BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|30581137 phosphatidylinositol glycan anchor biosynthesis, class Z [Homo sapiens] (579 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|30581137 phosphatidylinositol glycan anchor biosynthesis, cla... 1185 0.0 gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens] 62 1e-09 gi|5032213 solute carrier family 35, member B1 [Homo sapiens] 31 2.7 gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo... 31 3.6 gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo sa... 30 6.1 gi|150417996 ubiquitin-activating enzyme E1-like 2 [Homo sapiens] 30 7.9 gi|21264623 suppression of tumorigenicity 7-like isoform 4 [Homo... 30 7.9 gi|21264621 suppression of tumorigenicity 7-like isoform 3 [Homo... 30 7.9 gi|20270257 suppression of tumorigenicity 7-like isoform 1 [Homo... 30 7.9 >gi|30581137 phosphatidylinositol glycan anchor biosynthesis, class Z [Homo sapiens] Length = 579 Score = 1185 bits (3066), Expect = 0.0 Identities = 579/579 (100%), Positives = 579/579 (100%) Query: 1 MQICGSSVASVAAGTSFQVLGPVCWQQLDLKMAVRVLWGGLSLLRVLWCLLPQTGYVHPD 60 MQICGSSVASVAAGTSFQVLGPVCWQQLDLKMAVRVLWGGLSLLRVLWCLLPQTGYVHPD Sbjct: 1 MQICGSSVASVAAGTSFQVLGPVCWQQLDLKMAVRVLWGGLSLLRVLWCLLPQTGYVHPD 60 Query: 61 EFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGSTFWLLRLWEELGPWPGLV 120 EFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGSTFWLLRLWEELGPWPGLV Sbjct: 61 EFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGSTFWLLRLWEELGPWPGLV 120 Query: 121 SGYALLVGPRLLLTALSFALDGAVYHLAPPMGADRWNALALLSGSYVTLVFYTRTFSNTI 180 SGYALLVGPRLLLTALSFALDGAVYHLAPPMGADRWNALALLSGSYVTLVFYTRTFSNTI Sbjct: 121 SGYALLVGPRLLLTALSFALDGAVYHLAPPMGADRWNALALLSGSYVTLVFYTRTFSNTI 180 Query: 181 EGLLFTWLLVLVSSHVTWGPTRKEPAPGPRWRSWLLGGIVAAGFFNRPTFLAFAVVPLYL 240 EGLLFTWLLVLVSSHVTWGPTRKEPAPGPRWRSWLLGGIVAAGFFNRPTFLAFAVVPLYL Sbjct: 181 EGLLFTWLLVLVSSHVTWGPTRKEPAPGPRWRSWLLGGIVAAGFFNRPTFLAFAVVPLYL 240 Query: 241 WGTRGATNPGLKSLTREALVLLPGAALTAAVFVATDSWYFSSPATSRNLVLTPVNFLHYN 300 WGTRGATNPGLKSLTREALVLLPGAALTAAVFVATDSWYFSSPATSRNLVLTPVNFLHYN Sbjct: 241 WGTRGATNPGLKSLTREALVLLPGAALTAAVFVATDSWYFSSPATSRNLVLTPVNFLHYN 300 Query: 301 LNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQRLQVGLQASAQMGLLRALGAR 360 LNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQRLQVGLQASAQMGLLRALGAR Sbjct: 301 LNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQRLQVGLQASAQMGLLRALGAR 360 Query: 361 SLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPVPWKGTVVLFN 420 SLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPVPWKGTVVLFN Sbjct: 361 SLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPVPWKGTVVLFN 420 Query: 421 ALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMPPRHLLHLPGLGA 480 ALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMPPRHLLHLPGLGA Sbjct: 421 ALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMPPRHLLHLPGLGA 480 Query: 