Search of human proteins with 24308213

Search of human proteins with 24308213

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24308213 serine incorporator 1 [Homo sapiens]
         (453 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24308213 serine incorporator 1 [Homo sapiens]                      928   0.0  
gi|39812106 tumor differentially expressed protein 1 [Homo sapiens]   555   e-158
gi|5803193 tumor differentially expressed protein 1 [Homo sapiens]    555   e-158
gi|71834872 tumor differentially expressed 2-like [Homo sapiens]      535   e-152
gi|30172548 developmentally regulated protein TPO1 [Homo sapiens]     292   5e-79
gi|75677608 serine incorporator 4 [Homo sapiens]                      104   1e-22
gi|148839292 ATPase type 13A3 [Homo sapiens]                           33   0.69 
gi|11641231 ectodysplasin A receptor precursor [Homo sapiens]          31   2.0  
gi|239747469 PREDICTED: hypothetical protein XP_002347541 [Homo ...    30   3.4  
gi|239741343 PREDICTED: hypothetical protein XP_002342179 [Homo ...    30   3.4  

>gi|24308213 serine incorporator 1 [Homo sapiens]
          Length = 453

 Score =  928 bits (2398), Expect = 0.0
 Identities = 453/453 (100%), Positives = 453/453 (100%)

Query: 1   MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPG 60
           MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPG
Sbjct: 1   MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPG 60

Query: 61  MEEQLNKIPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAA 120
           MEEQLNKIPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAA
Sbjct: 61  MEEQLNKIPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAA 120

Query: 121 VHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNE 180
           VHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNE
Sbjct: 121 VHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNE 180

Query: 181 SWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAFISVNMLLC 240
           SWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAFISVNMLLC
Sbjct: 181 SWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAFISVNMLLC 240

Query: 241 VGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLLSIIGYNTT 300
           VGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLLSIIGYNTT
Sbjct: 241 VGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLLSIIGYNTT 300

Query: 301 STVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQVNKLTLTSDESTLIEDGGAR 360
           STVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQVNKLTLTSDESTLIEDGGAR
Sbjct: 301 STVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQVNKLTLTSDESTLIEDGGAR 360

Query: 361 SDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPSREMKSQW 420
           SDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPSREMKSQW
Sbjct: 361 SDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPSREMKSQW 420

Query: 421 TAVWVKISSSWIGIVLYVWTLVAPLVLTNRDFD 453
           TAVWVKISSSWIGIVLYVWTLVAPLVLTNRDFD
Sbjct: 421 TAVWVKISSSWIGIVLYVWTLVAPLVLTNRDFD 453


>gi|39812106 tumor differentially expressed protein 1 [Homo sapiens]
          Length = 473

 Score =  555 bits (1429), Expect = e-158
 Identities = 279/473 (58%), Positives = 345/473 (72%), Gaps = 22/473 (4%)

Query: 1   MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPG 60
           MG+VLG+ S+ASW+PCLC  A CLLC CCP+  NSTVTRLIYA  LL+   V+ +M    
Sbjct: 1   MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60

Query: 61  MEEQLNKIPGFCENEKGV--------VPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVK 112
           ME  L KIPGFCE    +          C++LVGYKAVYR+ F +A+F+ + SLLM KVK
Sbjct: 61  METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120

Query: 113 SSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLI 172
           +S D RAAVHNGFWFFK AA I I++G+F+IP G F++VWF VGM GA  FILIQLVLL+
Sbjct: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180

Query: 173 DFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAF 232
           DFAHSWNESWV +MEEGN R WYAALLS T+  Y+LS++ + L + YYT P  C+ENK F
Sbjct: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240

Query: 233 ISVNMLLCVGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLL 292
           IS+N++LCV AS++SI PKIQE QPRSGLLQSS+IT+YTMYLTWSAM+NEP+ +CNP+L+
Sbjct: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300

Query: 293 SIIGY---------NTTSTVP---KEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQ 340
           S I           N+T+ VP      +S     +   IGL +F+LC+ YSSIRTS NSQ
Sbjct: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360

