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Search of human proteins with 30425482
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30425482 ring finger protein 180 isoform 2 [Homo sapiens]
(416 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30425482 ring finger protein 180 isoform 2 [Homo sapiens] 852 0.0
gi|165932346 ring finger protein 180 isoform 1 [Homo sapiens] 840 0.0
gi|6005956 dual specificity phosphatase 12 [Homo sapiens] 38 0.019
gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo sap... 33 0.62
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap... 33 0.62
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap... 33 0.62
gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo sap... 33 0.62
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens] 31 1.8
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens] 31 1.8
gi|40217829 G protein-coupled receptor 68 [Homo sapiens] 31 2.4
gi|239509017 PREDICTED: hypothetical protein, partial [Homo sapi... 30 3.1
gi|4504777 integrin, beta 7 [Homo sapiens] 30 3.1
gi|153945734 teashirt zinc finger homeobox 2 [Homo sapiens] 30 4.0
gi|4557553 emerin [Homo sapiens] 30 5.3
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 30 5.3
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 30 5.3
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 30 5.3
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 30 5.3
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 30 5.3
gi|31083344 chemokine orphan receptor 1 [Homo sapiens] 29 6.9
gi|22748943 hypothetical protein LOC145483 [Homo sapiens] 29 6.9
>gi|30425482 ring finger protein 180 isoform 2 [Homo sapiens]
Length = 416
Score = 852 bits (2200), Expect = 0.0
Identities = 416/416 (100%), Positives = 416/416 (100%)
Query: 1 MKRSKELITKNHSQEETSILRCWKCRKCIASSGCFMEYLENQVIKDKDDSVDAQNICHVW 60
MKRSKELITKNHSQEETSILRCWKCRKCIASSGCFMEYLENQVIKDKDDSVDAQNICHVW
Sbjct: 1 MKRSKELITKNHSQEETSILRCWKCRKCIASSGCFMEYLENQVIKDKDDSVDAQNICHVW 60
Query: 61 HMNVEALPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLSKSRT 120
HMNVEALPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLSKSRT
Sbjct: 61 HMNVEALPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLSKSRT 120
Query: 121 DYQPTQAGRLMRPSVKYLSHPRVQSGCDKEALLTGGGSENRNHRLLNMARNNNDPGRLTE 180
DYQPTQAGRLMRPSVKYLSHPRVQSGCDKEALLTGGGSENRNHRLLNMARNNNDPGRLTE
Sbjct: 121 DYQPTQAGRLMRPSVKYLSHPRVQSGCDKEALLTGGGSENRNHRLLNMARNNNDPGRLTE 180
Query: 181 ALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLT 240
ALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLT
Sbjct: 181 ALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLT 240
Query: 241 LLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPSSFDPSMLLQRFSVAPH 300
LLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPSSFDPSMLLQRFSVAPH
Sbjct: 241 LLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPSSFDPSMLLQRFSVAPH 300
Query: 301 ETQTQRGGEFQCGLEAASVYSDHTNTNNLTFLMDLPSAGRSMPEASDQEEHLSPLDFLHS 360
ETQTQRGGEFQCGLEAASVYSDHTNTNNLTFLMDLPSAGRSMPEASDQEEHLSPLDFLHS
Sbjct: 301 ETQTQRGGEFQCGLEAASVYSDHTNTNNLTFLMDLPSAGRSMPEASDQEEHLSPLDFLHS 360
Query: 361 ANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGKYSGVGLLDHMVSIYLLI 416
ANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGKYSGVGLLDHMVSIYLLI
Sbjct: 361 ANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGKYSGVGLLDHMVSIYLLI 416
>gi|165932346 ring finger protein 180 isoform 1 [Homo sapiens]
Length = 592
Score = 840 bits (2169), Expect = 0.0
