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Search of human proteins with 28373092
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28373092 sialyltransferase 7D isoform a [Homo sapiens]
(302 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28373092 sialyltransferase 7D isoform a [Homo sapiens] 630 0.0
gi|28373094 sialyltransferase 7D isoform b [Homo sapiens] 454 e-128
gi|229892273 sialyltransferase 7C isoform 1 [Homo sapiens] 278 4e-75
gi|13569938 sialyltransferase 7E [Homo sapiens] 249 3e-66
gi|21361444 sialytransferase 7F [Homo sapiens] 209 3e-54
gi|229892275 sialyltransferase 7C isoform 2 [Homo sapiens] 149 3e-36
gi|5902082 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H... 85 7e-17
gi|27765096 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [... 75 5e-14
gi|4506951 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H... 75 5e-14
gi|215272345 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2... 75 7e-14
gi|26190610 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ... 75 7e-14
gi|110815855 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran... 74 1e-13
gi|215272347 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2... 70 2e-12
gi|5031999 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf... 65 7e-11
gi|28373086 sialyltransferase 6 isoform i [Homo sapiens] 60 3e-09
gi|28373082 sialyltransferase 6 isoform g [Homo sapiens] 60 3e-09
gi|28373078 sialyltransferase 6 isoform f [Homo sapiens] 60 3e-09
gi|28373070 sialyltransferase 6 isoform b [Homo sapiens] 60 3e-09
gi|28373068 sialyltransferase 6 isoform a [Homo sapiens] 60 3e-09
gi|5454060 sialyltransferase 6 isoform j [Homo sapiens] 60 3e-09
gi|4506949 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i... 59 5e-09
gi|27765091 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ... 59 5e-09
gi|4506953 alpha-2,8-sialyltransferase 1 [Homo sapiens] 58 9e-09
gi|28373074 sialyltransferase 6 isoform d [Homo sapiens] 55 8e-08
gi|5174697 alpha2,3-sialyltransferase VI [Homo sapiens] 54 1e-07
gi|21264332 sialyltransferase 7A [Homo sapiens] 54 2e-07
gi|54234057 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans... 52 5e-07
gi|5454058 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H... 52 6e-07
gi|28373101 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans... 52 8e-07
gi|192448440 sialyltransferase 7B [Homo sapiens] 50 2e-06
>gi|28373092 sialyltransferase 7D isoform a [Homo sapiens]
Length = 302
Score = 630 bits (1626), Expect = 0.0
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MKAPGRLVLIILCSVVFSAVYILLCCWAGLPLCLATCLDHHFPTGSRPTVPGPLHFSGYS 60
MKAPGRLVLIILCSVVFSAVYILLCCWAGLPLCLATCLDHHFPTGSRPTVPGPLHFSGYS
Sbjct: 1 MKAPGRLVLIILCSVVFSAVYILLCCWAGLPLCLATCLDHHFPTGSRPTVPGPLHFSGYS 60
Query: 61 SVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRST 120
SVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRST
Sbjct: 61 SVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRST 120
Query: 121 LRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYPGLQ 180
LRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYPGLQ
Sbjct: 121 LRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYPGLQ 180
Query: 181 VYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCR 240
VYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCR
Sbjct: 181 VYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCR 240
Query: 241 EKSHPSVPYHYFEKGRLDECQMYLAHEQAPRSAHRFITEKAVFSRWAKKRPIVFAHPSWR 300
