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Search of human proteins with 30102940
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30102940 otopetrin 3 [Homo sapiens]
(596 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30102940 otopetrin 3 [Homo sapiens] 1204 0.0
gi|30039714 otopetrin 2 [Homo sapiens] 429 e-120
gi|29725635 otopetrin 1 [Homo sapiens] 284 2e-76
gi|170784861 hedgehog acyltransferase [Homo sapiens] 33 0.74
gi|170784863 hedgehog acyltransferase [Homo sapiens] 33 0.74
gi|239756106 PREDICTED: hypothetical protein [Homo sapiens] 32 1.7
gi|239750635 PREDICTED: hypothetical protein XP_002347460 [Homo ... 32 1.7
gi|239744944 PREDICTED: hypothetical protein XP_002343314 [Homo ... 32 1.7
gi|239755842 PREDICTED: hypothetical protein [Homo sapiens] 31 2.8
gi|239755805 PREDICTED: hypothetical protein [Homo sapiens] 31 2.8
gi|194294510 kinesin family member C3 isoform 2 [Homo sapiens] 31 3.7
gi|194294508 kinesin family member C3 isoform 3 [Homo sapiens] 31 3.7
gi|94536858 kinesin family member C3 isoform 1 [Homo sapiens] 31 3.7
gi|118572599 formin homology 2 domain containing 1 [Homo sapiens] 30 4.8
gi|239754149 PREDICTED: hypothetical protein XP_002345897 [Homo ... 30 6.3
gi|239750378 PREDICTED: hypothetical protein XP_002347409 [Homo ... 30 6.3
gi|239748685 PREDICTED: hypothetical protein XP_002346753 [Homo ... 30 6.3
gi|239744680 PREDICTED: hypothetical protein XP_002343239 [Homo ... 30 6.3
gi|239742708 PREDICTED: hypothetical protein XP_002342610 [Homo ... 30 6.3
gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo... 30 6.3
>gi|30102940 otopetrin 3 [Homo sapiens]
Length = 596
Score = 1204 bits (3115), Expect = 0.0
Identities = 596/596 (100%), Positives = 596/596 (100%)
Query: 1 MGRGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAA 60
MGRGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAA
Sbjct: 1 MGRGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAA 60
Query: 61 TRPRQKSWLVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGD 120
TRPRQKSWLVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGD
Sbjct: 61 TRPRQKSWLVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGD 120
Query: 121 VWILLATLKVLSLLWLLYYVASTTRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFR 180
VWILLATLKVLSLLWLLYYVASTTRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFR
Sbjct: 121 VWILLATLKVLSLLWLLYYVASTTRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFR 180
Query: 181 VGYDVSHIRCKSQLDLVFSVIEMVFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNL 240
VGYDVSHIRCKSQLDLVFSVIEMVFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNL
Sbjct: 181 VGYDVSHIRCKSQLDLVFSVIEMVFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNL 240
Query: 241 LLWVLAVTNDSMHREIEAELGILMEKSTGNETNTCLCLNATACEAFRRGFLMLYPFSTEY 300
LLWVLAVTNDSMHREIEAELGILMEKSTGNETNTCLCLNATACEAFRRGFLMLYPFSTEY
Sbjct: 241 LLWVLAVTNDSMHREIEAELGILMEKSTGNETNTCLCLNATACEAFRRGFLMLYPFSTEY 300
Query: 301 CLICCAVLFVMWKNVGRHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQI 360
CLICCAVLFVMWKNVGRHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQI
Sbjct: 301 CLICCAVLFVMWKNVGRHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQI 360