Query: 341 VNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYI 400
           V+KLTL+  +S ++ D         EDG    RAVDNE++GV YSYS FH ML LASLYI
Sbjct: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQP-RRAVDNEKEGVQYSYSLFHLMLCLASLYI 419

Query: 401 MMTLTNWYRYEPS-REMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
           MMTLT+WY  +   + M S+W AVWVKISSSW+ ++LYVWTLVAPLVLT+RDF
Sbjct: 420 MMTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDF 472


>gi|5803193 tumor differentially expressed protein 1 [Homo sapiens]
          Length = 473

 Score =  555 bits (1429), Expect = e-158
 Identities = 279/473 (58%), Positives = 345/473 (72%), Gaps = 22/473 (4%)

Query: 1   MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPG 60
           MG+VLG+ S+ASW+PCLC  A CLLC CCP+  NSTVTRLIYA  LL+   V+ +M    
Sbjct: 1   MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60

Query: 61  MEEQLNKIPGFCENEKGV--------VPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVK 112
           ME  L KIPGFCE    +          C++LVGYKAVYR+ F +A+F+ + SLLM KVK
Sbjct: 61  METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120

Query: 113 SSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLI 172
           +S D RAAVHNGFWFFK AA I I++G+F+IP G F++VWF VGM GA  FILIQLVLL+
Sbjct: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180

Query: 173 DFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAF 232
           DFAHSWNESWV +MEEGN R WYAALLS T+  Y+LS++ + L + YYT P  C+ENK F
Sbjct: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240

Query: 233 ISVNMLLCVGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLL 292
           IS+N++LCV AS++SI PKIQE QPRSGLLQSS+IT+YTMYLTWSAM+NEP+ +CNP+L+
Sbjct: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300

Query: 293 SIIGY---------NTTSTVP---KEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQ 340
           S I           N+T+ VP      +S     +   IGL +F+LC+ YSSIRTS NSQ
Sbjct: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360

Query: 341 VNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYI 400
           V+KLTL+  +S ++ D         EDG    RAVDNE++GV YSYS FH ML LASLYI
Sbjct: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQP-RRAVDNEKEGVQYSYSLFHLMLCLASLYI 419

Query: 401 MMTLTNWYRYEPS-REMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
           MMTLT+WY  +   + M S+W AVWVKISSSW+ ++LYVWTLVAPLVLT+RDF
Sbjct: 420 MMTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDF 472


>gi|71834872 tumor differentially expressed 2-like [Homo sapiens]
          Length = 455

 Score =  535 bits (1377), Expect = e-152
 Identities = 251/459 (54%), Positives = 329/459 (71%), Gaps = 12/459 (2%)

Query: 1   MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPG 60
           MG+ LG CS+ S   CLCGSAPC+LC CCP+  NSTV+RLI+  FL +GV V+ +ML PG
Sbjct: 1   MGACLGACSLLSCASCLCGSAPCILCSCCPASRNSTVSRLIFTFFLFLGVLVSIIMLSPG 60

Query: 61  MEEQLNKIPGFCENEKGV-------VPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKS 113
           +E QL K+P  CE   G+       + C  L+GY+AVYR+CF  A F+   +LLM+ V S
Sbjct: 61  VESQLYKLPWVCEEGAGIPTVLQGHIDCGSLLGYRAVYRMCFATAAFFFFFTLLMLCVSS 120

Query: 114 SSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLID 173
           S DPRAA+ NGFWFFKF   + + +GAF+IP+G+FT +WFY G+ G+F FILIQLVLLID
Sbjct: 121 SRDPRAAIQNGFWFFKFLILVGLTVGAFYIPDGSFTNIWFYFGVVGSFLFILIQLVLLID 180

Query: 174 FAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAFI 233
           FAHSWN+ W+ K EE +SR WYA L   T L YLLS+ A+ L F+YYT P+ C E K FI
Sbjct: 181 FAHSWNQRWLGKAEECDSRAWYAGLFFFTLLFYLLSIAAVALMFMYYTEPSGCHEGKVFI 240

