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Search of human proteins with 24307969
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24307969 cytoplasmic FMR1 interacting protein 1 isoform a
[Homo sapiens]
(1253 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24307969 cytoplasmic FMR1 interacting protein 1 isoform a [Ho... 2524 0.0
gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens] 2250 0.0
gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens] 2250 0.0
gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens] 2250 0.0
gi|74271907 cytoplasmic FMR1 interacting protein 1 isoform b [Ho... 1411 0.0
gi|33285015 leucine rich repeat containing 28 [Homo sapiens] 35 0.45
gi|42734438 hypothetical protein LOC51571 [Homo sapiens] 35 0.59
gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa... 34 1.0
gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap... 34 1.0
gi|238908508 leucine-rich repeat and death domain-containing pro... 32 3.8
gi|13540580 family with sequence similarity 49, member A [Homo s... 32 5.0
gi|56711286 hypothetical protein LOC340533 [Homo sapiens] 31 8.5
>gi|24307969 cytoplasmic FMR1 interacting protein 1 isoform a [Homo
sapiens]
Length = 1253
Score = 2524 bits (6542), Expect = 0.0
Identities = 1253/1253 (100%), Positives = 1253/1253 (100%)
Query: 1 MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI 60
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
Sbjct: 1 MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS 180
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD 240
Query: 241 IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK 300
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
Sbjct: 241 IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI 360
Query: 361 SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT 420
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
Sbjct: 361 SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT 420
Query: 421 DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV 480
DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
Sbjct: 421 DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV 480
Query: 481 YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK 540
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
Sbjct: 481 YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK 540
Query: 541 SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF 600
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
Sbjct: 541 SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF 600
Query: 601 FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM 660
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
Sbjct: 601 FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM 660
Query: 661 MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS 720
MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS
Sbjct: 661 MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS 720
Query: 721 LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL 780
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL
Sbjct: 721 LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL 780
Query: 781 ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRIT 840
ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRIT
Sbjct: 781 ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRIT 840
Query: 841 LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS 900
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS
Sbjct: 841 LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS 900
Query: 901 IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC 960
IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
Sbjct: 901 IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC 960
Query: 961 RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC 1020
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC
Sbjct: 961 RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC 1020
Query: 1021 DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL 1080
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
Sbjct: 1021 DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL 1080
Query: 1081 LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI 1140
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
Sbjct: 1081 LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI 1140
Query: 1141 PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP 1200
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP
Sbjct: 1141 PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP 1200
Query: 1201 LKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
LKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS
Sbjct: 1201 LKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
>gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
Length = 1253
Score = 2250 bits (5830), Expect = 0.0
Identities = 1098/1253 (87%), Positives = 1178/1253 (94%), Gaps = 1/1253 (0%)
Query: 1 MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI 60
M VTLEDALSNVDLLEELPLPDQQPCIEPPPSS++YQ NF+TNFEDRNAFVTGIARYI