Query: 361 EASGPAIACQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLM 420
EASGPAIACQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLM
Sbjct: 361 EASGPAIACQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLM 420
Query: 421 GAALGQMGIAYFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWET 480
GAALGQMGIAYFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWET
Sbjct: 421 GAALGQMGIAYFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWET 480
Query: 481 VPEGLAGKQEAEPPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFLILCNIT 540
VPEGLAGKQEAEPPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFLILCNIT
Sbjct: 481 VPEGLAGKQEAEPPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFLILCNIT 540
Query: 541 LWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYLGA 596
LWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYLGA
Sbjct: 541 LWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYLGA 596
>gi|30039714 otopetrin 2 [Homo sapiens]
Length = 562
Score = 429 bits (1103), Expect = e-120
Identities = 231/540 (42%), Positives = 326/540 (60%), Gaps = 33/540 (6%)
Query: 84 QKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGDVWILLATLKVLSLLWLLYYVAST 143
+K G+L S LLA+NV+ L I FNKVAV DV+ LL + +L+ LW+L+Y+ T
Sbjct: 25 KKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDTDVFALLTAMMLLATLWILFYLLRT 84
Query: 144 TRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFRVGYDVSHIRCKSQLDLVFSVIEM 203
R P AV Y+D HAGP+W+RG LVLFG CT +++F+ GY S C+S + ++ +I+
Sbjct: 85 VRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVFKTGYYSSFFECQSAIKILHPLIQA 144
Query: 204 VFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNLLLWVLAVTNDSMHREIE------ 257
VF+ +QT+ LW KDCV V + T CGLM TL TNL +W+ AV ++S+H+
Sbjct: 145 VFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTNLAIWMAAVVDESVHQSHSYSSSHS 204
Query: 258 --AELGILMEKSTGNET--NTCLCLNATACEAFRRGFLMLYPFSTEYCLICCAVLFVMWK 313
+ ++ ++ N ++CLC A C+ F++G+ LYPF+ EY L +L+VMWK
Sbjct: 205 NASHARLISDQHADNPVGGDSCLCSTA-VCQIFQQGYFYLYPFNIEYSLFASTMLYVMWK 263
Query: 314 NVGRHVAPHMGAHPATAPFHLHGAIF--GPLLGLLVLLAGVCVFVLFQIEASGPAIAC-Q 370
NVGR +A G P L F GP+LGLL+ + G+ VF++++++ SG Q
Sbjct: 264 NVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLFVVGLAVFIIYEVQVSGDGSRTRQ 323
Query: 371 YFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLMGAALGQMGIA 430
+YY+F + L +L L+G+ I+ + R +D KNPTR+LDV LLMGAALGQ I+
Sbjct: 324 ALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHHKNPTRTLDVALLMGAALGQYAIS 383
Query: 431 YFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWETVPEGLAGKQE 490
Y+SIVA+VA P +LL L L ++LL+I QH QN+FIIE LHR P P K+
Sbjct: 384 YYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMFIIESLHRGPP-GAEPHSTHPKEP 442
Query: 491 AE----------------PPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFL 534
+ PP G L+ QR ++A + S W+R+ LK+ISLFL
Sbjct: 443 CQDLTFTNLDALHTLSACPPNPG-LVSPSPSDQREAVAIV-STPRSQWRRQCLKDISLFL 500
Query: 535 ILCNITLWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYL 594
+LCN+ LW+MPAFG P F N +E DFYGY +W IVN LP G+FYRMH+V L+EVY+
Sbjct: 501 LLCNVILWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNICLPFGIFYRMHAVSSLLEVYV 560
>gi|29725635 otopetrin 1 [Homo sapiens]
Length = 612