EKSHPSVPYHYFEKGRLDECQMYLAHEQAPRSAHRFITEKAVFSRWAKKRPIVFAHPSWR
Sbjct: 241 EKSHPSVPYHYFEKGRLDECQMYLAHEQAPRSAHRFITEKAVFSRWAKKRPIVFAHPSWR 300
Query: 301 TE 302
TE
Sbjct: 301 TE 302
>gi|28373094 sialyltransferase 7D isoform b [Homo sapiens]
Length = 218
Score = 454 bits (1167), Expect = e-128
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 85 MLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLLLRNYSHYFQKAR 144
MLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLLLRNYSHYFQKAR
Sbjct: 1 MLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLLLRNYSHYFQKAR 60
Query: 145 DTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYPGLQVYTFTERMMAYCDQIFQDETGKNR 204
DTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYPGLQVYTFTERMMAYCDQIFQDETGKNR
Sbjct: 61 DTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYPGLQVYTFTERMMAYCDQIFQDETGKNR 120
Query: 205 RQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYL 264
RQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYL
Sbjct: 121 RQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYL 180
Query: 265 AHEQAPRSAHRFITEKAVFSRWAKKRPIVFAHPSWRTE 302
AHEQAPRSAHRFITEKAVFSRWAKKRPIVFAHPSWRTE
Sbjct: 181 AHEQAPRSAHRFITEKAVFSRWAKKRPIVFAHPSWRTE 218
>gi|229892273 sialyltransferase 7C isoform 1 [Homo sapiens]
Length = 305
Score = 278 bits (711), Expect = 4e-75
Identities = 127/242 (52%), Positives = 175/242 (72%), Gaps = 2/242 (0%)
Query: 58 GYSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQ 117
GY +V +PL + C CA+VS+SGQM+G +G EID + C++RMN APT G+E DVG+
Sbjct: 63 GYINVKTQEPLQLD-CDLCAIVSNSGQMVGQKVGNEIDRSSCIWRMNNAPTKGYEEDVGR 121
Query: 118 RSTLRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYP 177
+ +RVVSHTSVPLLL+N ++F++A T+Y++WG R+M + G Y L + +YP
Sbjct: 122 MTMIRVVSHTSVPLLLKNPDYFFKEANTTIYVIWGPFRNMRKDGNGIVYNMLKKTVGIYP 181
Query: 178 GLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
Q+Y TE+ M+YCD +F+ ETGK+R QSGS+LSTGWFT +LA++ C I VYGM++D+
Sbjct: 182 NAQIYVTTEKRMSYCDGVFKKETGKDRVQSGSYLSTGWFTFLLAMDACYGIHVYGMINDT 241
Query: 238 YCREKSHPSVPYHYFEKGRLDECQMYLAHEQAPRSAHRFITEKAVFSRWAKKRPIVFAHP 297
YC+ + + VPYHY+E+GR DEC Y HE AP HRFITEK VF++WAKK I+F HP
Sbjct: 242 YCKTEGYRKVPYHYYEQGR-DECDEYFLHEHAPYGGHRFITEKKVFAKWAKKHRIIFTHP 300
Query: 298 SW 299
+W
Sbjct: 301 NW 302
>gi|13569938 sialyltransferase 7E [Homo sapiens]
Length = 336
Score = 249 bits (635), Expect = 3e-66
Identities = 125/261 (47%), Positives = 169/261 (64%), Gaps = 3/261 (1%)
Query: 44 TGSRPTVP-GPLHFSGYSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFR 102
T RP VP GP GY V D KPL + CR CA+V+SSG +L S G++ID ECV R
Sbjct: 64 TQQRPGVPAGPRPLDGYLGVADHKPL-KMHCRDCALVTSSGHLLHSRQGSQIDQTECVIR 122
Query: 103 MNQAPTVGFEADVGQRSTLRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLG 162
MN APT G+ DVG R++LRV++H+S+ +LRN ++ T+++ WG +M R
Sbjct: 123 MNDAPTRGYGRDVGNRTSLRVIAHSSIQRILRNRHDLLNVSQGTVFIFWGPSSYMRRDGK 182
Query: 163 GRTYRTLLQLTRMYPGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILAL 222
G+ Y L L+++ P L+ + T M D++F+ ETGK+R+ S ++LSTGWFTM +AL
Sbjct: 183 GQVYNNLHLLSQVLPRLKAFMITRHKMLQFDELFKQETGKDRKISNTWLSTGWFTMTIAL 242
Query: 223 ELCEEIVVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYLAHEQAPR-SAHRFITEKA 281
ELC+ I VYGMV +CR+ +HPSVPYHY+E DEC MYL+HE+ + S HRFITEK
Sbjct: 243 ELCDRINVYGMVPPDFCRDPNHPSVPYHYYEPFGPDECTMYLSHERGRKGSHHRFITEKR 302
Query: 282 VFSRWAKKRPIVFAHPSWRTE 302
VF WA+ I F P W+ E
Sbjct: 303 VFKNWARTFNIHFFQPDWKPE 323
>gi|21361444 sialytransferase 7F [Homo sapiens]
Length = 333
