-activating enzyme E1-like 2 [Homo sapiens]      30   7.9  
gi|21264623 suppression of tumorigenicity 7-like isoform 4 [Homo...    30   7.9  
gi|21264621 suppression of tumorigenicity 7-like isoform 3 [Homo...    30   7.9  
gi|20270257 suppression of tumorigenicity 7-like isoform 1 [Homo...    30   7.9  

>gi|30581137 phosphatidylinositol glycan anchor biosynthesis, class
           Z [Homo sapiens]
          Length = 579

 Score = 1185 bits (3066), Expect = 0.0
 Identities = 579/579 (100%), Positives = 579/579 (100%)

Query: 1   MQICGSSVASVAAGTSFQVLGPVCWQQLDLKMAVRVLWGGLSLLRVLWCLLPQTGYVHPD 60
           MQICGSSVASVAAGTSFQVLGPVCWQQLDLKMAVRVLWGGLSLLRVLWCLLPQTGYVHPD
Sbjct: 1   MQICGSSVASVAAGTSFQVLGPVCWQQLDLKMAVRVLWGGLSLLRVLWCLLPQTGYVHPD 60

Query: 61  EFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGSTFWLLRLWEELGPWPGLV 120
           EFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGSTFWLLRLWEELGPWPGLV
Sbjct: 61  EFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGSTFWLLRLWEELGPWPGLV 120

Query: 121 SGYALLVGPRLLLTALSFALDGAVYHLAPPMGADRWNALALLSGSYVTLVFYTRTFSNTI 180
           SGYALLVGPRLLLTALSFALDGAVYHLAPPMGADRWNALALLSGSYVTLVFYTRTFSNTI
Sbjct: 121 SGYALLVGPRLLLTALSFALDGAVYHLAPPMGADRWNALALLSGSYVTLVFYTRTFSNTI 180

Query: 181 EGLLFTWLLVLVSSHVTWGPTRKEPAPGPRWRSWLLGGIVAAGFFNRPTFLAFAVVPLYL 240
           EGLLFTWLLVLVSSHVTWGPTRKEPAPGPRWRSWLLGGIVAAGFFNRPTFLAFAVVPLYL
Sbjct: 181 EGLLFTWLLVLVSSHVTWGPTRKEPAPGPRWRSWLLGGIVAAGFFNRPTFLAFAVVPLYL 240

Query: 241 WGTRGATNPGLKSLTREALVLLPGAALTAAVFVATDSWYFSSPATSRNLVLTPVNFLHYN 300
           WGTRGATNPGLKSLTREALVLLPGAALTAAVFVATDSWYFSSPATSRNLVLTPVNFLHYN
Sbjct: 241 WGTRGATNPGLKSLTREALVLLPGAALTAAVFVATDSWYFSSPATSRNLVLTPVNFLHYN 300

Query: 301 LNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQRLQVGLQASAQMGLLRALGAR 360
           LNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQRLQVGLQASAQMGLLRALGAR
Sbjct: 301 LNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQRLQVGLQASAQMGLLRALGAR 360

Query: 361 SLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPVPWKGTVVLFN 420
           SLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPVPWKGTVVLFN
Sbjct: 361 SLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPVPWKGTVVLFN 420

Query: 421 ALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMPPRHLLHLPGLGA 480
           ALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMPPRHLLHLPGLGA
Sbjct: 421 ALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMPPRHLLHLPGLGA 480

Query: 481 PVEVVDMGGTEDWALCQTLKSFTRQPACQVAGGPWLCRLFVVTPGTTRRAVEKCSFPFKN 540
           PVEVVDMGGTEDWALCQTLKSFTRQPACQVAGGPWLCRLFVVTPGTTRRAVEKCSFPFKN
Sbjct: 481 PVEVVDMGGTEDWALCQTLKSFTRQPACQVAGGPWLCRLFVVTPGTTRRAVEKCSFPFKN 540

Query: 541 ETLLFPHLTLEDPPALSSLLSGAWRDHLSLHIVELGEET 579
           ETLLFPHLTLEDPPALSSLLSGAWRDHLSLHIVELGEET
Sbjct: 541 ETLLFPHLTLEDPPALSSLLSGAWRDHLSLHIVELGEET 579


>gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]
          Length = 554

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 115/455 (25%), Positives = 175/455 (38%), Gaps = 86/455 (18%)

Query: 44  LRVLWCLLPQTGYVHPDEFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGST 103
           LR+L C L QT +V PDE++QS EV    +        WE+  +   RS  +PL+ + S 
Sbjct: 70  LRILNCFLVQTSFV-PDEYWQSLEVSHHMVFNY-GYLTWEW--TERLRSYTYPLIFA-SI 124

Query: 104 FWLLRLWEELGPWPGLVSGYALLVGPRLLLTALSFALDGAVYHLAPPMGAD---RWNALA 160
           + +L L        G  S   L+  PRL    LS   D  +Y L   +      RW    
Sbjct: 125 YKILHLL-------GKDSVQLLIWIPRLAQALLSAVADVRLYSLMKQLENQEVARWVFFC 177

Query: 161 LLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSSHVTWGPTRKEPAPGPR-WRSWLLGGI 219
            L  S+ T    TRT +NT+E +L    L               P  G +   S     +
Sbjct: 178 QLC-SWFTWYCCTRTLTNTMETVLTIIALFYY------------PLEGSKSMNSVKYSSL 224

Query: 220 VAAGFFNRPTFLAFAVVPLYLWGTRGATNPGLKSLTREALVL---LPGAALTAAVFVATD 276
           VA  F  RPT    AV+   LW T        +   +  L+L   LP   +T ++ +  D
Sbjct: 225 VALAFIIRPT----AVI---LW-TPLLFRHFCQEPRKLDLILHHFLPVGFVTLSLSLMID 276

Query: 277 SWYFSSPATSRNLVLTPVNFLHYNLNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQA 336
             +F          L   NFL +N+       +G+H    + +  GF +           
Sbjct: 277 RIFFGQ------WTLVQFNFLKFNVLQNWGTFYGSHPWHWYFS-QGFPVI---------- 319

Query: 337 AWQRLQVGLQASAQMGLLRALGARSLLSSPRSYLLLLYFMPLALL--SAFSHQEARFLIP 394
                         +G            +P+ Y +LL  +   LL  S  SH+E RF+ P
Sbjct: 320 --------------LGTHLPFFIHGCYLAPKRYRILLVTVLWTLLVYSMLSHKEFRFIYP 365

Query: 395 LLVPLVLLCS-PQTQPVPWKGTVVLF----NALGALLFGCLHQGGLVPGLEYLEQVVH-- 447
           +L   ++ C    T    WK   + F    N   AL  G +HQ G +  + ++++V +  
Sbjct: 366 VLPFCMVFCGYSLTHLKTWKKPALSFLFLSNLFLALYTGLVHQRGTLDVMSHIQKVCYNN 425

Query: 448 -----APVLPSTPTHYTLLFTHTYMP-PRHLLHLP 476
                A +    P H T  ++H + P P   L  P
Sbjct: 426 PNKSSASIFIMMPCHSTPYYSHVHCPLPMRFLQCP 460


>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
          Length = 322

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 338 WQRLQVGLQASAQMGLLRALGARSLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLV 397
           W+ L    +  A +  +   G  S L     ++ ++YF PL      +    R    +L 
Sbjct: 227 WEFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITT---TRKFFTILA 283

Query: 398 PLVLLCSPQTQPVPWKGTVVLFNALG 423
            ++L  +P   P+ W GTV++F  LG
Sbjct: 284 SVILFANP-ISPMQWVGTVLVFLGLG 308


>gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo
           sapiens]
          Length = 606

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 20/139 (14%)

Query: 214 WLLGGIVAAGFFNRPTFLAFAVVPLYLWGTRGATN--PGLKSLTREALVLLPGAALT--A 269
           W+   I+    F+ P FL ++VV    W   G+T   P    L    + LL G  LT   
Sbjct: 372 WVWNIILTTSLFSVPFFLTWSVVNSVHW-ANGSTQALPATTILLLLTVWLLVGFPLTVIG 430