Score = 284 bits (726), Expect = 2e-76
Identities = 181/559 (32%), Positives = 265/559 (47%), Gaps = 53/559 (9%)
Query: 84 QKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGDVWILLATLKVLSLLWLLYYVAST 143
QK ++ S L V G + + + V+ D+ L L +L LLW+L+YV +
Sbjct: 55 QKLAEMLSSQYGLIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTALMLLQLLWMLWYVGRS 114
Query: 144 TRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFRVGYDVSHIRCKSQLDLVFSVIEM 203
+ +D HAG W+RGS+ LF T L ++GY + C S + VF V
Sbjct: 115 SAHRRLFRLKDTHAGAGWLRGSITLFAVITVILGCLKIGYFIGFSECLSATEGVFPVTHS 174
Query: 204 VFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNLLLWVLAVTNDSMHREIEAELGIL 263
V +Q + LW H KD ++ R G++ ++ TNLLLW V N+S H ++ L
Sbjct: 175 VHTLLQVYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWANGVLNESKH-QLNEHKERL 233
Query: 264 MEKSTGN-------ETNTCLCLNATACEAFRRGFLMLYPFSTEYCLICCAVLFVMWKNVG 316
+ GN T C C T C A G LYPF+ EY ++ +L+V+WKN+G
Sbjct: 234 ITLGFGNITTVLDDHTPQCNCTPPTLCTAISHGIYYLYPFNIEYQILASTMLYVLWKNIG 293
Query: 317 RHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQIEASGPAIACQ-YFTLY 375
R V H F G + G +LGL VL A + V V++ I + ++
Sbjct: 294 RKVDSH---QHQKMQFKSDGVMVGAVLGLTVLAATIAVVVVYLIHIGRSKTKSESALIMF 350
Query: 376 YAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLMGAALGQMGIAYFSIV 435
Y + + +L M A LAG I+ ++E+ LD KNP R LD LL+G A G I++ SI+
Sbjct: 351 YLYAITLLMLMGAAGLAGIRIYRIDEKSLDESKNPARKLDSDLLVGTASGSWLISWGSIL 410
Query: 436 AIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRP--LWE--------TVPEGL 485
AI+ H L YS+L I++ QNLFI E +HR P L E TV G
Sbjct: 411 AILCAEGHPRYTWYNLPYSILAIVEKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGN 470
Query: 486 AGKQEAEPPRRGSLLE----LGQGLQRA---------------------------SLAYI 514
+ P+ G + G+ + A S +
Sbjct: 471 TMPLASSCPKSGGVARDVAPQGKDMPPAANGNVCMRESHDKEEEKQEESSWGGSPSPVRL 530
Query: 515 HSYSHLNWKRRALKEISLFLILCNITLWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFG 574
+ N KR+ L+ I+ FL LCNI+LW+ PAFG PE++NGLE+ +G++ W +VN
Sbjct: 531 PRFLQGNAKRKVLRNIAAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLA 590
Query: 575 LPLGVFYRMHSVGGLVEVY 593
+P +FYRMH+ L EVY
Sbjct: 591 MPFSIFYRMHAAASLFEVY 609
>gi|170784861 hedgehog acyltransferase [Homo sapiens]
Length = 493
Score = 33.1 bits (74), Expect = 0.74
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 69 LVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGDVWILLATL 128
L R+FS RR A A S L+ N+VFLGG + +N++ + G W+ TL
Sbjct: 415 LARYFSPQARRRFHAALASCSTSMLILSNLVFLGGNEVGKTYWNRIFIQ-GWPWV---TL 470
Query: 129 KVLSLLWLLYYVASTTRRPHA 149
VL L+ +V + +A
Sbjct: 471 SVLGFLYCYSHVGIAWAQTYA 491
>gi|170784863 hedgehog acyltransferase [Homo sapiens]
Length = 493
Score = 33.1 bits (74), Expect = 0.74
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 69 LVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGDVWILLATL 128
L R+FS RR A A S L+ N+VFLGG + +N++ + G W+ TL
Sbjct: 415 LARYFSPQARRRFHAALASCSTSMLILSNLVFLGGNEVGKTYWNRIFIQ-GWPWV---TL 470
Query: 129 KVLSLLWLLYYVASTTRRPHA 149
VL L+ +V + +A
Sbjct: 471 SVLGFLYCYSHVGIAWAQTYA 491
>gi|239756106 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 32.0 bits (71), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 24 PGRTIRSAPAVGEAQETEAAPEKENRVDVGAEE 56