Identities = 409/409 (100%), Positives = 409/409 (100%)
Query: 1 MKRSKELITKNHSQEETSILRCWKCRKCIASSGCFMEYLENQVIKDKDDSVDAQNICHVW 60
MKRSKELITKNHSQEETSILRCWKCRKCIASSGCFMEYLENQVIKDKDDSVDAQNICHVW
Sbjct: 1 MKRSKELITKNHSQEETSILRCWKCRKCIASSGCFMEYLENQVIKDKDDSVDAQNICHVW 60
Query: 61 HMNVEALPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLSKSRT 120
HMNVEALPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLSKSRT
Sbjct: 61 HMNVEALPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLSKSRT 120
Query: 121 DYQPTQAGRLMRPSVKYLSHPRVQSGCDKEALLTGGGSENRNHRLLNMARNNNDPGRLTE 180
DYQPTQAGRLMRPSVKYLSHPRVQSGCDKEALLTGGGSENRNHRLLNMARNNNDPGRLTE
Sbjct: 121 DYQPTQAGRLMRPSVKYLSHPRVQSGCDKEALLTGGGSENRNHRLLNMARNNNDPGRLTE 180
Query: 181 ALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLT 240
ALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLT
Sbjct: 181 ALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLT 240
Query: 241 LLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPSSFDPSMLLQRFSVAPH 300
LLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPSSFDPSMLLQRFSVAPH
Sbjct: 241 LLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPSSFDPSMLLQRFSVAPH 300
Query: 301 ETQTQRGGEFQCGLEAASVYSDHTNTNNLTFLMDLPSAGRSMPEASDQEEHLSPLDFLHS 360
ETQTQRGGEFQCGLEAASVYSDHTNTNNLTFLMDLPSAGRSMPEASDQEEHLSPLDFLHS
Sbjct: 301 ETQTQRGGEFQCGLEAASVYSDHTNTNNLTFLMDLPSAGRSMPEASDQEEHLSPLDFLHS 360
Query: 361 ANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGKYSGVGLLDHM 409
ANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGKYSGVGLLDHM
Sbjct: 361 ANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGKYSGVGLLDHM 409
>gi|6005956 dual specificity phosphatase 12 [Homo sapiens]
Length = 340
Score = 37.7 bits (86), Expect = 0.019
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Query: 9 TKNHSQEETSILRCWKCRKCIASSGCFMEYLENQVIKDKDDSVDAQNICHVWHMNVEALP 68
T + ++ + +C KCR+ + S +++ E + + + +
Sbjct: 208 TVSQGLKDEVLYKCRKCRRSLFRSSSILDHREGS----GPIAFAHKRMTPSSMLTTGRQA 263
Query: 69 EWISCLIQKAQWTV--------GKLNCPFCGARLGGFNFVSTPKCSCGQ--LAAVHLSKS 118
+ S I+ QW G+L CP C A+LG FN+ +CSCG+ A + K+
Sbjct: 264 QCTSYFIEPVQWMESALLGVMDGQLLCPKCSAKLGSFNWYG-EQCSCGRWITPAFQIHKN 322
Query: 119 RTD 121
R D
Sbjct: 323 RVD 325
>gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo
sapiens]
Length = 436
Score = 32.7 bits (73), Expect = 0.62
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 191 FEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLTLLPTLYEIHS 250
F+ +NE+L KA K+ QL T + + K ++ +S + L L+++H+
Sbjct: 347 FQQENEEL--KARMDKHMAISRQLSTEQAVLQESLEKESKVNKRLSMENEEL--LWKLHN 402
Query: 251 KTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPS 284
+ + T S +PLQS +NS SF +PS
Sbjct: 403 GDLCSPKRSPTS----SAIPLQSPRNSGSFPSPS 432
>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sapiens]
Length = 1270
Score = 32.7 bits (73), Expect = 0.62
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 191 FEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLTLLPTLYEIHS 250
F+ +NE+L KA K+ QL T + + K ++ +S + L L+++H+
Sbjct: 1181 FQQENEEL--KARMDKHMAISRQLSTEQAVLQESLEKESKVNKRLSMENEEL--LWKLHN 1236
Query: 251 KTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPS 284
+ + T S +PLQS +NS SF +PS
Sbjct: 1237 GDLCSPKRSPTS----SAIPLQSPRNSGSFPSPS 1266
>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sapiens]
Length = 1216
Score = 32.7 bits (73), Expect = 0.62
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 191 FEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLTLLPTLYEIHS 250
F+ +NE+L KA K+ QL T + + K ++ +S + L L+++H+
