Guide to the Human Genome
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Search of human proteins with 24307949

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24307949 neurochondrin isoform 1 [Homo sapiens]
         (729 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24307949 neurochondrin isoform 1 [Homo sapiens]                   1451   0.0  
gi|62526029 neurochondrin isoform 1 [Homo sapiens]                   1451   0.0  
gi|62526031 neurochondrin isoform 2 [Homo sapiens]                   1417   0.0  
gi|207452735 epiplakin 1 [Homo sapiens]                                32   2.1  
gi|22748937 exportin 5 [Homo sapiens]                                  31   4.7  
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa...    30   6.1  
gi|199559954 coiled-coil domain containing 78 [Homo sapiens]           30   6.1  
gi|89191868 von Willebrand factor preproprotein [Homo sapiens]         30   7.9  
gi|5031955 solute carrier family 17 (sodium phosphate), member 2...    30   7.9  

>gi|24307949 neurochondrin isoform 1 [Homo sapiens]
          Length = 729

 Score = 1451 bits (3755), Expect = 0.0
 Identities = 729/729 (100%), Positives = 729/729 (100%)

Query: 1   MSCCDLAAAGQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVT 60
           MSCCDLAAAGQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVT
Sbjct: 1   MSCCDLAAAGQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVT 60

Query: 61  KAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPEL 120
           KAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPEL
Sbjct: 61  KAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPEL 120

Query: 121 AAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSA 180
           AAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSA
Sbjct: 121 AAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSA 180

Query: 181 LCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFEL 240
           LCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFEL
Sbjct: 181 LCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFEL 240

Query: 241 CQLLPLFLPPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAG 300
           CQLLPLFLPPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAG
Sbjct: 241 CQLLPLFLPPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAG 300

Query: 301 SSGSKFLALLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQ 360
           SSGSKFLALLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQ
Sbjct: 301 SSGSKFLALLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQ 360

Query: 361 KVQLVSVMKEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPF 420
           KVQLVSVMKEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPF
Sbjct: 361 KVQLVSVMKEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPF 420

Query: 421 LVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREI 480
           LVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREI
Sbjct: 421 LVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREI 480

Query: 481 LIKEGAPSLLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDA 540
           LIKEGAPSLLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDA
Sbjct: 481 LIKEGAPSLLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDA 540

Query: 541 CFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAI 600
           CFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAI
Sbjct: 541 CFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAI 600

Query: 601 LFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALR 660
           LFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALR
Sbjct: 601 LFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALR 660

Query: 661 SRWPQELLQLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMA 720
           SRWPQELLQLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMA
Sbjct: 661 SRWPQELLQLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMA 720

Query: 721 ALEQCLSEP 729
           ALEQCLSEP
Sbjct: 721 ALEQCLSEP 729


>gi|62526029 neurochondrin isoform 1 [Homo sapiens]
          Length = 729

 Score = 1451 bits (3755), Expect = 0.0
 Identities = 729/729 (100%), Positives = 729/729 (100%)

Query: 1   MSCCDLAAAGQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVT 60
           MSCCDLAAAGQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVT
Sbjct: 1   MSCCDLAAAGQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVT 60

Query: 61  KAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPEL 120
           KAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPEL
Sbjct: 61  KAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPEL 120

Query: 121 AAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSA 180
           AAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSA
Sbjct: 121 AAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSA 180

Query: 181 LCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFEL 240
           LCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFEL
Sbjct: 181 LCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFEL 240

Query: 241 CQLLPLFLPPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAG 300
           CQLLPLFLPPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAG
Sbjct: 241 CQLLPLFLPPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAG 300

Query: 301 SSGSKFLALLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQ 360
           SSGSKFLALLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQ
Sbjct: 301 SSGSKFLALLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQ 360

Query: 361 KVQLVSVMKEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPF 420
           KVQLVSVMKEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPF
Sbjct: 361 KVQLVSVMKEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPF 420

Query: 421 LVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREI 480
           LVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREI
Sbjct: 421 LVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREI 480