Score = 209 bits (531), Expect = 3e-54
Identities = 104/244 (42%), Positives = 151/244 (61%), Gaps = 4/244 (1%)
Query: 58 GYSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQ 117
GY + K L C C +VSSS +LG+ LG EI+ AEC RMN APT G+ ADVG
Sbjct: 91 GYVPILGNKTLPSR-CHQCVIVSSSSHLLGTKLGPEIERAECTIRMNDAPTTGYSADVGN 149
Query: 118 RSTLRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYP 177
++T RVV+H+SV +LR + + +T+++ WG M + G R + + ++P
Sbjct: 150 KTTYRVVAHSSVFRVLRRPQEFVNRTPETVFIFWGPPSKMQKPQGS-LVRVIQRAGLVFP 208
Query: 178 GLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
++ Y + M D +F+ ETGK+R +S S+LSTGWFTM++A+ELC+ + VYGMV +
Sbjct: 209 NMEAYAVSPGRMRQFDDLFRGETGKDREKSHSWLSTGWFTMVIAVELCDHVHVYGMVPPN 268
Query: 238 YCREKSH-PSVPYHYFEKGRLDECQMYLAHEQAPR-SAHRFITEKAVFSRWAKKRPIVFA 295
YC ++ +PYHY+E DEC Y+ +E + + + HRFITEK VFS WA+ I F+
Sbjct: 269 YCSQRPRLQRMPYHYYEPKGPDECVTYIQNEHSRKGNHHRFITEKRVFSSWAQLYGITFS 328
Query: 296 HPSW 299
HPSW
Sbjct: 329 HPSW 332
>gi|229892275 sialyltransferase 7C isoform 2 [Homo sapiens]
Length = 210
Score = 149 bits (376), Expect = 3e-36
Identities = 70/146 (47%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query: 58 GYSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQ 117
GY +V +PL + C CA+VS+SGQM+G +G EID + C++RMN APT G+E DVG+
Sbjct: 63 GYINVKTQEPLQLD-CDLCAIVSNSGQMVGQKVGNEIDRSSCIWRMNNAPTKGYEEDVGR 121
Query: 118 RSTLRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLGGRTYRTLLQLTRMYP 177
+ +RVVSHTSVPLLL+N ++F++A T+Y++WG R+M + G Y L + +YP
Sbjct: 122 MTMIRVVSHTSVPLLLKNPDYFFKEANTTIYVIWGPFRNMRKDGNGIVYNMLKKTVGIYP 181
Query: 178 GLQVYTFTERMMAYCDQIFQDETGKN 203
Q+Y TE+ M+YCD +F+ ETGK+
Sbjct: 182 NAQIYVTTEKRMSYCDGVFKKETGKD 207
>gi|5902082 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Homo
sapiens]
Length = 350
Score = 85.1 bits (209), Expect = 7e-17
Identities = 67/203 (33%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 59 YSSVPDGKPL-VREP--CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADV 115
+ VP P R+P CR CAVV +SG + GSG G ++D + RMNQAPTVGFE DV
Sbjct: 132 FQIVPGENPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDV 191
Query: 116 GQRSTLRVVSHTSVPLLLRNYSHYFQ--KARDTLYMVWGQGRHMDRVLGGRTYRTLLQLT 173
G R+T + S L N S K D L++ R TY +
Sbjct: 192 GSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQIRF----TYAPVKSFL 247
Query: 174 RMYPGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGM 233
R+ E++ Y F+ + G + STG + AL +C+E+ VYG
Sbjct: 248 RV--------DKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGF 299
Query: 234 VSDSYCREKSHPSVPYHYFEKGR 256
+DS R H HY+E R
Sbjct: 300 GADS--RGNWH-----HYWENNR 315
>gi|27765096 ST3 beta-galactoside alpha-2,3-sialyltransferase 1
[Homo sapiens]
Length = 340
Score = 75.5 bits (184), Expect = 5e-14
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR CAVV +SG + S G EIDS + V RMN+APT GFEADVG ++T +V
Sbjct: 139 CRRCAVVGNSGNLRESSYGPEIDSHDFVLRMNKAPTAGFEADVGTKTTHHLV-------- 190
Query: 133 LRNYSHYFQKARDTLYMVWGQGRHMDR--VLGGRTYRTLLQLTRMYPGLQVYTFTERMMA 190
Y F++ D + M+ + +D V+ T T+ P ++ ++++
Sbjct: 191 ---YPESFRELGDNVSMILVPFKTIDLEWVVSAITTGTISHTYIPVPA-KIRVKQDKILI 246
Query: 191 YCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
Y + + G + STG ++I ++ +C+E+ +YG +DS
Sbjct: 247 YHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVDLYGFGADS 293
>gi|4506951 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Homo
sapiens]
Length = 340
Score = 75.5 bits (184), Expect = 5e-14
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR CAVV +SG + S G EIDS + V RMN+APT GFEADVG ++T +V