Sbjct: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEG EYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS 180
KLM FMYFQR AIERFC EV+RLCHAERRKDFVSEAYL+TLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHN+ITQ L QQLEVI GYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
Query: 241 IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK 300
IVN+CVDYYEN+MYLTPSEKHMLLKVMGFGLYLMDG+VSNIYKLDAKKRINLSKIDK+FK
Sbjct: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKS+WTCT S SPQYNICEQM+QIR+DH+RFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
Query: 361 SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT 420
SELARYSNSEVVTGSG ++QK+D EYR+LFDLAL+GLQLLS+WSAHVMEVYSWKLVHPT
Sbjct: 361 SELARYSNSEVVTGSGL-DSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPT 419
Query: 421 DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV 480
DK+ NKDCP +AEEYERATRYNYTSEEKFA VEVIAMIKGLQVLMGRMESVFN AIR+T+
Sbjct: 420 DKFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTI 479
Query: 481 YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK 540
YAALQDF+QVTLREPLRQA++KKKNV+ SVLQAIRKT+CDWE G EP NDP LRGEKDPK
Sbjct: 480 YAALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPK 539
Query: 541 SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF 600
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSL+GP +L IE FH++SF
Sbjct: 540 GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSF 599
Query: 601 FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM 660
F+THL+N SE LQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKE SM
Sbjct: 600 FFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSM 659
Query: 661 MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS 720
MEYVLY LDLYNDSA+YALT+F KQFLYDEIEAEVNLCFDQFVYKLADQIFAYYK MAGS
Sbjct: 660 MEYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS 719
Query: 721 LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL 780
+LLDKR R+ECKN G I PPSNRYETLLKQRHVQLLGRSIDLNRLITQR+SAAMYKSL
Sbjct: 720 VLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSL 779
Query: 781 ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRIT 840
+ AI RFESEDLTSIVEL+ LLEINR+TH+LL +++TLD FDAMFREANHNVSAPYGRIT
Sbjct: 780 DQAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRIT 839
Query: 841 LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS 900
LHVFWELN+DFLPNYCYNGSTNRFVRT +PF+QE QRDK N QP YL+GSK LN+AYS
Sbjct: 840 LHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSH 899
Query: 901 IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC 960
IY SYRNFVGPPHF+ ICRLLGYQGIAVVMEELLK+VKSLLQGTILQYVKTL+EVMPKIC
Sbjct: 900 IYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKIC 959
Query: 961 RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC 1020
RLPRHEYGSPGILEFFHHQLKDI+EYAELKT FQ+LREVGNAILFCLLIEQ+LS EEVC
Sbjct: 960 RLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVC 1019
Query: 1021 DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL 1080
DLLHAAPFQNILPRV++KEGERL+ +MKRLE+KYAPLHLVPLIERLGTPQQIAIAREGDL
Sbjct: 1020 DLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDL 1079
Query: 1081 LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI 1140
LTKERLCCGLSMFEVILTRIRS+L DPIWRGP P+NGVMHVDECVEFHRLWSAMQFVYCI
Sbjct: 1080 LTKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCI 1139
Query: 1141 PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP 1200
PVGT+EFT EQCFGDGL+WAGC IIVLLGQQRRF + DFCYHLLKVQ+ DGKDEIIKNVP
Sbjct: 1140 PVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVP 1199
Query: 1201 LKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
LKKM +RIRK+QILN+E+ IL+KY+KS + + + VEHVRCFQPPIHQSLA++
Sbjct: 1200 LKKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATT 1252
>gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
Length = 1253
Score = 2250 bits (5830), Expect = 0.0
Identities = 1098/1253 (87%), Positives = 1178/1253 (94%), Gaps = 1/1253 (0%)
Query: 1 MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI 60
M VTLEDALSNVDLLEELPLPDQQPCIEPPPSS++YQ NF+TNFEDRNAFVTGIARYI
Sbjct: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEG EYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS 180
KLM FMYFQR AIERFC EV+RLCHAERRKDFVSEAYL+TLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHN+ITQ L QQLEVI GYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
Query: 241 IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK 300
IVN+CVDYYEN+MYLTPSEKHMLLKVMGFGLYLMDG+VSNIYKLDAKKRINLSKIDK+FK
Sbjct: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKS+WTCT S SPQYNICEQM+QIR+DH+RFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
Query: 361 SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT 420
SELARYSNSEVVTGSG ++QK+D EYR+LFDLAL+GLQLLS+WSAHVMEVYSWKLVHPT
Sbjct: 361 SELARYSNSEVVTGSGL-DSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPT 419
Query: 421 DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV 480
DK+ NKDCP +AEEYERATRYNYTSEEKFA VEVIAMIKGLQVLMGRMESVFN AIR+T+
Sbjct: 420 DKFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTI 479
