Search of human proteins with 30065645

Search of human proteins with 30065645

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30065645 protein phosphatase 2A, regulatory subunit B'
isoform a [Homo sapiens]
         (358 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30065645 protein phosphatase 2A, regulatory subunit B' isofor...   743   0.0  
gi|30065643 protein phosphatase 2A, regulatory subunit B' isofor...   650   0.0  
gi|29725611 protein phosphatase 2A, regulatory subunit B' isofor...   650   0.0  
gi|30065649 protein phosphatase 2A, regulatory subunit B' isofor...   437   e-123
gi|6912464 latrophilin 2 precursor [Homo sapiens]                      30   4.4  
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H...    29   7.4  
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H...    29   7.4  
gi|148596968 tripartite motif-containing 8 [Homo sapiens]              28   9.7  

>gi|30065645 protein phosphatase 2A, regulatory subunit B' isoform a
           [Homo sapiens]
          Length = 358

 Score =  743 bits (1919), Expect = 0.0
 Identities = 358/358 (100%), Positives = 358/358 (100%)

Query: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
           MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61  GKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAPSEAIEKLVALLNTLD 120
           GKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAPSEAIEKLVALLNTLD
Sbjct: 61  GKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAPSEAIEKLVALLNTLD 120

Query: 121 RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 180
           RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN
Sbjct: 121 RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 180

Query: 181 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 240
           STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG
Sbjct: 181 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 240

Query: 241 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 300
           SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT
Sbjct: 241 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 300

Query: 301 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 358
           GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 301 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 358


>gi|30065643 protein phosphatase 2A, regulatory subunit B' isoform b
           [Homo sapiens]
          Length = 323

 Score =  650 bits (1676), Expect = 0.0
 Identities = 323/358 (90%), Positives = 323/358 (90%), Gaps = 35/358 (9%)

Query: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
           MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61  GKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAPSEAIEKLVALLNTLD 120
           GKKLTFEYRVSE                                   AIEKLVALLNTLD
Sbjct: 61  GKKLTFEYRVSE-----------------------------------AIEKLVALLNTLD 85

Query: 121 RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 180
           RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN
Sbjct: 86  RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 145

Query: 181 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 240
           STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG
Sbjct: 146 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 205

Query: 241 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 300
           SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT
Sbjct: 206 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 265

Query: 301 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 358
           GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 266 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 323


>gi|29725611 protein phosphatase 2A, regulatory subunit B' isoform b
           [Homo sapiens]
          Length = 323

 Score =  650 bits (1676), Expect = 0.0
 Identities = 323/358 (90%), Positives = 323/358 (90%), Gaps = 35/358 (9%)

Query: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
           MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61  GKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAPSEAIEKLVALLNTLD 120
           GKKLTFEYRVSE                                   AIEKLVALLNTLD
Sbjct: 61  GKKLTFEYRVSE-----------------------------------AIEKLVALLNTLD 85

Query: 121 RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 180
           RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN
Sbjct: 86  RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 145

Query: 181 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 240
           STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG
Sbjct: 146 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 205

Query: 241 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 300
           SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT
Sbjct: 206 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 265

Query: 301 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 358
           GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 266 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 323


>gi|30065649 protein phosphatase 2A, regulatory subunit B' isoform d
           [Homo sapiens]
          Length = 281

 Score =  437 bits (1124), Expect = e-123
 Identities = 211/217 (97%), Positives = 214/217 (98%)

Query: 142 TWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCL 201
           T+  ++ EEAENLVATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCL
Sbjct: 65  TFEYRVSEEAENLVATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCL 124

Query: 202 CKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQ 261
           CKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQ
Sbjct: 125 CKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQ 184

Query: 262 LIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSK 321
           LIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSK
Sbjct: 185 LIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSK 244

Query: 322 VNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 358
           VNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 245 VNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 281



 Score =  151 bits (382), Expect = 8e-37
 Identities = 72/72 (100%), Positives = 72/72 (100%)

Query: 1  MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
          MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1  MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61 GKKLTFEYRVSE 72
          GKKLTFEYRVSE
Sbjct: 61 GKKLTFEYRVSE 72


>gi|6912464 latrophilin 2 precursor [Homo sapiens]
          Length = 1403

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 23/158 (14%)

Query: 2   AEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMG-KWKRSQ--------------AYA 46
           ++G + PP  S+ + PP T  F +P++    +   G KW ++Q                A
Sbjct: 441 SKGTKPPPAVSTTKIPPITNIFPLPERFCEALDSKGIKWPQTQRGMMVERPCPKGTRGTA 500

Query: 47  DYIGFILTLNEGVKGKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAP- 105
            Y+  I T     KG  L+     +  W     +K ++ + + S    +     G     
Sbjct: 501 SYLCMISTGTWNPKGPDLS---NCTSHWVNQLAQKIRSGENAASLANELAKHTKGPVFAG 557

Query: 106 --SEAIEKLVALLNTLDRWIDETPPVDQPS--RFGNKA 139
             S ++  +  L++ LD  + E  P ++ S  R  NKA
Sbjct: 558 DVSSSVRLMEQLVDILDAQLQELKPSEKDSAGRSYNKA 595


>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
           sapiens]
          Length = 756

 Score = 28.9 bits (63), Expect = 7.4
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 7   QPPPDSSEE-APPAT--QNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKK 63
           +PPPDS E  A P+   QN+   K E   V  +             G + +L   ++  +
Sbjct: 661 KPPPDSQETLALPSLVPQNYTENKNEGVDVTSLR------------GEVESLRRALELME 708

Query: 64  LTFEYRVSEMWNEVHEEKEQAAKQSV 89
           +  E +++++W E+  EKEQ  +  V
Sbjct: 709 VQLERKLTDIWEELKSEKEQRRRLEV 734


>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
           sapiens]
          Length = 645

 Score = 28.9 bits (63), Expect = 7.4
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 7   QPPPDSSEE-APPAT--QNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVKGKK 63
           +PPPDS E  A P+   QN+   K E   V  +             G + +L   ++  +
Sbjct: 550 KPPPDSQETLALPSLVPQNYTENKNEGVDVTSLR------------GEVESLRRALELME 597

Query: 64  LTFEYRVSEMWNEVHEEKEQAAKQSV 89
           +  E +++++W E+  EKEQ  +  V
Sbjct: 598 VQLERKLTDIWEELKSEKEQRRRLEV 623


>gi|148596968 tripartite motif-containing 8 [Homo sapiens]
          Length = 551

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 60  KGKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAPSEA 108
           K  KLT    + E +N +H EK  AA   V C    PLP    C   EA
Sbjct: 67  KNLKLT---NIVEKFNALHVEKPPAALHCVFCRRGPPLPAQKVCLRCEA 112


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,978,876
Number of Sequences: 37866
Number of extensions: 666335
Number of successful extensions: 1729
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1722
Number of HSP's gapped (non-prelim): 11
length of query: 358
length of database: 18,247,518
effective HSP length: 103
effective length of query: 255
effective length of database: 14,347,320
effective search space: 3658566600
effective search space used: 3658566600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.