Sbjct: 139 CRRCAVVGNSGNLRESSYGPEIDSHDFVLRMNKAPTAGFEADVGTKTTHHLV-------- 190
Query: 133 LRNYSHYFQKARDTLYMVWGQGRHMDR--VLGGRTYRTLLQLTRMYPGLQVYTFTERMMA 190
Y F++ D + M+ + +D V+ T T+ P ++ ++++
Sbjct: 191 ---YPESFRELGDNVSMILVPFKTIDLEWVVSAITTGTISHTYIPVPA-KIRVKQDKILI 246
Query: 191 YCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
Y + + G + STG ++I ++ +C+E+ +YG +DS
Sbjct: 247 YHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVDLYGFGADS 293
>gi|215272345 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
isoform a [Homo sapiens]
Length = 529
Score = 75.1 bits (183), Expect = 7e-14
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 74 RSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLLL 133
RSCAVV S+G +L S LG EIDS + V R N APT G+E DVG ++T+R+++ +L
Sbjct: 294 RSCAVVMSAGAILNSSLGEEIDSHDAVLRFNSAPTRGYEKDVGNKTTIRIINSQ----IL 349
Query: 134 RNYSHYFQKA---RDTLYMVWGQGRHMDRV------LGGRTYRTLLQLTRMYPGLQVYTF 184
N SH+F + +D + + W + + + +Q + P Y
Sbjct: 350 TNPSHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYIQHRQRNPNQPFYIL 409
Query: 185 TERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCREKSH 244
+ + I Q+ T + + + S+G+ +++ + +C E+ VY + E H
Sbjct: 410 HPKFIWQLWDIIQENTKEKIQPNPP--SSGFIGILIMMSMCREVHVYEYIPSVRQTELCH 467
>gi|26190610 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
isoform a [Homo sapiens]
Length = 529
Score = 75.1 bits (183), Expect = 7e-14
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 74 RSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLLL 133
RSCAVV S+G +L S LG EIDS + V R N APT G+E DVG ++T+R+++ +L
Sbjct: 294 RSCAVVMSAGAILNSSLGEEIDSHDAVLRFNSAPTRGYEKDVGNKTTIRIINSQ----IL 349
Query: 134 RNYSHYFQKA---RDTLYMVWGQGRHMDRV------LGGRTYRTLLQLTRMYPGLQVYTF 184
N SH+F + +D + + W + + + +Q + P Y
Sbjct: 350 TNPSHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYIQHRQRNPNQPFYIL 409
Query: 185 TERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDSYCREKSH 244
+ + I Q+ T + + + S+G+ +++ + +C E+ VY + E H
Sbjct: 410 HPKFIWQLWDIIQENTKEKIQPNPP--SSGFIGILIMMSMCREVHVYEYIPSVRQTELCH 467
>gi|110815855 ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 3 [Homo sapiens]
Length = 380
Score = 74.3 bits (181), Expect = 1e-13
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 60 SSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRS 119
S +PD P++ + CAVV +SG + GS G EID ++ VFR N APT F+ DVG+++
Sbjct: 146 SLLPDVSPIMNKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTEAFQRDVGRKT 205
Query: 120 TLRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVL---------GGRTYRTLL 170
L T P +L Y + +D + +L RTL+
Sbjct: 206 NLT----TFNPSILEKYYNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLV 261
Query: 171 QLTRMYPG-LQVYTFTERMMAYCDQIFQ--DETGKNRRQSGSFLSTGWFTMILALELCEE 227
+ G L+V +A+ I Q + KN+ S LSTG LA +CEE
Sbjct: 262 DFFVEHRGQLKV------QLAWPGNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEE 315
Query: 228 IVVYGMVSDSYCREKSHPSVPYHYFEK 254
I +YG + + +PYHY++K
Sbjct: 316 IHLYGFWPFGF-DPNTREDLPYHYYDK 341
>gi|215272347 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
isoform b [Homo sapiens]
Length = 466
Score = 70.1 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 74 RSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLLL 133
RSCAVV S+G +L S LG EIDS + V R N APT G+E DVG ++T+R+++ +L
Sbjct: 294 RSCAVVMSAGAILNSSLGEEIDSHDAVLRFNSAPTRGYEKDVGNKTTIRIINSQ----IL 349
Query: 134 RNYSHYFQKA---RDTLYMVW 151
N SH+F + +D + + W
