Guide to the Human Genome
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Name: C14orf50 Sequence: fasta or formatted (422aa) NCBI GI: 27312029
Description:

hypothetical protein LOC145376

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         23           2
 C cysteine            1.7          7           2
 D aspartate           5.0         21           2
 E glutamate           7.8         33           3
 F phenylalanine       5.2         22           2
 G glycine             4.5         19           2
 H histidine           3.1         13           2
 I isoleucine          2.6         11           1
 K lysine              9.2         39           2
 L leucine            10.4         44           4
 M methionine          4.7         20           2
 N asparagine          3.1         13           3
 P proline             4.7         20           1
 Q glutamine           3.8         16           2
 R arginine            7.6         32           4
 S serine              4.7         20           2
 T threonine           5.9         25           2
 V valine              5.9         25           2
 W tryptophan          1.2          5           1
 Y tyrosine            3.3         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC145376 
NDOR1                 0.010   NADPH dependent diflavin oxidoreductase 1 isoform d...
NDOR1                 0.010   NADPH dependent diflavin oxidoreductase 1 isoform c...
NDOR1                 0.010   NADPH dependent diflavin oxidoreductase 1 isoform a...
NDOR1                 0.010   NADPH dependent diflavin oxidoreductase 1 isoform b [...
DENND4C               0.008   DENN/MADD domain containing 4C 
EFNA1                 0.006   ephrin A1 isoform b precursor 
RLF                   0.006   rearranged L-myc fusion 
NCAPG                 0.006   chromosome condensation protein G 
KIF5A                 0.006   kinesin family member 5A 
SAFB                  0.006   scaffold attachment factor B 
INTS2                 0.005   integrator complex subunit 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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