Search of human proteins with 25282391

Search of human proteins with 25282391

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25282391 nurim [Homo sapiens]
         (262 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25282391 nurim [Homo sapiens]                                      527   e-150
gi|239747120 PREDICTED: hypothetical protein XP_002343918 [Homo ...    31   0.96 
gi|239747111 PREDICTED: hypothetical protein XP_002343913 [Homo ...    31   0.96 
gi|217330592 LGP1 homolog isoform 2 [Homo sapiens]                     31   0.96 
gi|217416356 transmembrane protein 194B [Homo sapiens]                 30   2.1  
gi|189458812 glucan (1,4-alpha-), branching enzyme 1 [Homo sapiens]    30   2.8  
gi|229093087 G protein-coupled receptor 97 [Homo sapiens]              28   6.2  
gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens]     28   6.2  
gi|196123579 NADH dehydrogenase subunit 1 [Homo sapiens neandert...    28   8.1  
gi|251831107 NADH dehydrogenase subunit 1 [Homo sapiens]               28   8.1  
gi|14210490 LGP1 homolog isoform 1 [Homo sapiens]                      28   8.1  
gi|217330596 LGP1 homolog isoform 3 [Homo sapiens]                     28   8.1  
gi|148612887 choline transporter-like protein 4 [Homo sapiens]         28   8.1  

>gi|25282391 nurim [Homo sapiens]
          Length = 262

 Score =  527 bits (1357), Expect = e-150
 Identities = 262/262 (100%), Positives = 262/262 (100%)

Query: 1   MAPALLLIPAALASFILAFGTGVEFVRFTSLRPLLGGIPESGGPDARQGWLAALQDRSIL 60
           MAPALLLIPAALASFILAFGTGVEFVRFTSLRPLLGGIPESGGPDARQGWLAALQDRSIL
Sbjct: 1   MAPALLLIPAALASFILAFGTGVEFVRFTSLRPLLGGIPESGGPDARQGWLAALQDRSIL 60

Query: 61  APLAWDLGLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIP 120
           APLAWDLGLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIP
Sbjct: 61  APLAWDLGLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIP 120

Query: 121 KGPVLWEARAEPWATWVPLLCFVLHVISWLLIFSILLVFDYAELMGLKQVYYHVLGLGEP 180
           KGPVLWEARAEPWATWVPLLCFVLHVISWLLIFSILLVFDYAELMGLKQVYYHVLGLGEP
Sbjct: 121 KGPVLWEARAEPWATWVPLLCFVLHVISWLLIFSILLVFDYAELMGLKQVYYHVLGLGEP 180

Query: 181 LALKSPRALRLFSHLRHPVCVELLTVLWVVPTLGTDRLLLAFLLTLYLGLAHGLDQQDLR 240
           LALKSPRALRLFSHLRHPVCVELLTVLWVVPTLGTDRLLLAFLLTLYLGLAHGLDQQDLR
Sbjct: 181 LALKSPRALRLFSHLRHPVCVELLTVLWVVPTLGTDRLLLAFLLTLYLGLAHGLDQQDLR 240

Query: 241 YLRAQLQRKLHLLSRPQDGEAE 262
           YLRAQLQRKLHLLSRPQDGEAE
Sbjct: 241 YLRAQLQRKLHLLSRPQDGEAE 262


>gi|239747120 PREDICTED: hypothetical protein XP_002343918 [Homo
           sapiens]
          Length = 139

 Score = 31.2 bits (69), Expect = 0.96
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 117 EPIPKGPVLWEARAEPWATW 136
           +P P GP LW+ R +P A+W
Sbjct: 55  DPAPSGPGLWQQRTQPLASW 74


>gi|239747111 PREDICTED: hypothetical protein XP_002343913 [Homo
           sapiens]
          Length = 139

 Score = 31.2 bits (69), Expect = 0.96
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 117 EPIPKGPVLWEARAEPWATW 136
           +P P GP LW+ R +P A+W
Sbjct: 55  DPAPSGPGLWQQRTQPLASW 74


>gi|217330592 LGP1 homolog isoform 2 [Homo sapiens]
          Length = 491

 Score = 31.2 bits (69), Expect = 0.96
 Identities = 31/115 (26%), Positives = 39/115 (33%), Gaps = 7/115 (6%)

Query: 31  LRPLLGGIPESGGPDARQGWLAALQDRSILAPLAW-------DLGLLLLFVGQHSLMAAE 83
           L P L  + +    DAR  WLA LQ R     L W        L    L V Q    A  
Sbjct: 12  LLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALR 71

Query: 84  RVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIPKGPVLWEARAEPWATWVP 138
                  R    L+RS  ++     L L   Y E + +G         PW   +P
Sbjct: 72  WCLQGAQRPHCSLRRSTDISTFRNHLPLTKAYPEVLAQGRTARVTLTSPWPRPLP 126