481 PVEVVDMGGTEDWALCQTLKSFTRQPACQVAGGPWLCRLFVVTPGTTRRAVEKCSFPFKN 540 PVEVVDMGGTEDWALCQTLKSFTRQPACQVAGGPWLCRLFVVTPGTTRRAVEKCSFPFKN Sbjct: 481 PVEVVDMGGTEDWALCQTLKSFTRQPACQVAGGPWLCRLFVVTPGTTRRAVEKCSFPFKN 540 Query: 541 ETLLFPHLTLEDPPALSSLLSGAWRDHLSLHIVELGEET 579 ETLLFPHLTLEDPPALSSLLSGAWRDHLSLHIVELGEET Sbjct: 541 ETLLFPHLTLEDPPALSSLLSGAWRDHLSLHIVELGEET 579 >gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens] Length = 554 Score = 62.4 bits (150), Expect = 1e-09 Identities = 115/455 (25%), Positives = 175/455 (38%), Gaps = 86/455 (18%) Query: 44 LRVLWCLLPQTGYVHPDEFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGST 103 LR+L C L QT +V PDE++QS EV + WE+ + RS +PL+ + S Sbjct: 70 LRILNCFLVQTSFV-PDEYWQSLEVSHHMVFNY-GYLTWEW--TERLRSYTYPLIFA-SI 124 Query: 104 FWLLRLWEELGPWPGLVSGYALLVGPRLLLTALSFALDGAVYHLAPPMGAD---RWNALA 160 + +L L G S L+ PRL LS D +Y L + RW Sbjct: 125 YKILHLL-------GKDSVQLLIWIPRLAQALLSAVADVRLYSLMKQLENQEVARWVFFC 177 Query: 161 LLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSSHVTWGPTRKEPAPGPR-WRSWLLGGI 219 L S+ T TRT +NT+E +L L P G + S + Sbjct: 178 QLC-SWFTWYCCTRTLTNTMETVLTIIALFYY------------PLEGSKSMNSVKYSSL 224 Query: 220 VAAGFFNRPTFLAFAVVPLYLWGTRGATNPGLKSLTREALVL---LPGAALTAAVFVATD 276 VA F RPT AV+ LW T + + L+L LP +T ++ + D Sbjct: 225 VALAFIIRPT----AVI---LW-TPLLFRHFCQEPRKLDLILHHFLPVGFVTLSLSLMID 276 Query: 277 SWYFSSPATSRNLVLTPVNFLHYNLNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQA 336 +F L NFL +N+ +G+H + + GF + Sbjct: 277 RIFFGQ------WTLVQFNFLKFNVLQNWGTFYGSHPWHWYFS-QGFPVI---------- 319 Query: 337 AWQRLQVGLQASAQMGLLRALGARSLLSSPRSYLLLLYFMPLALL--SAFSHQEARFLIP 394 +G +P+ Y +LL + LL S SH+E RF+ P Sbjct: 320 --------------LGTHLPFFIHGCYLAPKRYRILLVTVLWTLLVYSMLSHKEFRFIYP 365 Query: 395 LLVPLVLLCS-PQTQPVPWKGTVVLF----NALGALLFGCLHQGGLVPGLEYLEQVVH-- 447 +L ++ C T WK + F N AL G +HQ G + + ++++V + Sbjct: 366 VLPFCMVFCGYSLTHLKTWKKPALSFLFLSNLFLALYTGLVHQRGTLDVMSHIQKVCYNN 425 Query: 448 -----APVLPSTPTHYTLLFTHTYMP-PRHLLHLP 476 A + P H T ++H + P P L P Sbjct: 426 PNKSSASIFIMMPCHSTPYYSHVHCPLPMRFLQCP 460 >gi|5032213 solute carrier family 35, member B1 [Homo sapiens] Length = 322 Score = 31.2 bits (69), Expect = 2.7 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Query: 338 WQRLQVGLQASAQMGLLRALGARSLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLV 397 W+ L + A + + G S L ++ ++YF PL + R +L Sbjct: 227 WEFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITT---TRKFFTILA 283 Query: 398 PLVLLCSPQTQPVPWKGTVVLFNALG 423 ++L +P P+ W GTV++F LG Sbjct: 284 SVILFANP-ISPMQWVGTVLVFLGLG 308 >gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo sapiens] Length = 606 Score = 30.8 bits (68), Expect = 3.6 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 20/139 (14%) Query: 214 WLLGGIVAAGFFNRPTFLAFAVVPLYLWGTRGATN--PGLKSLTREALVLLPGAALT--A 269 W+ I+ F+ P FL ++VV W G+T P L + LL G LT Sbjct: 372 WVWNIILTTSLFSVPFFLTWSVVNSVHW-ANGSTQALPATTILLLLTVWLLVGFPLTVIG 