Sbjct: 350 TNPSHHFIDSSLYKDVILVAW 370
>gi|5031999 ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 4 isoform a [Homo sapiens]
Length = 359
Score = 65.1 bits (157), Expect = 7e-11
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 59 YSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQR 118
+S +P+ P+ ++CAVV +SG +L S G EIDS V R N AP V F ADVG +
Sbjct: 125 HSLLPEVSPMKNRRFKTCAVVGNSGILLDSECGKEIDSHNFVIRCNLAPVVEFAADVGTK 184
Query: 119 STLRVVSHTSVPLL---LRNYS------HYFQKARDTL-----YMVWGQGRHMDRVLGGR 164
S ++ + V RN S H D++ +MV G +H++ V
Sbjct: 185 SDFITMNPSVVQRAFGGFRNESDREKFVHRLSMLNDSVLWIPAFMVKGGEKHVEWV-NAL 243
Query: 165 TYRTLLQLTRMYPGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALEL 224
+ L++ YP L++ + A ++ R STG LA
Sbjct: 244 ILKNKLKVRTAYPSLRL------IHAVRGYWLTNKVPIKRP------STGLLMYTLATRF 291
Query: 225 CEEIVVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYLAHEQAPRSAHRFITEKAVFS 284
C+EI +YG + ++ + +V YHY++ D Y ++ R F T + +
Sbjct: 292 CDEIHLYGFW--PFPKDLNGKAVKYHYYD----DLKYRYFSNASPHRMPLEFKTLNVLHN 345
Query: 285 RWAKK 289
R A K
Sbjct: 346 RGALK 350
>gi|28373086 sialyltransferase 6 isoform i [Homo sapiens]
Length = 413
Score = 59.7 bits (143), Expect = 3e-09
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 30/200 (15%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR C +V + G + LG+ ID + V R+N AP GFE DVG ++TLR+
Sbjct: 195 CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQR 254
Query: 133 LRNYSHYFQKARDTLYMV----WGQGRHMDRVL--------GGRTYRTLLQLTRMYPGLQ 180
Y RD+L+++ W + + ++ G ++ + P ++
Sbjct: 255 PEQYE------RDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIR 308
Query: 181 V---YTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
+ Y E F + G+ + G + +AL C+E+ V G D
Sbjct: 309 ILNPYFIQEAAFTLIGLPFNN----GLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYD- 363
Query: 238 YCREKSHPSVPYHYFEKGRL 257
S P+ P HY+E R+
Sbjct: 364 ----MSTPNAPLHYYETVRM 379
>gi|28373082 sialyltransferase 6 isoform g [Homo sapiens]
Length = 359
Score = 59.7 bits (143), Expect = 3e-09
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 30/200 (15%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR C +V + G + LG+ ID + V R+N AP GFE DVG ++TLR+
Sbjct: 141 CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQR 200
Query: 133 LRNYSHYFQKARDTLYMV----WGQGRHMDRVL--------GGRTYRTLLQLTRMYPGLQ 180
Y RD+L+++ W + + ++ G ++ + P ++
Sbjct: 201 PEQYE------RDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIR 254
Query: 181 V---YTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
+ Y E F + G+ + G + +AL C+E+ V G D
Sbjct: 255 ILNPYFIQEAAFTLIGLPFNN----GLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYD- 309
Query: 238 YCREKSHPSVPYHYFEKGRL 257
S P+ P HY+E R+
Sbjct: 310 ----MSTPNAPLHYYETVRM 325
>gi|28373078 sialyltransferase 6 isoform f [Homo sapiens]
Length = 429
Score = 59.7 bits (143), Expect = 3e-09
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 30/200 (15%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR C +V + G + LG+ ID + V R+N AP GFE DVG ++TLR+
Sbjct: 211 CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQR 270
Query: 133 LRNYSHYFQKARDTLYMV----WGQGRHMDRVL--------GGRTYRTLLQLTRMYPGLQ 180
Y RD+L+++ W + + ++ G ++ + P ++
Sbjct: 271 PEQYE------RDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIR 324
Query: 181 V---YTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
+ Y E F + G+ + G + +AL C+E+ V G D
Sbjct: 325 ILNPYFIQEAAFTLIGLPFNN----GLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYD- 379