Query: 481 YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK 540
YAALQDF+QVTLREPLRQA++KKKNV+ SVLQAIRKT+CDWE G EP NDP LRGEKDPK
Sbjct: 480 YAALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPK 539
Query: 541 SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF 600
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSL+GP +L IE FH++SF
Sbjct: 540 GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSF 599
Query: 601 FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM 660
F+THL+N SE LQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKE SM
Sbjct: 600 FFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSM 659
Query: 661 MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS 720
MEYVLY LDLYNDSA+YALT+F KQFLYDEIEAEVNLCFDQFVYKLADQIFAYYK MAGS
Sbjct: 660 MEYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS 719
Query: 721 LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL 780
+LLDKR R+ECKN G I PPSNRYETLLKQRHVQLLGRSIDLNRLITQR+SAAMYKSL
Sbjct: 720 VLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSL 779
Query: 781 ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRIT 840
+ AI RFESEDLTSIVEL+ LLEINR+TH+LL +++TLD FDAMFREANHNVSAPYGRIT
Sbjct: 780 DQAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRIT 839
Query: 841 LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS 900
LHVFWELN+DFLPNYCYNGSTNRFVRT +PF+QE QRDK N QP YL+GSK LN+AYS
Sbjct: 840 LHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSH 899
Query: 901 IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC 960
IY SYRNFVGPPHF+ ICRLLGYQGIAVVMEELLK+VKSLLQGTILQYVKTL+EVMPKIC
Sbjct: 900 IYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKIC 959
Query: 961 RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC 1020
RLPRHEYGSPGILEFFHHQLKDI+EYAELKT FQ+LREVGNAILFCLLIEQ+LS EEVC
Sbjct: 960 RLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVC 1019
Query: 1021 DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL 1080
DLLHAAPFQNILPRV++KEGERL+ +MKRLE+KYAPLHLVPLIERLGTPQQIAIAREGDL
Sbjct: 1020 DLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDL 1079
Query: 1081 LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI 1140
LTKERLCCGLSMFEVILTRIRS+L DPIWRGP P+NGVMHVDECVEFHRLWSAMQFVYCI
Sbjct: 1080 LTKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCI 1139
Query: 1141 PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP 1200
PVGT+EFT EQCFGDGL+WAGC IIVLLGQQRRF + DFCYHLLKVQ+ DGKDEIIKNVP
Sbjct: 1140 PVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVP 1199
Query: 1201 LKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
LKKM +RIRK+QILN+E+ IL+KY+KS + + + VEHVRCFQPPIHQSLA++
Sbjct: 1200 LKKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATT 1252
>gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
Length = 1253
Score = 2250 bits (5830), Expect = 0.0
Identities = 1098/1253 (87%), Positives = 1178/1253 (94%), Gaps = 1/1253 (0%)
Query: 1 MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI 60
M VTLEDALSNVDLLEELPLPDQQPCIEPPPSS++YQ NF+TNFEDRNAFVTGIARYI
Sbjct: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEG EYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS 180
KLM FMYFQR AIERFC EV+RLCHAERRKDFVSEAYL+TLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHN+ITQ L QQLEVI GYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
Query: 241 IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK 300
IVN+CVDYYEN+MYLTPSEKHMLLKVMGFGLYLMDG+VSNIYKLDAKKRINLSKIDK+FK
Sbjct: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKS+WTCT S SPQYNICEQM+QIR+DH+RFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
Query: 361 SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT 420
SELARYSNSEVVTGSG ++QK+D EYR+LFDLAL+GLQLLS+WSAHVMEVYSWKLVHPT
Sbjct: 361 SELARYSNSEVVTGSGL-DSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPT 419
Query: 421 DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV 480
DK+ NKDCP +AEEYERATRYNYTSEEKFA VEVIAMIKGLQVLMGRMESVFN AIR+T+
Sbjct: 420 DKFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTI 479
Query: 481 YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK 540
YAALQDF+QVTLREPLRQA++KKKNV+ SVLQAIRKT+CDWE G EP NDP LRGEKDPK
Sbjct: 480 YAALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPK 539
Query: 541 SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF 600
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSL+GP +L IE FH++SF
Sbjct: 540 GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSF 599
Query: 601 FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM 660
F+THL+N SE LQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKE SM
Sbjct: 600 FFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSM 659
Query: 661 MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS 720
MEYVLY LDLYNDSA+YALT+F KQFLYDEIEAEVNLCFDQFVYKLADQIFAYYK MAGS
Sbjct: 660 MEYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS 719
Query: 721 LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL 780
+LLDKR R+ECKN G I PPSNRYETLLKQRHVQLLGRSIDLNRLITQR+SAAMYKSL