Query: 234 SVNMLLCVGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLLS 293
           S+N+  CV  S+ ++LPK+Q++QP SGLLQ+SVIT+YTM++TWSA+++ PE  CNP L +
Sbjct: 241 SLNLTFCVCVSIAAVLPKVQDAQPNSGLLQASVITLYTMFVTWSALSSIPEQKCNPHLPT 300

Query: 294 IIGYNTTSTVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQVNKLTLTSDESTL 353
            +G N T     EG   QWW A  I+GLI+FLLC  + S+R+S++ QVN L  T +   +
Sbjct: 301 QLG-NETVVAGPEGYETQWWDAPSIVGLIIFLLCTLFISLRSSDHRQVNSLMQTEECPPM 359

Query: 354 IEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPS 413
           ++    +   +  +G    RA DNE+DGVTYSYSFFHF L LASL++MMTLTNWY+   +
Sbjct: 360 LDATQQQQQVAACEG----RAFDNEQDGVTYSYSFFHFCLVLASLHVMMTLTNWYKPGET 415

Query: 414 REMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
           R+M S WTAVWVKI +SW G++LY+WTLVAPL+L NRDF
Sbjct: 416 RKMISTWTAVWVKICASWAGLLLYLWTLVAPLLLRNRDF 454


>gi|30172548 developmentally regulated protein TPO1 [Homo sapiens]
          Length = 423

 Score =  292 bits (747), Expect = 5e-79
 Identities = 163/414 (39%), Positives = 234/414 (56%), Gaps = 20/414 (4%)

Query: 11  ASWIPCLCGSAPC-LLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPGMEEQLNK-I 68
           A  + C CGSA C L C CCP    S  TR +YAL+ ++ V + C+M+   +  ++ + I
Sbjct: 7   AGQLACCCGSAGCSLCCDCCPRIRQSLSTRFMYALYFILVVVLCCIMMSTTVAHKMKEHI 66

Query: 69  PGF---CENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGF 125
           P F   C+  K    C  LVGY AVYR+CFG+A F+ +  LL +K+ +S   RA +HNGF
Sbjct: 67  PFFEDMCKGIKAGDTCEKLVGYSAVYRVCFGMACFFFIFCLLTLKINNSKSCRAHIHNGF 126

Query: 126 WFFKFAAAIAIIIGAFFIPE-GTFTTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVE 184
           WFFK     A+  GAFFIP+  TF   W YVG  G F FI IQL+LL++FAH WN++W  
Sbjct: 127 WFFKLLLLGAMCSGAFFIPDQDTFLNAWRYVGAVGGFLFIGIQLLLLVEFAHKWNKNWTA 186

Query: 185 KMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAFISVNMLLCVGAS 244
                +++ WYA+L   T + Y ++   +VL  V+YT   SC ENK  + VN  LC+  S
Sbjct: 187 GT--ASNKLWYASLALVTLIMYSIATGGLVLMAVFYTQKDSCMENKILLGVNGGLCLLIS 244

Query: 245 VMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLLSIIGYNTTSTVP 304
           +++I P +Q  QP SGLLQS VI+ Y  YLT+SA++++P       +L   G N T  VP
Sbjct: 245 LVAISPWVQNRQPHSGLLQSGVISCYVTYLTFSALSSKPA----EVVLDEHGKNVTICVP 300

Query: 305 KEGQSV-QWWHAQGIIGLILFLLCVFYSSIRTSNNSQVNKL-------TLTSDESTLIED 356
             GQ + +  +   I+G  L + C+ YS + ++  S  + L        L          
Sbjct: 301 DFGQDLYRDENLVTILGTSLLIGCILYSCLTSTTRSSSDALQGRYAAPELEIARCCFCFS 360

Query: 357 GGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRY 410
            G       + G +  R + +E+ G  Y YS+FHF+ FLASLY+MMT+TNW+ +
Sbjct: 361 PGGEDTEEQQPGKEGPRVIYDEKKGTVYIYSYFHFVFFLASLYVMMTVTNWFNH 414


