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Search of human proteins with 24307871
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24307871 kidney predominant protein NCU-G1 [Homo sapiens]
(406 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24307871 kidney predominant protein NCU-G1 [Homo sapiens] 838 0.0
gi|31317309 phosphatidylinositol-4-phosphate 5-kinase, type I, g... 37 0.032
gi|126116592 Fc fragment of IgG, low affinity IIc, receptor [Hom... 32 1.0
gi|50511926 Fc fragment of IgG, low affinity IIb, receptor isofo... 32 1.0
gi|50511930 Fc fragment of IgG, low affinity IIb, receptor isofo... 32 1.0
gi|21735566 mitogen-activated protein kinase kinase kinase 7 iso... 31 1.8
gi|21735564 mitogen-activated protein kinase kinase kinase 7 iso... 31 1.8
gi|21735562 mitogen-activated protein kinase kinase kinase 7 iso... 31 1.8
gi|4507361 mitogen-activated protein kinase kinase kinase 7 isof... 31 1.8
gi|56549696 E1A binding protein p400 [Homo sapiens] 31 2.3
gi|50511928 Fc fragment of IgG, low affinity IIb, receptor isofo... 30 3.0
gi|50511932 Fc fragment of IgG, low affinity IIb, receptor isofo... 30 3.0
gi|167857798 pleiomorphic adenoma gene 1 isoform b [Homo sapiens] 30 5.1
gi|167857796 pleiomorphic adenoma gene 1 isoform a [Homo sapiens] 30 5.1
gi|167857794 pleiomorphic adenoma gene 1 isoform a [Homo sapiens] 30 5.1
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens] 29 6.7
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens] 29 6.7
gi|239757890 PREDICTED: similar to family with sequence similari... 29 6.7
gi|30410785 LIM homeobox protein 1 [Homo sapiens] 29 6.7
>gi|24307871 kidney predominant protein NCU-G1 [Homo sapiens]
Length = 406
Score = 838 bits (2164), Expect = 0.0
Identities = 406/406 (100%), Positives = 406/406 (100%)
Query: 1 MRGSVECTWGWGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQNLLHIR 60
MRGSVECTWGWGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQNLLHIR
Sbjct: 1 MRGSVECTWGWGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQNLLHIR 60
Query: 61 AVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDSIQFSS 120
AVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDSIQFSS
Sbjct: 61 AVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDSIQFSS 120
Query: 121 ALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSLDPATLSATFQGHPMND 180
ALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSLDPATLSATFQGHPMND
Sbjct: 121 ALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSLDPATLSATFQGHPMND 180
Query: 181 PTRTFANGSLAFRVQAFSRSSRPAQPPRLLHTADTCQLEVALIGASPRGNRSLFGLEVAT 240
PTRTFANGSLAFRVQAFSRSSRPAQPPRLLHTADTCQLEVALIGASPRGNRSLFGLEVAT
Sbjct: 181 PTRTFANGSLAFRVQAFSRSSRPAQPPRLLHTADTCQLEVALIGASPRGNRSLFGLEVAT 240
Query: 241 LGQGPDCPSMQEQHSIDDEYAPAVFQLDQLLWGSLPSGFAQWRPVAYSQKPGGRESALPC 300
LGQGPDCPSMQEQHSIDDEYAPAVFQLDQLLWGSLPSGFAQWRPVAYSQKPGGRESALPC
Sbjct: 241 LGQGPDCPSMQEQHSIDDEYAPAVFQLDQLLWGSLPSGFAQWRPVAYSQKPGGRESALPC 300
Query: 301 QASPLHPALAYSLPQSPIVRAFFGSQNNFCAFNLTFGASTGPGYWDQHYLSWSMLLGVGF 360
QASPLHPALAYSLPQSPIVRAFFGSQNNFCAFNLTFGASTGPGYWDQHYLSWSMLLGVGF
Sbjct: 301 QASPLHPALAYSLPQSPIVRAFFGSQNNFCAFNLTFGASTGPGYWDQHYLSWSMLLGVGF 360
Query: 361 PPVDGLSPLVLGIMAVALGAPGLMLLGGGLVLLLHHKKYSEYQSIN 406
PPVDGLSPLVLGIMAVALGAPGLMLLGGGLVLLLHHKKYSEYQSIN
Sbjct: 361 PPVDGLSPLVLGIMAVALGAPGLMLLGGGLVLLLHHKKYSEYQSIN 406
>gi|31317309 phosphatidylinositol-4-phosphate 5-kinase, type I,
gamma [Homo sapiens]
Length = 668
Score = 37.0 bits (84), Expect = 0.032
Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 20/149 (13%)
Query: 156 SWNNITDSLDPATLSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRPAQPPR------- 208
S+ T + TLS+T P P+ T R Q+ + RP + P
Sbjct: 515 SFEEATTASIATTLSSTSLSIPERSPSETSEQPRYRRRTQSSGQDGRPQEEPPAEEDLQQ 574
Query: 209 -LLHTADTCQLEVAL-------IGASPRGNRSLFGLEVATLGQGPDCPSMQEQHSIDDEY 260
+ C +E+ + + ASP G + +EV T Q D + D+E
Sbjct: 575 ITVQVEPACSVEIVVPKEEDAGVEASPAGASA--AVEVETASQASDEEGAPASQASDEED 632
