Search of human proteins with 27312029

Search of human proteins with 27312029

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27312029 hypothetical protein LOC145376 [Homo sapiens]
         (422 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27312029 hypothetical protein LOC145376 [Homo sapiens]             862   0.0  
gi|221316707 NADPH dependent diflavin oxidoreductase 1 isoform d...    33   0.37 
gi|221316709 NADPH dependent diflavin oxidoreductase 1 isoform c...    33   0.37 
gi|221316705 NADPH dependent diflavin oxidoreductase 1 isoform a...    33   0.37 
gi|7657393 NADPH dependent diflavin oxidoreductase 1 isoform b [...    33   0.37 
gi|94818781 DENN/MADD domain containing 4C [Homo sapiens]              32   0.83 
gi|33359680 ephrin A1 isoform b precursor [Homo sapiens]               30   3.2  
gi|157671949 rearranged L-myc fusion [Homo sapiens]                    30   3.2  
gi|21359945 chromosome condensation protein G [Homo sapiens]           30   4.1  
gi|45446749 kinesin family member 5A [Homo sapiens]                    30   4.1  
gi|21264343 scaffold attachment factor B [Homo sapiens]                30   5.4  
gi|24308211 integrator complex subunit 2 [Homo sapiens]                29   7.0  

>gi|27312029 hypothetical protein LOC145376 [Homo sapiens]
          Length = 422

 Score =  862 bits (2227), Expect = 0.0
 Identities = 422/422 (100%), Positives = 422/422 (100%)

Query: 1   MYRVPEFYARRKRLGGQTPYLMDQLGLRLGMWYWKDETRTLEFRRFAAEDSVQWLLKHHP 60
           MYRVPEFYARRKRLGGQTPYLMDQLGLRLGMWYWKDETRTLEFRRFAAEDSVQWLLKHHP
Sbjct: 1   MYRVPEFYARRKRLGGQTPYLMDQLGLRLGMWYWKDETRTLEFRRFAAEDSVQWLLKHHP 60

Query: 61  HFTPAAEVKEKGKKGKAVHFAETDGPASDRLTDKRLAAKDDKSAKAVEKRGQQGTITLDD 120
           HFTPAAEVKEKGKKGKAVHFAETDGPASDRLTDKRLAAKDDKSAKAVEKRGQQGTITLDD
Sbjct: 61  HFTPAAEVKEKGKKGKAVHFAETDGPASDRLTDKRLAAKDDKSAKAVEKRGQQGTITLDD 120

Query: 121 VKFVTLLLLQDTEMQRICSFTTFMRNKNLDNFLMALLYYLSHYLEKNSLEKKPKSYMVGL 180
           VKFVTLLLLQDTEMQRICSFTTFMRNKNLDNFLMALLYYLSHYLEKNSLEKKPKSYMVGL
Sbjct: 121 VKFVTLLLLQDTEMQRICSFTTFMRNKNLDNFLMALLYYLSHYLEKNSLEKKPKSYMVGL 180

Query: 181 VEKKEMELVLSELEAAQRYLAQKYCILVLGLAVPDKHHMCCGKEKISDTQKDWKFFESFY 240
           VEKKEMELVLSELEAAQRYLAQKYCILVLGLAVPDKHHMCCGKEKISDTQKDWKFFESFY
Sbjct: 181 VEKKEMELVLSELEAAQRYLAQKYCILVLGLAVPDKHHMCCGKEKISDTQKDWKFFESFY 240

Query: 241 TFCTYVAWIVFRRQHLTEIEEEVGRLFRTNMFNIPRRRREDEESGGEKKRMTFVQFRRMM 300
           TFCTYVAWIVFRRQHLTEIEEEVGRLFRTNMFNIPRRRREDEESGGEKKRMTFVQFRRMM
Sbjct: 241 TFCTYVAWIVFRRQHLTEIEEEVGRLFRTNMFNIPRRRREDEESGGEKKRMTFVQFRRMM 300

Query: 301 AKRPAIKKAINMRSPVMSTLLPSLREKAQNVFEKKYHQVDVRFPAEMQKHVGTLDSVPMP 360
           AKRPAIKKAINMRSPVMSTLLPSLREKAQNVFEKKYHQVDVRFPAEMQKHVGTLDSVPMP
Sbjct: 301 AKRPAIKKAINMRSPVMSTLLPSLREKAQNVFEKKYHQVDVRFPAEMQKHVGTLDSVPMP 360