>gi|217416356 transmembrane protein 194B [Homo sapiens]
          Length = 417

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 2/101 (1%)

Query: 66  DLGLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIPKGPVL 125
           D  L L+FV    L    R  + +  ++      L V  T + + L+++ +  IPK    
Sbjct: 151 DFKLFLVFVAGVFLFFYARTLSQSPTFYYSSGTVLGVLMTLVFVLLLVKRF--IPKYSTF 208

Query: 126 WEARAEPWATWVPLLCFVLHVISWLLIFSILLVFDYAELMG 166
           W      W   V ++C ++  + WL   + + V  Y  ++G
Sbjct: 209 WALMVGCWFASVYIVCQLMEDLKWLWYENRIYVLGYVLIVG 249


>gi|189458812 glucan (1,4-alpha-), branching enzyme 1 [Homo sapiens]
          Length = 702

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 17/105 (16%)

Query: 115 YWEPIPKGPV-LWEARAEPWATWVPLLCFVLHVISWLLIFSILLVFDYAELMGLKQVYYH 173
           Y+   P+G   LW++R   +++W  L   + ++  WL  +     FD     G+  + YH
Sbjct: 310 YFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYR----FDGFRFDGVTSMLYH 365

Query: 174 VLGLGEPLA------------LKSPRALRLFSHLRHPVCVELLTV 206
             G+G+  +              +   L L +HL H +C + +T+
Sbjct: 366 HHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITI 410


>gi|229093087 G protein-coupled receptor 97 [Homo sapiens]
          Length = 549

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)

Query: 164 LMGLKQVYYHVLGLGEPLALKSPRALRLFSHLRHPVCVELLTVLWVVPTLGT 215
           L+GL     HV  L EPL +       +FSH R P  + L  V W V T GT
Sbjct: 181 LVGLSVGQMHVTKLAEPLEI-------VFSHQRPPPNMTLTCVFWDV-TKGT 224


>gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens]
          Length = 402

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 11/115 (9%)

Query: 4   ALLLIPAALASFILAFGTGVEFVRFT----SLRPLLGGIPESGGPDARQGWLAALQDRSI 59
           A L + A LA+ +    +G+  +R      S RP     P + GPD+R+ W  A   RS 
Sbjct: 208 ASLGLVALLAALVCNTLSGLALLRARWRRRSRRP-----PPASGPDSRRRW-GAHGPRSA 261

Query: 60  LAPLAWDL-GLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVM 113
            A  A  +      F G  S  +A R +A      G L   + V+C   +  LV+
Sbjct: 262 SASSASSIASASTFFGGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVL 316


>gi|196123579 NADH dehydrogenase subunit 1 [Homo sapiens
           neanderthalensis]
          Length = 318

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 68  GLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIP 120
           GLL  F     L   E +K  TS        +LY+    LAL + +  W P+P
Sbjct: 44  GLLQPFADAMKLFTKEPLKPATSTI------TLYITAPTLALTIALLLWTPLP 90


>gi|251831107 NADH dehydrogenase subunit 1 [Homo sapiens]
          Length = 318

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 68  GLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIP 120
           GLL  F     L   E +K  TS        +LY+    LAL + +  W P+P
Sbjct: 44  GLLQPFADAMKLFTKEPLKPATSTI------TLYITAPTLALTIALLLWTPLP 90


>gi|14210490 LGP1 homolog isoform 1 [Homo sapiens]
          Length = 530

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 31 LRPLLGGIPESGGPDARQGWLAALQDRSILAPLAW 65
          L P L  + +    DAR  WLA LQ R     L W
Sbjct: 12 LLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVW 46


>gi|217330596 LGP1 homolog isoform 3 [Homo sapiens]
          Length = 474

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 31 LRPLLGGIPESGGPDARQGWLAALQDRSILAPLAW 65
          L P L  + +    DAR  WLA LQ R     L W
Sbjct: 12 LLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVW 46


>gi|148612887 choline transporter-like protein 4 [Homo sapiens]
          Length = 710

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)

Query: 47  RQGWLAALQDRSILAPLAWDLGLLLLFVGQHSLMAAERVKAWTSRYFGVLQRSLYVACTA 106
           ++ WLAAL    +LA L   L L+L+F+ Q   +A   +K  +     ++    Y   T 
Sbjct: 306 QETWLAAL---IVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLVTF 362

Query: 107 LALQLVMRYW 116
           + L + + YW
Sbjct: 363 VLLLICIAYW 372


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.143    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,115,587
Number of Sequences: 37866
Number of extensions: 438168
Number of successful extensions: 1194
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1184
Number of HSP's gapped (non-prelim): 17
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.