Query: 261 APAV---FQLDQLLWGSLPSGFAQWRPVA 286
APA F D+ W P ++ P A
Sbjct: 633 APATDIYFPTDERSWVYSPLHYSAQAPPA 661
>gi|126116592 Fc fragment of IgG, low affinity IIc, receptor [Homo
sapiens]
Length = 323
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 11 WGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQ 54
WGH +LLWT +LF AP + L++ P W+ LQ
Sbjct: 25 WGH-----MLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINVLQ 63
>gi|50511926 Fc fragment of IgG, low affinity IIb, receptor
isoform 3 [Homo sapiens]
Length = 291
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 11 WGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQ 54
WGH +LLWT +LF AP + L++ P W+ LQ
Sbjct: 25 WGH-----MLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINVLQ 63
>gi|50511930 Fc fragment of IgG, low affinity IIb, receptor
isoform 1 [Homo sapiens]
Length = 310
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 11 WGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQ 54
WGH +LLWT +LF AP + L++ P W+ LQ
Sbjct: 25 WGH-----MLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINVLQ 63
>gi|21735566 mitogen-activated protein kinase kinase kinase 7
isoform D [Homo sapiens]
Length = 491
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 332 FNLTFGASTGPGYWDQHYLSWSMLLGVGFPPVDGLSPLVLGIMAVALGAPGLMLLGGGLV 391
+N+ GA P Y H +SW + G + + P L + L P L+L+ GG V
Sbjct: 113 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL--IHRDLKPPNLLLVAGGTV 170
Query: 392 L 392
L
Sbjct: 171 L 171
>gi|21735564 mitogen-activated protein kinase kinase kinase 7
isoform C [Homo sapiens]
Length = 518
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 332 FNLTFGASTGPGYWDQHYLSWSMLLGVGFPPVDGLSPLVLGIMAVALGAPGLMLLGGGLV 391
+N+ GA P Y H +SW + G + + P L + L P L+L+ GG V
Sbjct: 113 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL--IHRDLKPPNLLLVAGGTV 170
Query: 392 L 392
L
Sbjct: 171 L 171
>gi|21735562 mitogen-activated protein kinase kinase kinase 7
isoform B [Homo sapiens]
Length = 606
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 332 FNLTFGASTGPGYWDQHYLSWSMLLGVGFPPVDGLSPLVLGIMAVALGAPGLMLLGGGLV 391
+N+ GA P Y H +SW + G + + P L + L P L+L+ GG V
Sbjct: 113 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL--IHRDLKPPNLLLVAGGTV 170
Query: 392 L 392
L
Sbjct: 171 L 171
>gi|4507361 mitogen-activated protein kinase kinase kinase 7 isoform
A [Homo sapiens]
Length = 579
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 332 FNLTFGASTGPGYWDQHYLSWSMLLGVGFPPVDGLSPLVLGIMAVALGAPGLMLLGGGLV 391
+N+ GA P Y H +SW + G + + P L + L P L+L+ GG V
Sbjct: 113 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL--IHRDLKPPNLLLVAGGTV 170
Query: 392 L 392
L
Sbjct: 171 L 171
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 30.8 bits (68), Expect = 2.3
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 282 WRPVAYSQKPGGRESALPCQASP--LHPALAYSLPQSPI 318
++PV Y QKP GR A P P P A + PQ P+
Sbjct: 1427 FQPVQYGQKPEGRTVAFPSTHPPRTAAPTTASAAPQGPL 1465
>gi|50511928 Fc fragment of IgG, low affinity IIb, receptor
isoform 4 [Homo sapiens]
Length = 309
Score = 30.4 bits (67), Expect = 3.0
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 11 WGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQ 54
WGH +LLWT +LF AP + V L++ P W+ LQ
Sbjct: 25 WGH-----MLLWTAVLFLAPVAGTPAPPKAV-LKLEPQWINVLQ 62
>gi|50511932 Fc fragment of IgG, low affinity IIb, receptor
isoform 2 [Homo sapiens]
Length = 290
Score = 30.4 bits (67), Expect = 3.0
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 11 WGHCAPSPLLLWTLLLFAAPFGLLGEKTRQVSLEVIPNWLGPLQ 54
WGH +LLWT +LF AP + V L++ P W+ LQ
Sbjct: 25 WGH-----MLLWTAVLFLAPVAGTPAPPKAV-LKLEPQWINVLQ 62
>gi|167857798 pleiomorphic adenoma gene 1 isoform b [Homo sapiens]
Length = 418
Score = 29.6 bits (65), Expect = 5.1
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 83 VATNTPHSTLSVNWSLLLSPE----PDG-GLMVLPKDSIQFSS-----ALVFTRLLEFDS 132