Query: 481 LIKEGAPSLLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDA 540
           LIKEGAPSLLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDA
Sbjct: 481 LIKEGAPSLLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDA 540

Query: 541 CFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAI 600
           CFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAI
Sbjct: 541 CFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAI 600

Query: 601 LFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALR 660
           LFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALR
Sbjct: 601 LFLSQSHVARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALR 660

Query: 661 SRWPQELLQLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMA 720
           SRWPQELLQLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMA
Sbjct: 661 SRWPQELLQLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMA 720

Query: 721 ALEQCLSEP 729
           ALEQCLSEP
Sbjct: 721 ALEQCLSEP 729


>gi|62526031 neurochondrin isoform 2 [Homo sapiens]
          Length = 712

 Score = 1417 bits (3668), Expect = 0.0
 Identities = 712/712 (100%), Positives = 712/712 (100%)

Query: 18  MASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVTKAVKAGDIDAKTRRRIF 77
           MASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVTKAVKAGDIDAKTRRRIF
Sbjct: 1   MASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVTKAVKAGDIDAKTRRRIF 60

Query: 78  DAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPELAAHPQVLNKIPILSTFL 137
           DAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPELAAHPQVLNKIPILSTFL
Sbjct: 61  DAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPELAAHPQVLNKIPILSTFL 120

Query: 138 TARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSALCQAYLGHGYGFDQALA 197
           TARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSALCQAYLGHGYGFDQALA
Sbjct: 121 TARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSALCQAYLGHGYGFDQALA 180

Query: 198 LLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFELCQLLPLFLPPTTVPPEC 257
           LLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFELCQLLPLFLPPTTVPPEC
Sbjct: 181 LLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFELCQLLPLFLPPTTVPPEC 240

Query: 258 YRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAGSSGSKFLALLVNLACVE 317
           YRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAGSSGSKFLALLVNLACVE
Sbjct: 241 YRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAGSSGSKFLALLVNLACVE 300

Query: 318 VRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQKVQLVSVMKEAIGAVIH 377
           VRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQKVQLVSVMKEAIGAVIH
Sbjct: 301 VRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQKVQLVSVMKEAIGAVIH 360

Query: 378 YLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPFLVRYAKTLYEEAEEAND 437
           YLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPFLVRYAKTLYEEAEEAND
Sbjct: 361 YLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPFLVRYAKTLYEEAEEAND 420

Query: 438 LSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREILIKEGAPSLLCKYFLQQ 497
           LSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREILIKEGAPSLLCKYFLQQ
Sbjct: 421 LSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREILIKEGAPSLLCKYFLQQ 480

Query: 498 WELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNTLMTSLPALV 557
           WELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNTLMTSLPALV
Sbjct: 481 WELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNTLMTSLPALV 540

Query: 558 QQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAILFLSQSHVARATPGSDQ 617
           QQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAILFLSQSHVARATPGSDQ
Sbjct: 541 QQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAILFLSQSHVARATPGSDQ 600

Query: 618 AVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSVSPN 677
           AVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSVSPN
Sbjct: 601 AVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSVSPN 660

Query: 678 SVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAALEQCLSEP 729
           SVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAALEQCLSEP
Sbjct: 661 SVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAALEQCLSEP 712


>gi|207452735 epiplakin 1 [Homo sapiens]
          Length = 5090

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 418  LPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGD 459
            LP L R    + EEAEEA     Q+ +    P  PGP   GD
Sbjct: 2564 LPALTRRLTAIIEEAEEAPGARPQLQDARRGPREPGPAGRGD 2605



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 418  LPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGD 459
            LP L R    + EEAEEA     Q+ +    P  PGP   GD
Sbjct: 3098 LPALTRRLTAIIEEAEEAPGARPQLQDAWRGPREPGPAGRGD 3139



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 418  LPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGD 459
            LP L R    + EEAEEA     Q+ +    P  PGP   GD
Sbjct: 3632 LPALTRRLTAIIEEAEEAPGARPQLQDAWRGPREPGPAGRGD 3673