Query: 238 YCREKSHPSVPYHYFEKGRL 257
S P+ P HY+E R+
Sbjct: 380 ----MSTPNAPLHYYETVRM 395
>gi|28373070 sialyltransferase 6 isoform b [Homo sapiens]
Length = 390
Score = 59.7 bits (143), Expect = 3e-09
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 30/200 (15%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR C +V + G + LG+ ID + V R+N AP GFE DVG ++TLR+
Sbjct: 172 CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQR 231
Query: 133 LRNYSHYFQKARDTLYMV----WGQGRHMDRVL--------GGRTYRTLLQLTRMYPGLQ 180
Y RD+L+++ W + + ++ G ++ + P ++
Sbjct: 232 PEQYE------RDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIR 285
Query: 181 V---YTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
+ Y E F + G+ + G + +AL C+E+ V G D
Sbjct: 286 ILNPYFIQEAAFTLIGLPFNN----GLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYD- 340
Query: 238 YCREKSHPSVPYHYFEKGRL 257
S P+ P HY+E R+
Sbjct: 341 ----MSTPNAPLHYYETVRM 356
>gi|28373068 sialyltransferase 6 isoform a [Homo sapiens]
Length = 444
Score = 59.7 bits (143), Expect = 3e-09
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 30/200 (15%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR C +V + G + LG+ ID + V R+N AP GFE DVG ++TLR+
Sbjct: 226 CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQR 285
Query: 133 LRNYSHYFQKARDTLYMV----WGQGRHMDRVL--------GGRTYRTLLQLTRMYPGLQ 180
Y RD+L+++ W + + ++ G ++ + P ++
Sbjct: 286 PEQYE------RDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIR 339
Query: 181 V---YTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
+ Y E F + G+ + G + +AL C+E+ V G D
Sbjct: 340 ILNPYFIQEAAFTLIGLPFNN----GLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYD- 394
Query: 238 YCREKSHPSVPYHYFEKGRL 257
S P+ P HY+E R+
Sbjct: 395 ----MSTPNAPLHYYETVRM 410
>gi|5454060 sialyltransferase 6 isoform j [Homo sapiens]
Length = 375
Score = 59.7 bits (143), Expect = 3e-09
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 30/200 (15%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
CR C +V + G + LG+ ID + V R+N AP GFE DVG ++TLR+
Sbjct: 157 CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQR 216
Query: 133 LRNYSHYFQKARDTLYMV----WGQGRHMDRVL--------GGRTYRTLLQLTRMYPGLQ 180
Y RD+L+++ W + + ++ G ++ + P ++
Sbjct: 217 PEQYE------RDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIR 270
Query: 181 V---YTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMVSDS 237
+ Y E F + G+ + G + +AL C+E+ V G D
Sbjct: 271 ILNPYFIQEAAFTLIGLPFNN----GLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYD- 325
Query: 238 YCREKSHPSVPYHYFEKGRL 257
S P+ P HY+E R+
Sbjct: 326 ----MSTPNAPLHYYETVRM 341
>gi|4506949 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
isoform a [Homo sapiens]
Length = 406
Score = 58.9 bits (141), Expect = 5e-09
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 72 PCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPL 131
P CAVVSS+G + S LG EID + V R N APT F+ DVG ++T+R+++ V
Sbjct: 180 PWGRCAVVSSAGSLKSSQLGREIDDHDAVLRFNGAPTANFQQDVGTKTTIRLMNSQLVTT 239
Query: 132 LLRNYSHYFQKARDTLY-----------------MVWGQGRHMDRVLGGRTYRTLLQLTR 174
R +D+LY W Q + +TYR +
Sbjct: 240 EKR-------FLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYR------K 286
Query: 175 MYPGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMV 234
++P Y +M I Q+ + + + + S+G +I+ + LC+++ +Y
Sbjct: 287 LHPNQPFYILKPQMPWELWDILQEISPEEIQPNPP--SSGMLGIIIMMTLCDQVDIY--- 341
Query: 235 SDSYCREKSHPSVPYHY 251
+ K V Y+Y
Sbjct: 342 --EFLPSKRKTDVCYYY 356