Sbjct: 720 VLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSL 779
Query: 781 ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRIT 840
+ AI RFESEDLTSIVEL+ LLEINR+TH+LL +++TLD FDAMFREANHNVSAPYGRIT
Sbjct: 780 DQAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRIT 839
Query: 841 LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS 900
LHVFWELN+DFLPNYCYNGSTNRFVRT +PF+QE QRDK N QP YL+GSK LN+AYS
Sbjct: 840 LHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSH 899
Query: 901 IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC 960
IY SYRNFVGPPHF+ ICRLLGYQGIAVVMEELLK+VKSLLQGTILQYVKTL+EVMPKIC
Sbjct: 900 IYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKIC 959
Query: 961 RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC 1020
RLPRHEYGSPGILEFFHHQLKDI+EYAELKT FQ+LREVGNAILFCLLIEQ+LS EEVC
Sbjct: 960 RLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVC 1019
Query: 1021 DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL 1080
DLLHAAPFQNILPRV++KEGERL+ +MKRLE+KYAPLHLVPLIERLGTPQQIAIAREGDL
Sbjct: 1020 DLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDL 1079
Query: 1081 LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI 1140
LTKERLCCGLSMFEVILTRIRS+L DPIWRGP P+NGVMHVDECVEFHRLWSAMQFVYCI
Sbjct: 1080 LTKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCI 1139
Query: 1141 PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP 1200
PVGT+EFT EQCFGDGL+WAGC IIVLLGQQRRF + DFCYHLLKVQ+ DGKDEIIKNVP
Sbjct: 1140 PVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVP 1199
Query: 1201 LKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
LKKM +RIRK+QILN+E+ IL+KY+KS + + + VEHVRCFQPPIHQSLA++
Sbjct: 1200 LKKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATT 1252
>gi|74271907 cytoplasmic FMR1 interacting protein 1 isoform b [Homo
sapiens]
Length = 822
Score = 1411 bits (3653), Expect = 0.0
Identities = 697/700 (99%), Positives = 697/700 (99%)
Query: 554 PSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESFFYTHLINFSETLQ 613
P QLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESFFYTHLINFSETLQ
Sbjct: 123 PWIIQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESFFYTHLINFSETLQ 182
Query: 614 QCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYND 673
QCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYND
Sbjct: 183 QCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYND 242
Query: 674 SAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLLDKRLRSECKN 733
SAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLLDKRLRSECKN
Sbjct: 243 SAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLLDKRLRSECKN 302
Query: 734 QGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLELAIGRFESEDLT 793
QGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLELAIGRFESEDLT
Sbjct: 303 QGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLELAIGRFESEDLT 362
Query: 794 SIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLP 853
SIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLP
Sbjct: 363 SIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLP 422
Query: 854 NYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSSIYGSYRNFVGPPH 913
NYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSSIYGSYRNFVGPPH
Sbjct: 423 NYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSSIYGSYRNFVGPPH 482
Query: 914 FQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGIL 973
FQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGIL
Sbjct: 483 FQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGIL 542
Query: 974 EFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNILP 1033
EFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNILP
Sbjct: 543 EFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNILP 602
Query: 1034 RVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMF 1093
RVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMF
Sbjct: 603 RVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMF 662
Query: 1094 EVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCF 1153
EVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCF
Sbjct: 663 EVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCF 722
Query: 1154 GDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQI 1213
GDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQI
Sbjct: 723 GDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQI 782
Query: 1214 LNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
LNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS
Sbjct: 783 LNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 822
>gi|33285015 leucine rich repeat containing 28 [Homo sapiens]
Length = 367
Score = 35.0 bits (79), Expect = 0.45
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 66 HSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIY--EKTVEVLEPEVTKLM 123
H + + +EG +Y LY R+ ++P+ + PN VE+Y + V+ + L+
Sbjct: 29 HFPLELLKDEGLQYLERLYMKRNSLTSLPENLAQKLPNLVELYLHSNNIVVVPEAIGSLV 88
Query: 124 NF--MYFQRNAIERFCGEVRRL 143
+ NA+E C E+ RL
Sbjct: 89 KLQCLDLSDNALEIVCPEIGRL 110
>gi|42734438 hypothetical protein LOC51571 [Homo sapiens]