P T+ +APA G A T AAP +E +V+ EE
Sbjct: 107 PAPTVGAAPAEGPAPTTTAAPAEEKKVETKKEE 139
>gi|239750635 PREDICTED: hypothetical protein XP_002347460 [Homo
sapiens]
Length = 153
Score = 32.0 bits (71), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 24 PGRTIRSAPAVGEAQETEAAPEKENRVDVGAEE 56
P T+ +APA G A T AAP +E +V+ EE
Sbjct: 107 PAPTVGAAPAEGPAPTTTAAPAEEKKVETKKEE 139
>gi|239744944 PREDICTED: hypothetical protein XP_002343314 [Homo
sapiens]
Length = 153
Score = 32.0 bits (71), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 24 PGRTIRSAPAVGEAQETEAAPEKENRVDVGAEE 56
P T+ +APA G A T AAP +E +V+ EE
Sbjct: 107 PAPTVGAAPAEGPAPTTTAAPAEEKKVETKKEE 139
>gi|239755842 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 31.2 bits (69), Expect = 2.8
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 8 AAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAATRPRQKS 67
A + S +GR R + R PA GE + A +R +E+A A PR +
Sbjct: 87 AESSSSYGRGQRLTAKAERN----PADGEGRSPAAGRFSASRRSPRGKEKAEAANPRSRR 142
Query: 68 WLV----RHFSLLLRRDRQAQKAGQL 89
W V R L R A GQL
Sbjct: 143 WRVPPTSRRNLLTRGPGRPAAAKGQL 168
>gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 31.2 bits (69), Expect = 2.8
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 213 LWKHCKDCVRVQTNFTRCGL--MLTLATNLLLWVLAVTNDSMHREIEAELGIL-MEKSTG 269
++KHC + T FT G+ +++ L+ W LA+ D++ + +E GI ++ S
Sbjct: 187 IYKHCPGHMLASTRFTEEGVEGIISSPNGLVTWHLAIGLDAVFQAVELPAGIANLDTSLA 246
Query: 270 NETNTCLCL 278
N L L
Sbjct: 247 NVDGDALTL 255
>gi|194294510 kinesin family member C3 isoform 2 [Homo sapiens]
Length = 826
Score = 30.8 bits (68), Expect = 3.7
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 434 IVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWETVPEGLAGKQEAEP 493
I A+ +++ H L Y L L ++ L +++ P+ + E L + AE
Sbjct: 708 IAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQV---SPVEKNTSETLYSLKFAER 764
Query: 494 PRRGSLLELGQGLQRASLAYIHSYSHLNWK 523
R +ELG GL+RA L S HL W+
Sbjct: 765 VRS---VELGPGLRRAELGSWSSQEHLEWE 791
>gi|194294508 kinesin family member C3 isoform 3 [Homo sapiens]
Length = 687
Score = 30.8 bits (68), Expect = 3.7
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 434 IVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWETVPEGLAGKQEAEP 493
I A+ +++ H L Y L L ++ L +++ P+ + E L + AE
Sbjct: 569 IAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQV---SPVEKNTSETLYSLKFAER 625
Query: 494 PRRGSLLELGQGLQRASLAYIHSYSHLNWK 523
R +ELG GL+RA L S HL W+
Sbjct: 626 VRS---VELGPGLRRAELGSWSSQEHLEWE 652
>gi|94536858 kinesin family member C3 isoform 1 [Homo sapiens]
Length = 833
Score = 30.8 bits (68), Expect = 3.7
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 434 IVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWETVPEGLAGKQEAEP 493
I A+ +++ H L Y L L ++ L +++ P+ + E L + AE
Sbjct: 708 IAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQV---SPVEKNTSETLYSLKFAER 764
Query: 494 PRRGSLLELGQGLQRASLAYIHSYSHLNWK 523
R +ELG GL+RA L S HL W+
Sbjct: 765 VRS---VELGPGLRRAELGSWSSQEHLEWE 791
>gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]
Length = 1164
Score = 30.4 bits (67), Expect = 4.8
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 236 LATNLLLWVLAVTNDSMHREIEA---ELGILMEKSTGNETNTCLCLNATACEAFRRG 289