Sbjct: 1127 FQQENEEL--KARMDKHMAISRQLSTEQAVLQESLEKESKVNKRLSMENEEL--LWKLHN 1182
Query: 251 KTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPS 284
+ + T S +PLQS +NS SF +PS
Sbjct: 1183 GDLCSPKRSPTS----SAIPLQSPRNSGSFPSPS 1212
>gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo
sapiens]
Length = 517
Score = 32.7 bits (73), Expect = 0.62
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 191 FEMKNEKLLSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLTLLPTLYEIHS 250
F+ +NE+L KA K+ QL T + + K ++ +S + L L+++H+
Sbjct: 428 FQQENEEL--KARMDKHMAISRQLSTEQAVLQESLEKESKVNKRLSMENEEL--LWKLHN 483
Query: 251 KTTAYSRLNETQPIDLSGLPLQSSKNSYSFQNPS 284
+ + T S +PLQS +NS SF +PS
Sbjct: 484 GDLCSPKRSPTS----SAIPLQSPRNSGSFPSPS 513
>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
Length = 1424
Score = 31.2 bits (69), Expect = 1.8
Identities = 40/159 (25%), Positives = 58/159 (36%), Gaps = 6/159 (3%)
Query: 159 ENRNHRLLNMARNNNDPGRLTEALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGR 218
+N N+ L + + PG + + P + K+ S P + P +G
Sbjct: 455 QNNNYGLNMSSPPHGSPGLAPNQQNIMISPR--NRGSPKIASHQFSPVAGVHSPMASSGN 512
Query: 219 CATRAFHRKSHSLDLNISEKL--TLLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKN 276
+F S S ISE + +LL TL K +N TQP +S +S
Sbjct: 513 TGNHSFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMNITQPSKVSNQDSKSPLG 572
Query: 277 SYSFQNP--SSFDPSMLLQRFSVAPHETQTQRGGEFQCG 313
Y QNP SS S S + + G E Q G
Sbjct: 573 FYCDQNPVESSMCQSNSRDHLSDKESKESSVEGAENQRG 611
>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
Length = 1420
Score = 31.2 bits (69), Expect = 1.8
Identities = 40/159 (25%), Positives = 58/159 (36%), Gaps = 6/159 (3%)
Query: 159 ENRNHRLLNMARNNNDPGRLTEALCLEVRPTYFEMKNEKLLSKASEPKYQLFVPQLVTGR 218
+N N+ L + + PG + + P + K+ S P + P +G
Sbjct: 455 QNNNYGLNMSSPPHGSPGLAPNQQNIMISPR--NRGSPKIASHQFSPVAGVHSPMASSGN 512
Query: 219 CATRAFHRKSHSLDLNISEKL--TLLPTLYEIHSKTTAYSRLNETQPIDLSGLPLQSSKN 276
+F S S ISE + +LL TL K +N TQP +S +S
Sbjct: 513 TGNHSFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMNITQPSKVSNQDSKSPLG 572
Query: 277 SYSFQNP--SSFDPSMLLQRFSVAPHETQTQRGGEFQCG 313
Y QNP SS S S + + G E Q G
Sbjct: 573 FYCDQNPVESSMCQSNSRDHLSDKESKESSVEGAENQRG 611
>gi|40217829 G protein-coupled receptor 68 [Homo sapiens]
Length = 375
Score = 30.8 bits (68), Expect = 2.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 66 ALPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSC 107
+LP W+ ++Q W+ G L+C CG L ++S C
Sbjct: 83 SLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCC 124
>gi|239509017 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 90
Score = 30.4 bits (67), Expect = 3.1
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 343 PEASDQEEHLSPLDFLHSANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGK 399
PE ++ S S++ S S +R +R R + + RR++RRR +KQ K
Sbjct: 19 PEKKEERRSRSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRRREEKKKQKK 75
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 30.4 bits (67), Expect = 3.1
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 103 PKCSCGQLAAVHLSKSRTDYQPTQAGRLMRPSVKYLSHPRVQSGC 147
P CS GQ HL P + GRL SV LS P ++SGC
Sbjct: 486 PHCSDGQ---GHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGC 527
>gi|153945734 teashirt zinc finger homeobox 2 [Homo sapiens]
Length = 1034
Score = 30.0 bits (66), Expect = 4.0
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 199 LSKASEPKYQLFVPQLVTGRCATRAFHRKSHSLDLNISEKLTLLPTLYEIHSKTTAYSRL 258
L KA+EP L P + +T + KS+ LN+ +K L P S + Y