Query: 270 AVFVATDSWYFSSPATSRNLVLTPVNFLHYNLNPQNLARHGTHARLTHLAVNGFLLFGVL 329
            +F   ++  F +P  ++N+           + PQ   +    + + H+ V GFL F  +
Sbjct: 431 GIFGKNNASPFDAPCRTKNIA--------REIPPQPWYK----STVIHMTVGGFLPFSAI 478

Query: 330 HAQ---ALQAAWQRLQVGL 345
             +        W R Q  L
Sbjct: 479 SVELYYIFATVWGREQYTL 497


>gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo
           sapiens]
          Length = 1012

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 33  AVRVLWGGLSLLRVLWCLLPQTGYVHPDEFFQSPEVMAEDILGVQAARPWEFYPSSSCRS 92
           A R L   L ++ + + L P T +++ D FF   + +A  +   QA R    Y ++ C  
Sbjct: 499 AARGLNPDLQVIPLTYPLDPTTEHIYGDNFFSRVDGVAAALDSFQARR----YVAARCTH 554

Query: 93  VLFPLLISGST 103
            L PLL +G++
Sbjct: 555 YLKPLLEAGTS 565


>gi|150417996 ubiquitin-activating enzyme E1-like 2 [Homo sapiens]
          Length = 1052

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 52  PQTGYVHPDEFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGS 102
           P T  ++ DEF+   +V+   +  V+A R    Y  S C + L PLL SG+
Sbjct: 547 PTTETIYNDEFYTKQDVIITALDNVEARR----YVDSRCLANLRPLLDSGT 593


>gi|21264623 suppression of tumorigenicity 7-like isoform 4 [Homo
           sapiens]
          Length = 555

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 211 WRSWLLGGIVAAG---FFNRPTFLAFAV-VPLYLWGTRGATNPGLKSLTREALVLLPG-A 265
           WR  L  G+   G   +F     L +A+ +PL L     A    L SLT +  V L G +
Sbjct: 29  WRERLRAGLAGTGASLWFVAGLGLLYALRIPLRLCENLAAVTVFLNSLTPKFYVALTGTS 88

Query: 266 ALTAAVFVATDSWYFSSPATS 286
           +L + +    + WYF    TS
Sbjct: 89  SLISGLIFIFEWWYFHKHGTS 109


>gi|21264621 suppression of tumorigenicity 7-like isoform 3 [Homo
           sapiens]
          Length = 544

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 211 WRSWLLGGIVAAG---FFNRPTFLAFAV-VPLYLWGTRGATNPGLKSLTREALVLLPG-A 265
           WR  L  G+   G   +F     L +A+ +PL L     A    L SLT +  V L G +
Sbjct: 29  WRERLRAGLAGTGASLWFVAGLGLLYALRIPLRLCENLAAVTVFLNSLTPKFYVALTGTS 88

Query: 266 ALTAAVFVATDSWYFSSPATS 286
           +L + +    + WYF    TS
Sbjct: 89  SLISGLIFIFEWWYFHKHGTS 109


>gi|20270257 suppression of tumorigenicity 7-like isoform 1 [Homo
           sapiens]
          Length = 575

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 211 WRSWLLGGIVAAG---FFNRPTFLAFAV-VPLYLWGTRGATNPGLKSLTREALVLLPG-A 265
           WR  L  G+   G   +F     L +A+ +PL L     A    L SLT +  V L G +
Sbjct: 29  WRERLRAGLAGTGASLWFVAGLGLLYALRIPLRLCENLAAVTVFLNSLTPKFYVALTGTS 88

Query: 266 ALTAAVFVATDSWYFSSPATS 286
           +L + +    + WYF    TS
Sbjct: 89  SLISGLIFIFEWWYFHKHGTS 109


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.139    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,642,701
Number of Sequences: 37866
Number of extensions: 1192361
Number of successful extensions: 3134
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3132
Number of HSP's gapped (non-prelim): 10
length of query: 579
length of database: 18,247,518
effective HSP length: 108
effective length of query: 471
effective length of database: 14,157,990
effective search space: 6668413290
effective search space used: 6668413290
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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