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 418  LPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGD 459
            LP L R    + EEAEEA     Q+ +    P  PGP   GD
Sbjct: 4166 LPALTRRLTAIIEEAEEAPGARPQLQDAWRGPREPGPAGRGD 4207



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 418  LPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGD 459
            LP L R    + EEAEEA     Q+ +    P  PGP   GD
Sbjct: 4700 LPALTRRLTAIIEEAEEAPGARPQLQDAWRGPREPGPAGRGD 4741


>gi|22748937 exportin 5 [Homo sapiens]
          Length = 1204

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 172 LIAGGTVSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQK 231
           LIA GT++ L +    H      AL+ +V  +   E   W +  PD+L  L  LS+  + 
Sbjct: 97  LIANGTLNILEEE--NH---IKDALSRIVVEMIKRE---WPQHWPDMLIELDTLSKQGET 148

Query: 232 AEDASKFELCQLLPLFLPPTTVPPECYRDLQAGLA----RILGSKLSSWQRN 279
             +   F L +L    +   T+PP+  RD+Q  L     RI    L++ Q N
Sbjct: 149 QTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQEN 200


>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
           sapiens]
          Length = 631

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)

Query: 317 EVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQKVQLVSVMKEAIGAVI 376
           E++ ALE    E  E    +  A MEL  +E  R  Q + KE +++Q    ++EA+    
Sbjct: 391 ELQQALEGQLREA-EQARASMQAEMELKEEEAARQRQRI-KELEEMQ--QRLQEALQ--- 443

Query: 377 HYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPFLVRYAKTLYEEAEE-A 435
              L+V + + +E     SVRI    L EE     K++ QL     RY +   +E EE  
Sbjct: 444 ---LEVKARRDEE-----SVRIAQTRLLEEEEEKLKQLMQLKEEQERYIERAQQEKEELQ 495

Query: 436 NDLSQQVANL 445
            +++QQ  +L
Sbjct: 496 QEMAQQSRSL 505


>gi|199559954 coiled-coil domain containing 78 [Homo sapiens]
          Length = 438

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 8   AAGQ-LGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVTKAVKAG 66
           AAGQ L   +++   C+  L QAE  N  L+  L  L++      Q  A   V  A  AG
Sbjct: 203 AAGQRLATQAVVLCSCQGQLRQAEAENARLQLQLKKLKDEYVLRLQHCAWQAVEHADGAG 262

Query: 67  DIDAKTRRRIF 77
              A T  R F
Sbjct: 263 QAPATTALRTF 273


>gi|89191868 von Willebrand factor preproprotein [Homo sapiens]
          Length = 2813

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 13/107 (12%)

Query: 467  GWCHLTVEDGPREILIKEGAPSLLCKYFLQQWELTSPG-------HDTSVLPDS-----V 514
            G C +  E+G  + ++++G  +   K  +Q+W +  PG        +  ++PDS     +
Sbjct: 2083 GLCGICDENGANDFMLRDGTVTTDWKTLVQEWTVQRPGQTCQPILEEQCLVPDSSHCQVL 2142

Query: 515  EIGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNTLMTSLPALVQQQG 561
             + L   CH  L    T   + ++D+C    +  ++ S   L +  G
Sbjct: 2143 LLPLFAECHKVL-APATFYAICQQDSCHQEQVCEVIASYAHLCRTNG 2188


>gi|5031955 solute carrier family 17 (sodium phosphate), member 2
           [Homo sapiens]
          Length = 436

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 17/55 (30%), Positives = 26/55 (47%)

Query: 414 VCQLLPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGW 468
           VC LL F V Y   ++       +    +++LA  P++PG   P  A+   LP W
Sbjct: 222 VCCLLWFTVIYDDPMHHPCISVREKEHILSSLAQQPSSPGRAVPIKAMVTCLPLW 276


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,344,154
Number of Sequences: 37866
Number of extensions: 1290203
Number of successful extensions: 2968
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2950
Number of HSP's gapped (non-prelim): 15
length of query: 729
length of database: 18,247,518
effective HSP length: 110
effective length of query: 619
effective length of database: 14,082,258
effective search space: 8716917702
effective search space used: 8716917702
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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