Sbjct: 706 LGKATEP---LRSPSCSSPSSSTISMFHKSN---LNVMDKPVLSPASTRSASVSRRYLFE 759
Query: 259 NETQPIDLSGLPLQSSKNSYSFQNPSSFDP 288
N QPIDL+ SK + S Q S P
Sbjct: 760 NSDQPIDLT---KSKSKKAESSQAQSCMSP 786
>gi|4557553 emerin [Homo sapiens]
Length = 254
Score = 29.6 bits (65), Expect = 5.3
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 211 VPQLVTGRCATRAFHRKSHSLDLNISEKLTLLPTLYEIHSKTTAYSRLNETQPIDLSGLP 270
V Q VT AFH + H DL S + ++ + +AY + +P+ S
Sbjct: 117 VRQSVTSFPDADAFHHQVHDDDLLSSSEEECKDRERPMYGRDSAYQSITHYRPVSASRSS 176
Query: 271 LQSS----KNSYSFQNPSSFDPSMLLQR 294
L S +S SF + SS S L +R
Sbjct: 177 LDLSYYPTSSSTSFMSSSSSSSSWLTRR 204
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 29.6 bits (65), Expect = 5.3
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 263 PIDLSGLPLQSSKNSYSFQNP-SSFDPSMLLQRFSVAPHETQTQRGGEFQCGLEAASVYS 321
P+++S P + QNP SSF S LL F +P TQ+ G Q L+ S
Sbjct: 111 PLEISQSPPEGEDVQSPLQNPASSFFSSALLSIFQSSPESTQSPFEGFPQSVLQIP--VS 168
Query: 322 DHTNTNNLTFLMDLPSAGRSMPEASDQEEHLSPLDFLHSANFS--LGSINQRLNKRERS 378
+++ ++ P + +S E Q SPL S +FS L SI Q +R +S
Sbjct: 169 AASSSTLVSIFQSSPESTQSPFEGFPQ----SPLQIPVSRSFSSTLLSIFQSSPERTQS 223
>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
Length = 338
Score = 29.6 bits (65), Expect = 5.3
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 360 SANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGK 399
S++ S S + +++R K K+ RRK++++ + L+K+GK
Sbjct: 191 SSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGK 230
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 29.6 bits (65), Expect = 5.3
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 360 SANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGK 399
S++ S S + +++R K K+ RRK++++ + L+K+GK
Sbjct: 202 SSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGK 241
>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
Length = 341
Score = 29.6 bits (65), Expect = 5.3
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 360 SANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGK 399
S++ S S + +++R K K+ RRK++++ + L+K+GK
Sbjct: 191 SSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGK 230
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 29.6 bits (65), Expect = 5.3
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 360 SANFSLGSINQRLNKRERSKLKNLRRKQRRRERWLQKQGK 399
S++ S S + +++R K K+ RRK++++ + L+K+GK
Sbjct: 210 SSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGK 249
>gi|31083344 chemokine orphan receptor 1 [Homo sapiens]
Length = 362
Score = 29.3 bits (64), Expect = 6.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 64 VEALPEWISCLIQKAQWTVGKLNC 87
V +P W+ L+Q QW +G+L C
Sbjct: 94 VLTIPVWVVSLVQHNQWPMGELTC 117
>gi|22748943 hypothetical protein LOC145483 [Homo sapiens]
Length = 647
Score = 29.3 bits (64), Expect = 6.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 334 DLPSAGRSMPEASDQEEHLSPLDFLHSANFSLGSINQRLNK 374
+L G +P AS +E LSP + + S + S GSI Q L +
Sbjct: 33 ELSGDGLVLPRASKLDEFLSPEEEMDSTSDSTGSIYQNLQE 73
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,192,110
Number of Sequences: 37866
Number of extensions: 722398
Number of successful extensions: 2375
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2353
Number of HSP's gapped (non-prelim): 24
length of query: 416
length of database: 18,247,518
effective HSP length: 105
effective length of query: 311
effective length of database: 14,271,588
effective search space: 4438463868
effective search space used: 4438463868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.