430 Query: 270 AVFVATDSWYFSSPATSRNLVLTPVNFLHYNLNPQNLARHGTHARLTHLAVNGFLLFGVL 329 +F ++ F +P ++N+ + PQ + + + H+ V GFL F + Sbjct: 431 GIFGKNNASPFDAPCRTKNIA--------REIPPQPWYK----STVIHMTVGGFLPFSAI 478 Query: 330 HAQ---ALQAAWQRLQVGL 345 + W R Q L Sbjct: 479 SVELYYIFATVWGREQYTL 497 >gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo sapiens] Length = 1012 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 33 AVRVLWGGLSLLRVLWCLLPQTGYVHPDEFFQSPEVMAEDILGVQAARPWEFYPSSSCRS 92 A R L L ++ + + L P T +++ D FF + +A + QA R Y ++ C Sbjct: 499 AARGLNPDLQVIPLTYPLDPTTEHIYGDNFFSRVDGVAAALDSFQARR----YVAARCTH 554 Query: 93 VLFPLLISGST 103 L PLL +G++ Sbjct: 555 YLKPLLEAGTS 565 >gi|150417996 ubiquitin-activating enzyme E1-like 2 [Homo sapiens] Length = 1052 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Query: 52 PQTGYVHPDEFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGS 102 P T ++ DEF+ +V+ + V+A R Y S C + L PLL SG+ Sbjct: 547 PTTETIYNDEFYTKQDVIITALDNVEARR----YVDSRCLANLRPLLDSGT 593 >gi|21264623 suppression of tumorigenicity 7-like isoform 4 [Homo sapiens] Length = 555 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 211 WRSWLLGGIVAAG---FFNRPTFLAFAV-VPLYLWGTRGATNPGLKSLTREALVLLPG-A 265 WR L G+ G +F L +A+ +PL L A L SLT + V L G + Sbjct: 29 WRERLRAGLAGTGASLWFVAGLGLLYALRIPLRLCENLAAVTVFLNSLTPKFYVALTGTS 88 Query: 266 ALTAAVFVATDSWYFSSPATS 286 +L + + + WYF TS Sbjct: 89 SLISGLIFIFEWWYFHKHGTS 109 >gi|21264621 suppression of tumorigenicity 7-like isoform 3 [Homo sapiens] Length = 544 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 211 WRSWLLGGIVAAG---FFNRPTFLAFAV-VPLYLWGTRGATNPGLKSLTREALVLLPG-A 265 WR L G+ G +F L +A+ +PL L A L SLT + V L G + Sbjct: 29 WRERLRAGLAGTGASLWFVAGLGLLYALRIPLRLCENLAAVTVFLNSLTPKFYVALTGTS 88 Query: 266 ALTAAVFVATDSWYFSSPATS 286 +L + + + WYF TS Sbjct: 89 SLISGLIFIFEWWYFHKHGTS 109 >gi|20270257 suppression of tumorigenicity 7-like isoform 1 [Homo sapiens] Length = 575 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 211 WRSWLLGGIVAAG---FFNRPTFLAFAV-VPLYLWGTRGATNPGLKSLTREALVLLPG-A 265 WR L G+ G +F L +A+ +PL L A L SLT + V L G + Sbjct: 29 WRERLRAGLAGTGASLWFVAGLGLLYALRIPLRLCENLAAVTVFLNSLTPKFYVALTGTS 88 Query: 266 ALTAAVFVATDSWYFSSPATS 286 +L + + + WYF TS Sbjct: 89 SLISGLIFIFEWWYFHKHGTS 109 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.325 0.139 0.454 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,642,701 Number of Sequences: 37866 Number of extensions: 1192361 Number of successful extensions: 3134 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 3132 Number of HSP's gapped (non-prelim): 10 length of query: 579 length of database: 18,247,518 effective HSP length: 108 effective length of query: 471 effective length of database: 14,157,990 effective search space: 6668413290 effective search space used: 6668413290 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.