>gi|27765091 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
isoform a [Homo sapiens]
Length = 406
Score = 58.9 bits (141), Expect = 5e-09
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 72 PCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPL 131
P CAVVSS+G + S LG EID + V R N APT F+ DVG ++T+R+++ V
Sbjct: 180 PWGRCAVVSSAGSLKSSQLGREIDDHDAVLRFNGAPTANFQQDVGTKTTIRLMNSQLVTT 239
Query: 132 LLRNYSHYFQKARDTLY-----------------MVWGQGRHMDRVLGGRTYRTLLQLTR 174
R +D+LY W Q + +TYR +
Sbjct: 240 EKR-------FLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYR------K 286
Query: 175 MYPGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGMV 234
++P Y +M I Q+ + + + + S+G +I+ + LC+++ +Y
Sbjct: 287 LHPNQPFYILKPQMPWELWDILQEISPEEIQPNPP--SSGMLGIIIMMTLCDQVDIY--- 341
Query: 235 SDSYCREKSHPSVPYHY 251
+ K V Y+Y
Sbjct: 342 --EFLPSKRKTDVCYYY 356
>gi|4506953 alpha-2,8-sialyltransferase 1 [Homo sapiens]
Length = 356
Score = 58.2 bits (139), Expect = 9e-09
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 57 SGYSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAP-TVGFEADV 115
S YS P P + P + CAVV + G + SG G +ID A V R N P + + DV
Sbjct: 120 STYSLFPQATPF-QLPLKKCAVVGNGGILKKSGCGRQIDEANFVMRCNLPPLSSEYTKDV 178
Query: 116 GQRSTLRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRV-LGGRTY---RTLLQ 171
G +S L T+ P ++R FQ ++W + +D + + +Y
Sbjct: 179 GSKSQL----VTANPSIIR---QRFQN------LLWSRKTFVDNMKIYNHSYIYMPAFSM 225
Query: 172 LTRMYPGLQVY-----TFTERMMAYCDQIFQDETGKNRRQSG---SFLSTGWFTMILALE 223
T P L+VY + + + + F GK + G LSTG F + AL
Sbjct: 226 KTGTEPSLRVYYTLSDVGANQTVLFANPNFLRSIGKFWKSRGIHAKRLSTGLFLVSAALG 285
Query: 224 LCEEIVVYGMVSDSYCREKSHPSVPYHYFE 253
LCEE+ +YG S + +HY++
Sbjct: 286 LCEEVAIYGFWPFSV--NMHEQPISHHYYD 313
>gi|28373074 sialyltransferase 6 isoform d [Homo sapiens]
Length = 277
Score = 55.1 bits (131), Expect = 8e-08
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRV 123
CR C +V + G + LG+ ID + V R+N AP GFE DVG ++TLR+
Sbjct: 157 CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRI 207
>gi|5174697 alpha2,3-sialyltransferase VI [Homo sapiens]
Length = 331
Score = 54.3 bits (129), Expect = 1e-07
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 72 PCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSV 129
PC+ C VV + G + LG +IDS + + RMN P +G E +VG+R+T R+ SV
Sbjct: 114 PCKKCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESV 171
>gi|21264332 sialyltransferase 7A [Homo sapiens]
Length = 600
Score = 53.5 bits (127), Expect = 2e-07
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 29/196 (14%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRST---LRVVSHTSV 129
C +CAVV + G + S +G EIDS + VFR++ A G+E DVG R++ S T
Sbjct: 362 CITCAVVGNGGILNNSHMGQEIDSHDYVFRLSGALIKGYEQDVGTRTSFYGFTAFSLTQS 421
Query: 130 PLLLRN-------------YSHYFQKARDTLYM--------VWGQGRHMDRVLGGRTYRT 168
L+L N Y H+ + RD ++ V + R +R
Sbjct: 422 LLILGNRGFKNVPLGKDVRYLHFLEGTRDYEWLEALLMNQTVMSKNLFWFRHRPQEAFRE 481
Query: 169 LLQLTRMYPGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEI 228
L + R L ++ R M ++ + +T +TG ++ AL+LC+++
Sbjct: 482 ALHMDRY---LLLHPDFLRYMK--NRFLRSKTLDGAHWRIYRPTTGALLLLTALQLCDQV 536
Query: 229 VVYGMVSDSYCREKSH 244
YG +++ + R H
Sbjct: 537 SAYGFITEGHERFSDH 552
>gi|54234057 ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 6 [Homo sapiens]
Length = 398
Score = 52.4 bits (124), Expect = 5e-07
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 53 PLHFSGYSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVG-F 111