Query: 361 VVGILGEPRCLFNPHTLHPLDPEENTKSFGRYPSLMENNNMRIQDTLDLVMKTLSSHTSC 420
           VVGILGEPRCLFNPHTLHPLDPEENTKSFGRYPSLMENNNMRIQDTLDLVMKTLSSHTSC
Sbjct: 361 VVGILGEPRCLFNPHTLHPLDPEENTKSFGRYPSLMENNNMRIQDTLDLVMKTLSSHTSC 420

Query: 421 PK 422
           PK
Sbjct: 421 PK 422


>gi|221316707 NADPH dependent diflavin oxidoreductase 1 isoform d
           [Homo sapiens]
          Length = 521

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 312 MRSPVMSTLLPSLREKAQNVFEKKYHQVDVRFPAEMQKHVGTLDSVPMPVVGILGEPRCL 371
           M SP +  L  S    AQ+V E+   +   R    +   V  LDS P  VV ++ EP  +
Sbjct: 1   MPSPQLLVLFGSQTGTAQDVSERLGREARRR---RLGCRVQALDSYP--VVNLINEPLVI 55

Query: 372 FNPHTLHPLDPEENTKSFGRY 392
           F   T    DP +N K+F R+
Sbjct: 56  FVCATTGQGDPPDNMKNFWRF 76


>gi|221316709 NADPH dependent diflavin oxidoreductase 1 isoform c
           [Homo sapiens]
          Length = 590

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 312 MRSPVMSTLLPSLREKAQNVFEKKYHQVDVRFPAEMQKHVGTLDSVPMPVVGILGEPRCL 371
           M SP +  L  S    AQ+V E+   +   R    +   V  LDS P  VV ++ EP  +
Sbjct: 1   MPSPQLLVLFGSQTGTAQDVSERLGREARRR---RLGCRVQALDSYP--VVNLINEPLVI 55

Query: 372 FNPHTLHPLDPEENTKSFGRY 392
           F   T    DP +N K+F R+
Sbjct: 56  FVCATTGQGDPPDNMKNFWRF 76


>gi|221316705 NADPH dependent diflavin oxidoreductase 1 isoform a
           [Homo sapiens]
          Length = 606

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 312 MRSPVMSTLLPSLREKAQNVFEKKYHQVDVRFPAEMQKHVGTLDSVPMPVVGILGEPRCL 371
           M SP +  L  S    AQ+V E+   +   R    +   V  LDS P  VV ++ EP  +
Sbjct: 1   MPSPQLLVLFGSQTGTAQDVSERLGREARRR---RLGCRVQALDSYP--VVNLINEPLVI 55

Query: 372 FNPHTLHPLDPEENTKSFGRY 392
           F   T    DP +N K+F R+
Sbjct: 56  FVCATTGQGDPPDNMKNFWRF 76


>gi|7657393 NADPH dependent diflavin oxidoreductase 1 isoform b
           [Homo sapiens]
          Length = 597

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 312 MRSPVMSTLLPSLREKAQNVFEKKYHQVDVRFPAEMQKHVGTLDSVPMPVVGILGEPRCL 371
           M SP +  L  S    AQ+V E+   +   R    +   V  LDS P  VV ++ EP  +
Sbjct: 1   MPSPQLLVLFGSQTGTAQDVSERLGREARRR---RLGCRVQALDSYP--VVNLINEPLVI 55

Query: 372 FNPHTLHPLDPEENTKSFGRY 392
           F   T    DP +N K+F R+
Sbjct: 56  FVCATTGQGDPPDNMKNFWRF 76


>gi|94818781 DENN/MADD domain containing 4C [Homo sapiens]
          Length = 1673

 Score = 32.3 bits (72), Expect = 0.83
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 177 MVGLVEKKEMELVLSELEAAQRYLAQKYCILVLGLAVPDKHHMCCGKEKISDTQK----- 231
           + G   KK     +   E   R L  +  ++ LGL  P +  M     K  +T K     
Sbjct: 24  LTGSSAKKVYGAAIQFYEPYSRELLSEKQLMHLGLLTPVERKMV---SKSINTNKCICLL 80

Query: 232 -DWKFFESFYTFCTYVAWIVFRRQHLTEIEEEVGRLFRTNMFNIPRRRR 279
             W FFE+F  F  ++  +     H   IE+ +    +   F  P+R R
Sbjct: 81  SHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPSPQRPR 129


>gi|33359680 ephrin A1 isoform b precursor [Homo sapiens]
          Length = 183

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 3/109 (2%)