V +++ S S + L L P+ DG G + L K SI S AL F++L F
Sbjct: 285 VPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIP 344
Query: 133 TNVSDTAAKPLGRPYPPYSLADFSWNNITDSLDPATLSATFQGHPMNDPTRTFANGSLAF 192
N G PY P S+ + + + Q + DP T GSL
Sbjct: 345 LN---------GPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHS 395
Query: 193 RVQAFSRS 200
AF+ S
Sbjct: 396 LSAAFTSS 403
>gi|167857796 pleiomorphic adenoma gene 1 isoform a [Homo sapiens]
Length = 500
Score = 29.6 bits (65), Expect = 5.1
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 83 VATNTPHSTLSVNWSLLLSPE----PDG-GLMVLPKDSIQFSS-----ALVFTRLLEFDS 132
V +++ S S + L L P+ DG G + L K SI S AL F++L F
Sbjct: 367 VPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIP 426
Query: 133 TNVSDTAAKPLGRPYPPYSLADFSWNNITDSLDPATLSATFQGHPMNDPTRTFANGSLAF 192
N G PY P S+ + + + Q + DP T GSL
Sbjct: 427 LN---------GPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHS 477
Query: 193 RVQAFSRS 200
AF+ S
Sbjct: 478 LSAAFTSS 485
>gi|167857794 pleiomorphic adenoma gene 1 isoform a [Homo sapiens]
Length = 500
Score = 29.6 bits (65), Expect = 5.1
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 83 VATNTPHSTLSVNWSLLLSPE----PDG-GLMVLPKDSIQFSS-----ALVFTRLLEFDS 132
V +++ S S + L L P+ DG G + L K SI S AL F++L F
Sbjct: 367 VPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIP 426
Query: 133 TNVSDTAAKPLGRPYPPYSLADFSWNNITDSLDPATLSATFQGHPMNDPTRTFANGSLAF 192
N G PY P S+ + + + Q + DP T GSL
Sbjct: 427 LN---------GPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHS 477
Query: 193 RVQAFSRS 200
AF+ S
Sbjct: 478 LSAAFTSS 485
>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
Length = 978
Score = 29.3 bits (64), Expect = 6.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 192 FRVQAFSRSSRPAQPPRLLHTADTCQLEVALIGASPRGNRSLFGLEVATLGQGP 245
F V A S R A PPRLL TC + + G +P S EV LG GP
Sbjct: 846 FVVGANRASHRAAAPPRLLPPLPTCYGPLKVGGTNP----SCGHPEVGRLGGGP 895
>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
Length = 1106
Score = 29.3 bits (64), Expect = 6.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 192 FRVQAFSRSSRPAQPPRLLHTADTCQLEVALIGASPRGNRSLFGLEVATLGQGP 245
F V A S R A PPRLL TC + + G +P S EV LG GP
Sbjct: 974 FVVGANRASHRAAAPPRLLPPLPTCYGPLKVGGTNP----SCGHPEVGRLGGGP 1023
>gi|239757890 PREDICTED: similar to family with sequence similarity
70, member A [Homo sapiens]
Length = 377
Score = 29.3 bits (64), Expect = 6.7
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Query: 148 PPYSLADFSWNNITDSLDPATLSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRPAQPP 207
PPYS DF + + S P+ LS ++P + S + A R S P PP
Sbjct: 265 PPYSAYDFQHSGVFPSSPPSGLS--------DEPQSASPSPSYMWSSSAPPRYSPPYYPP 316
Query: 208 RLLHTADTCQLEVALIGASPRGNRSLFGL 236
+ GASP RSLFGL
Sbjct: 317 -----FEKPXXXXXXXGASPA--RSLFGL 338
>gi|30410785 LIM homeobox protein 1 [Homo sapiens]
Length = 406
Score = 29.3 bits (64), Expect = 6.7
Identities = 35/122 (28%), Positives = 44/122 (36%), Gaps = 26/122 (21%)
Query: 227 PRGNRSLFGLEVATLGQGPDCPSMQEQHSIDDEYAPA-------VFQLDQLLWGSLPSGF 279
P GN F QGP PS Q Q +D + P+ + L+ L G PS
Sbjct: 289 PGGNYDFFP-------QGP--PSSQAQTPVDLPFVPSSGPSGTPLGGLEHPLPGHHPSSE 339
Query: 280 AQWRPVAYSQKPGGRESALPCQASPLHPALAYSLPQSPIVRAFFGSQNNFCAFNLTFGAS 339
AQ + PG S P PLH A FG F + ++ GAS
Sbjct: 340 AQRFTDILAHPPGDSPSPEPSLPGPLHSMSA----------EVFGPSPPFSSLSVNGGAS 389
Query: 340 TG 341
G
Sbjct: 390 YG 391
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,169,002
Number of Sequences: 37866
Number of extensions: 899551
Number of successful extensions: 1949
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1945
Number of HSP's gapped (non-prelim): 22
length of query: 406
length of database: 18,247,518
effective HSP length: 105
effective length of query: 301
effective length of database: 14,271,588
effective search space: 4295747988
effective search space used: 4295747988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.