>gi|75677608 serine incorporator 4 [Homo sapiens]
          Length = 274

 Score =  104 bits (260), Expect = 1e-22
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 30/220 (13%)

Query: 249 LPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLLSIIGYNTTSTVP---- 304
           +P  +  QPRSGLLQ+SVI+ Y MYLT+SA+++ P     P  + + G N T  +P    
Sbjct: 32  IPGTRTEQPRSGLLQASVISCYIMYLTFSALSSRP-----PERVILQGQNHTLCLPGLSK 86

Query: 305 KEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQV-NKLTLTSDES------------ 351
            E Q+     +  ++   +   CV ++    S  ++V   L +    S            
Sbjct: 87  MEPQTPDI--SLAMLSASIMYACVLFACNEASYLAEVFGPLWIVKVYSYEFQKPSLCFCC 144

Query: 352 --TLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYR 409
             T+  D G R   +     +   A   +   ++Y+YS FHF+ FLASLY+M+TLTNW+ 
Sbjct: 145 PETVEADKGQRGGAARPADQETPPAPPVQVQHLSYNYSAFHFVFFLASLYVMVTLTNWFS 204

Query: 410 YEPSR----EMKSQWTAVWVKISSSWIGIVLYVWTLVAPL 445
           YE +      +K  W   WVK++S W  ++LY+  L+APL
Sbjct: 205 YEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLLLAPL 244


>gi|148839292 ATPase type 13A3 [Homo sapiens]
          Length = 1226

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 12/102 (11%)

Query: 118  RAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQL--VLLIDFA 175
            RAA+   F  FKF A  +II   +F    + T ++  +   G F F+ I L  +L++ F 
Sbjct: 929  RAALITSFCVFKFMALYSII--QYF----SVTLLYSILSNLGDFQFLFIDLAIILVVVFT 982

Query: 176  HSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFF 217
             S N +W E + +       + L+S   L  +LS + I + F
Sbjct: 983  MSLNPAWKELVAQRPP----SGLISGALLFSVLSQIIICIGF 1020


>gi|11641231 ectodysplasin A receptor precursor [Homo sapiens]
          Length = 448

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 8/91 (8%)

Query: 5  LGLCSMASWIPCLCGSAPCLL-CRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPGMEE 63
          +G C+   W+P L  S  C         G N    +         G+C  C    PG E 
Sbjct: 4  VGDCTQTPWLPVLVVSLMCSARAEYSNCGENEYYNQT-------TGLCQECPPCGPGEEP 56

Query: 64 QLNKIPGFCENEKGVVPCNILVGYKAVYRLC 94
           L+   G  + + G VPC      K  Y++C
Sbjct: 57 YLSCGYGTKDEDYGCVPCPAEKFSKGGYQIC 87


>gi|239747469 PREDICTED: hypothetical protein XP_002347541 [Homo
           sapiens]
          Length = 146

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 2   GSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPGM 61
           G  LGLC   S+ P LC   P L C          V ++IY + +    C+    L+  +
Sbjct: 67  GLALGLCECLSFFPDLC--PPLLQCFVSKEVAEDEVLKVIYFIII---TCLLHSHLLQAV 121

Query: 62  EEQLNKIP 69
            + ++KIP
Sbjct: 122 LQGIHKIP 129


>gi|239741343 PREDICTED: hypothetical protein XP_002342179 [Homo
           sapiens]
          Length = 146

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 2   GSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPGM 61
           G  LGLC   S+ P LC   P L C          V ++IY + +    C+    L+  +
Sbjct: 67  GLALGLCECLSFFPDLC--PPLLQCFVSKEVAEDEVLKVIYFIII---TCLLHSHLLQAV 121

Query: 62  EEQLNKIP 69
            + ++KIP
Sbjct: 122 LQGIHKIP 129


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.137    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,713,414
Number of Sequences: 37866
Number of extensions: 687697
Number of successful extensions: 2341
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2309
Number of HSP's gapped (non-prelim): 12
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.