Query: 20  YLMDQLGLRLGMWYWKDETRTLEFRRFAAEDSVQWLLKHHPHFTPAAEVKEKGKKGKAVH 79
           YL++    +L     KD+ R  +  R +A+   + L +    FTP    KE  K+G + +
Sbjct: 70  YLVEHEEYQLCQPQSKDQVRW-QCNRPSAKHGPEKLSEKFQRFTPFTLGKEF-KEGHSYY 127

Query: 80  FAETDGPASDRLTDKRLAAKDDKSAKAVEKRGQQGTITLDDVKFVTLLL 128
           +      A D   +KRLAA DD   + +   G      L  + +  LLL
Sbjct: 128 YISHSPQAHDNPQEKRLAA-DDPEVRVLHSIGHSAAPRLFPLAWTVLLL 175


>gi|157671949 rearranged L-myc fusion [Homo sapiens]
          Length = 1914

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 122 KFVTLLLLQDTEMQRICSFTTFMRNKNLDNFLMALLYYL 160
           K +  LL +D E++R C  T F+   +LD F M    YL
Sbjct: 396 KTIACLLPEDLEVRRACQLTEFLIEPSLDGFNMLEELYL 434


>gi|21359945 chromosome condensation protein G [Homo sapiens]
          Length = 1015

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 9/104 (8%)

Query: 235 FFESFYTFCTYVAWIVFRRQHLTEIEEEVGRLFRTNMFNIPRRRREDEESGGEKKRMTFV 294
           F E F  +  YV  +V++R+   E   E    F T+         E+EE GG    +   
Sbjct: 44  FHEEFIHYLKYVM-VVYKREPAVERVIEFAAKFVTSFHQSDMEDDEEEEDGG----LLNY 98

Query: 295 QFRRMMAKRPAIKKAINMR-SPVMSTLLPSLREKAQ---NVFEK 334
            F  ++    A   A+  R   +++ LL S+ E AQ   +VF+K
Sbjct: 99  LFTFLLKSHEANSNAVRFRVCLLINKLLGSMPENAQIDDDVFDK 142


>gi|45446749 kinesin family member 5A [Homo sapiens]
          Length = 1032

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 9/92 (9%)

Query: 79  HFAETDGPASDRLTD-----KRLAAKDDKSAKAVEKRGQQGTITLDDV--KFVTLLLLQD 131
           H    +  A D + +     + LA   D+ ++ VE++ QQ  + +D++  K  T+L L+ 
Sbjct: 472 HLQSENDAAKDEVKEVLQALEELAVNYDQKSQEVEEKSQQNQLLVDELSQKVATMLSLE- 530

Query: 132 TEMQRICSFTTFMRNKNLDNFLMALLYYLSHY 163
           +E+QR+   +   R K +   L  L+  LS +
Sbjct: 531 SELQRLQEVSGHQR-KRIAEVLNGLMKDLSEF 561


>gi|21264343 scaffold attachment factor B [Homo sapiens]
          Length = 915

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 249 IVFRRQHLTEIEEEVGRLFRTNMFNIPRRRREDEESGGEKKRMTFVQ-FRRMMAKRPAIK 307
           + F+RQ L     E  RL R  M     RRRE E    E++ +   Q  R    +RPA++
Sbjct: 652 LAFQRQRLERERMERERLERERMHVEHERRREQERIHREREELRRQQELRYEQERRPAVR 711

Query: 308 KAINM 312
           +  ++
Sbjct: 712 RPYDL 716


>gi|24308211 integrator complex subunit 2 [Homo sapiens]
          Length = 1204

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 9/75 (12%)

Query: 154 MALLYYLSHYLEK--------NSLEKKPKSYMVGLVEKKEMELVLSELEAAQRYLAQKYC 205
           + +LYY+  Y E          ++++KPKSY   L+++  ++ ++ + +  Q+ L   + 
Sbjct: 649 LLVLYYILSYEEALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQELGGLHS 708

Query: 206 ILVLGLAVPDKHHMC 220
            L L L   +  H+C
Sbjct: 709 AL-LRLLATNYPHLC 722


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,912,709
Number of Sequences: 37866
Number of extensions: 704103
Number of successful extensions: 1741
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1737
Number of HSP's gapped (non-prelim): 15
length of query: 422
length of database: 18,247,518
effective HSP length: 105
effective length of query: 317
effective length of database: 14,271,588
effective search space: 4524093396
effective search space used: 4524093396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.