P+ + + P +P V P CAVV + G + S G EID ++ VFR N PT G
Sbjct: 163 PIKKNIFHMFPVSQPFVDYPYNQCAVVGNGGILNKSLCGTEIDKSDFVFRCNLPPTTGDV 222
Query: 112 EADVGQRSTLRVVSHTSVPLLLRNYSHYFQKARDTLYM----VWGQGRHMDRVLGGRTYR 167
DVG ++ L ++ + + L N K + L++ +G + L ++R
Sbjct: 223 SKDVGSKTNLVTINPSIITLKYGNL-----KEKKALFLEDIATYGDAFFL---LPAFSFR 274
Query: 168 TLLQLT-RMYPGLQVYTFTERMMAYCDQIFQDET--GKNRRQSGSFLSTGWFTMILALEL 224
+ ++Y L+ ++++ + + +D + + + LSTG +A+EL
Sbjct: 275 ANTGTSFKVYYTLEESKARQKVLFFHPKYLKDLALFWRTKGVTAYRLSTGLMITSVAVEL 334
Query: 225 CEEIVVYGMVSDSYCREKSHPSVPYHYFE 253
C+ + +YG + + V +HY++
Sbjct: 335 CKNVKLYGFW--PFSKTVEDIPVSHHYYD 361
>gi|5454058 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Homo
sapiens]
Length = 329
Score = 52.0 bits (123), Expect = 6e-07
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 60 SSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRS 119
SS+P +R CR C VV + ++ S LG I+ + V R+N AP G+E DVG ++
Sbjct: 102 SSIPKNIQSLR--CRRCVVVGNGHRLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKT 159
Query: 120 TLRV 123
T+R+
Sbjct: 160 TMRL 163
>gi|28373101 ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 5 [Homo sapiens]
Length = 376
Score = 51.6 bits (122), Expect = 8e-07
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 63 PDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAP-TVGFEADVGQRSTL 121
P P R + CAVV + G + S G EI+SA+ VFR N P + + DVG ++ +
Sbjct: 151 PKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRCNLPPISEKYTMDVGVKTDV 210
Query: 122 RVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRVLGG--RTYRTLLQLTRMY--- 176
V+ P ++ H +K R Y V + +L T T + + Y
Sbjct: 211 VTVN----PSIITERFHKLEKWRRPFYRVLQVYENASVLLPAFYNTRNTDVSIRVKYVLD 266
Query: 177 ---PGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTMILALELCEEIVVYGM 233
VY F + + + + + +R +STG + ALELCEE+ ++G
Sbjct: 267 DFESPQAVYYFHPQYLVNVSRYWLSLGVRAKR-----ISTGLILVTAALELCEEVHLFGF 321
Query: 234 VSDSYCREKSHPSVPYHYFE 253
++ S + +HY++
Sbjct: 322 W--AFPMNPSGLYITHHYYD 339
>gi|192448440 sialyltransferase 7B [Homo sapiens]
Length = 374
Score = 50.1 bits (118), Expect = 2e-06
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 52/232 (22%)
Query: 73 CRSCAVVSSSGQMLGSGLGAEIDSAECVFRMNQAPTVGFEADVGQRSTLRVVSHTSVPLL 132
C CAVV + G + GS G ID+ + VFR+N A GFE DVG +++
Sbjct: 148 CIRCAVVGNGGILNGSRQGPNIDAHDYVFRLNGAVIKGFERDVGTKTSF----------- 196
Query: 133 LRNYSHYFQKARDTLYMVWG-------QGRHMDRVLGGRTYRTLLQLTRMYPGLQVYTFT 185
Y +++L W QG+ + + R + L G+ V
Sbjct: 197 ---YGFTVNTMKNSLVSYWNLGFTSVPQGQDLQYIFIPSDIRDYVMLRSAILGVPVPEGL 253
Query: 186 ER-----------------------MMAYCDQIFQDETGKNRRQSGSFL-STGWFTMILA 221
++ ++Y + F N ++ STG ++ A
Sbjct: 254 DKGDRPHAYFGPEASASKFKLLHPDFISYLTERFLKSKLINTHFGDLYMPSTGALMLLTA 313
Query: 222 LELCEEIVVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYLAHEQAPRSA 273
L C+++ YG ++ +Y + HYFE+ ++ Y H+ + +A
Sbjct: 314 LHTCDQVSAYGFITSNYWKFSD------HYFER-KMKPLIFYANHDLSLEAA 358
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,451,836
Number of Sequences: 37866
Number of extensions: 582276
Number of successful extensions: 1725
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1652
Number of HSP's gapped (non-prelim): 64
length of query: 302
length of database: 18,247,518
effective HSP length: 102
effective length of query: 200
effective length of database: 14,385,186
effective search space: 2877037200
effective search space used: 2877037200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.