LA L LW + DSM REI +L + ME+ N T C+ A F G
Sbjct: 777 LAARLQLWAFKLDYDSMEREIAEPLFDLKVGMEQLVQNATFRCILATLLAVGNFLNG 833
>gi|239754149 PREDICTED: hypothetical protein XP_002345897 [Homo
sapiens]
Length = 274
Score = 30.0 bits (66), Expect = 6.3
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 3 RGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAATR 62
RG R + + +W S AS RT+ + GEA+ +EAA K G +R R
Sbjct: 60 RGGRKKSVRQQWWAESAAS---RRTLEGSAGGGEAKLSEAAERKRCPEGRGRRDRPMEVR 116
Query: 63 PRQK 66
+Q+
Sbjct: 117 IQQQ 120
>gi|239750378 PREDICTED: hypothetical protein XP_002347409 [Homo
sapiens]
Length = 183
Score = 30.0 bits (66), Expect = 6.3
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 8 AAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAATRPRQKS 67
A + + +GR R + R PA GE + A +R +E+A A PR +
Sbjct: 87 AESSNSYGRGQRLTAKAERN----PADGEGRSPAAGRFSASRRSPRGKEKAEAANPRSRR 142
Query: 68 WLV----RHFSLLLRRDRQAQKAGQL 89
W V R L R A GQL
Sbjct: 143 WRVPPTSRRNLLTRGPGRPAAAKGQL 168
>gi|239748685 PREDICTED: hypothetical protein XP_002346753 [Homo
sapiens]
Length = 274
Score = 30.0 bits (66), Expect = 6.3
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 3 RGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAATR 62
RG R + + +W S AS RT+ + GEA+ +EAA K G +R R
Sbjct: 60 RGGRKKSVRQQWWAESAAS---RRTLEGSAGGGEAKLSEAAERKRCPEGRGRRDRPMEVR 116
Query: 63 PRQK 66
+Q+
Sbjct: 117 IQQQ 120
>gi|239744680 PREDICTED: hypothetical protein XP_002343239 [Homo
sapiens]
Length = 183
Score = 30.0 bits (66), Expect = 6.3
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 8 AAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAATRPRQKS 67
A + + +GR R + R PA GE + A +R +E+A A PR +
Sbjct: 87 AESSNSYGRGQRLTAKAERN----PADGEGRSPAAGRFSASRRSPRGKEKAEAANPRSRR 142
Query: 68 WLV----RHFSLLLRRDRQAQKAGQL 89
W V R L R A GQL
Sbjct: 143 WRVPPTSRRNLLTRGPGRPAAAKGQL 168
>gi|239742708 PREDICTED: hypothetical protein XP_002342610 [Homo
sapiens]
Length = 274
Score = 30.0 bits (66), Expect = 6.3
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 3 RGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAATR 62
RG R + + +W S AS RT+ + GEA+ +EAA K G +R R
Sbjct: 60 RGGRKKSVRQQWWAESAAS---RRTLEGSAGGGEAKLSEAAERKRCPEGRGRRDRPMEVR 116
Query: 63 PRQK 66
+Q+
Sbjct: 117 IQQQ 120
>gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo
sapiens]
Length = 674
Score = 30.0 bits (66), Expect = 6.3
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 17 ASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDV---------GAEERAAATRPRQKS 67
A + SVSP R+ S P E + EA+ EKE + G + A A RP+ KS
Sbjct: 243 ARKTSVSP-RSSGSDPRSWEYRSGEASEEKEEKAHKETGKGEAAPGPQSSAPAQRPQLKS 301
Query: 68 W 68
W
Sbjct: 302 W 302
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,092,764
Number of Sequences: 37866
Number of extensions: 945013
Number of successful extensions: 3322
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3304
Number of HSP's gapped (non-prelim): 24
length of query: 596
length of database: 18,247,518
effective HSP length: 108
effective length of query: 488
effective length of database: 14,157,990
effective search space: 6909099120
effective search space used: 6909099120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.