Length = 324
Score = 34.7 bits (78), Expect = 0.59
Identities = 58/282 (20%), Positives = 109/282 (38%), Gaps = 36/282 (12%)
Query: 40 PNFNTNFEDRNAFVTGIARYIEQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCN 99
PNF +FE NA T + +++ +N +L++ + L ++R I +
Sbjct: 17 PNFFLDFE--NAQPTE-----SEKEIYNQVNVVLKDAEGILEDLQSYRGAGHEIREAI-- 67
Query: 100 EQPNRVEIYEKTVEVLEPEVTKLMNFMYFQRN---AIERFCGEVRRLCHAERRKDFVSEA 156
+ P ++ EK + P V KL F F + A+ G + ++ + +A
Sbjct: 68 QHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQA 127
Query: 157 YLITLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFLRKMADPQSIQESQN------L 210
+ ++ DELK +++ND S Y+R +R P + N +
Sbjct: 128 LAKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRINNVPAEGENEVNNELANRM 187
Query: 211 SMFLANHNKITQSLQQ------------QLEVISGYEELLADIVNLCVDYYENRMYLTPS 258
S+F A + ++L +E + +A + + ++ E R T
Sbjct: 188 SLFYAEATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVMLETPEYRSRFTNE 247
Query: 259 EK-HMLLKVMGFGLYLMD-----GSVSNIYKLDAKKRINLSK 294
E L+VM + L D G+ + K+D K I + K
Sbjct: 248 ETVSFCLRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLK 289
>gi|219555661 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 33.9 bits (76), Expect = 1.0
Identities = 41/198 (20%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 172 DELKNMKCSVKNDHSAYKRAAQFLRKM-ADPQSIQESQNLSMFLANHNKITQSLQ--QQL 228
DE K +++ + +K+ Q + ++ A+ +Q ++ L H I Q LQ ++
Sbjct: 395 DEFKRYVNKLRSKSTVFKKKHQIIAELKAEFGLLQRTEEL--LKQRHENIQQQLQTMEEK 452
Query: 229 EVISGYEELLADIVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKK 288
+ ISGY Y + + + K + ++ G L M V +Y L ++K
Sbjct: 453 KGISGYS------------YTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLYSLVSEK 500
Query: 289 RINLSKIDKYFKQLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQ 348
+ L+ + K +QL+ +Y + + +E KS++ ++G + EQ
Sbjct: 501 KSALASVIKELRQLR------------QKYQELTQECDEKKSQYDSCAAGLESNRSKLEQ 548
Query: 349 MIQIREDHMRFISELARY 366
++R + E +RY
Sbjct: 549 --EVRRLREECLQEESRY 564
>gi|32526901 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 33.9 bits (76), Expect = 1.0
Identities = 41/198 (20%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 172 DELKNMKCSVKNDHSAYKRAAQFLRKM-ADPQSIQESQNLSMFLANHNKITQSLQ--QQL 228
DE K +++ + +K+ Q + ++ A+ +Q ++ L H I Q LQ ++
Sbjct: 395 DEFKRYVNKLRSKSTVFKKKHQIIAELKAEFGLLQRTEEL--LKQRHENIQQQLQTMEEK 452
Query: 229 EVISGYEELLADIVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKK 288
+ ISGY Y + + + K + ++ G L M V +Y L ++K
Sbjct: 453 KGISGYS------------YTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLYSLVSEK 500
Query: 289 RINLSKIDKYFKQLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQ 348
+ L+ + K +QL+ +Y + + +E KS++ ++G + EQ
Sbjct: 501 KSALASVIKELRQLR------------QKYQELTQECDEKKSQYDSCAAGLESNRSKLEQ 548
Query: 349 MIQIREDHMRFISELARY 366
++R + E +RY
Sbjct: 549 --EVRRLREECLQEESRY 564
>gi|238908508 leucine-rich repeat and death domain-containing
protein [Homo sapiens]
Length = 860
Score = 32.0 bits (71), Expect = 3.8
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 27/140 (19%)
Query: 118 EVTKLMNF--MYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGK--FINMFAVLDE 173
E+++L N ++F N IE F ++ L + E +++LGK ++ L
Sbjct: 229 EISQLGNIRQLFFYNNYIENFPSDLECLGNLE----------ILSLGKNKLRHIPDTLPS 278
Query: 174 LKNMKCS--VKNDHSAYKRAAQFLRKMAD-----------PQSIQESQNLSMFLANHNKI 220
LK ++ N + + +A FL K+ P+ I+E +NL L +HNK+
Sbjct: 279 LKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKL 338
Query: 221 TQSLQQQLEVISGYEELLAD 240
T + +++ E LAD
Sbjct: 339 TFLAVEIFQLLKIKELQLAD 358
>gi|13540580 family with sequence similarity 49, member A [Homo
sapiens]
Length = 323
Score = 31.6 bits (70), Expect = 5.0
Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 65 VHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVK-CNEQPNRVEIYEKTVEVLEPEVTKLM 123
+ + ++ +L++ + L ++ P+++ + PN +++ EK + P V +L
Sbjct: 34 IWNQISAVLQDSESILADLQAYKGAG---PEIRDAIQNPNDIQLQEKAWNAVCPLVVRLK 90
Query: 124 NFMYFQ-------RNAIERF-CGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELK 175
F F ++ +E C H ER + E + ++ DELK
Sbjct: 91 RFYEFSIRLEKALQSLLESLTCPPYTPTQHLEREQALAKE-----FAEILHFTLRFDELK 145
Query: 176 NMKCSVKNDHSAYKR 190
+++ND S Y+R
Sbjct: 146 MRNPAIQNDFSYYRR 160
>gi|56711286 hypothetical protein LOC340533 [Homo sapiens]
Length = 1516
Score = 30.8 bits (68), Expect = 8.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 20 LPLPDQQPCIEPPPS--SLLYQPNFNTNFEDRNA--FVTGIAR 58
LPLP ++PC++ PPS L+ P N NA +GIA+
Sbjct: 65 LPLPSKKPCMQSPPSPLGLIEAPEHAANSASVNAISLTSGIAK 107
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,234,122
Number of Sequences: 37866
Number of extensions: 1950618
Number of successful extensions: 4442
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4434
Number of HSP's gapped (non-prelim): 12
length of query: 1253
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1139
effective length of database: 13,930,794
effective search space: 15867174366
effective search space used: 15867174366
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.