Search of human proteins with 239754750

Search of human proteins with 239754750

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754750 PREDICTED: similar to FAM115A protein [Homo
sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754750 PREDICTED: similar to FAM115A protein [Homo sapiens]     420   e-118
gi|7662276 hypothetical protein LOC9747 [Homo sapiens]                420   e-118
gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]          182   1e-46
gi|194097428 hypothetical protein LOC285966 A [Homo sapiens]          182   1e-46
gi|194097425 hypothetical protein LOC285966 A [Homo sapiens]          182   1e-46
gi|5902072 serine (or cysteine) proteinase inhibitor, clade B (o...    30   1.00 
gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]         29   2.2  
gi|28076869 serine (or cysteine) proteinase inhibitor, clade B (...    28   3.8  
gi|239750922 PREDICTED: hypothetical protein [Homo sapiens]            28   4.9  
gi|239745320 PREDICTED: hypothetical protein XP_002343437 [Homo ...    28   4.9  
gi|64368880 zinc finger and SCAN domain containing 25 [Homo sapi...    28   6.5  

>gi|239754750 PREDICTED: similar to FAM115A protein [Homo sapiens]
          Length = 195

 Score =  420 bits (1080), Expect = e-118
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60
           MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV
Sbjct: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60

Query: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP 120
           YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP
Sbjct: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP 120

Query: 121 FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP 180
           FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP
Sbjct: 121 FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP 180

Query: 181 EWKENIMKLYLLTQM 195
           EWKENIMKLYLLTQM
Sbjct: 181 EWKENIMKLYLLTQM 195


>gi|7662276 hypothetical protein LOC9747 [Homo sapiens]
          Length = 921

 Score =  420 bits (1080), Expect = e-118
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60
           MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV
Sbjct: 725 MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 784

Query: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP 120
           YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP
Sbjct: 785 YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP 844

Query: 121 FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP 180
           FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP
Sbjct: 845 FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP 904

Query: 181 EWKENIMKLYLLTQM 195
           EWKENIMKLYLLTQM
Sbjct: 905 EWKENIMKLYLLTQM 919


>gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]
          Length = 564

 Score =  182 bits (463), Expect = 1e-46
 Identities = 79/112 (70%), Positives = 97/112 (86%)

Query: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60
           MH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG NQQR  WEFPPHTTEATCNLW V
Sbjct: 444 MHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGHNQQRHGWEFPPHTTEATCNLWSV 503

Query: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQL 112
           YVHETVLGIPR++A+ AL PP RE+R++ +L KG  + +WN WTALETYLQ+
Sbjct: 504 YVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPLCDWNVWTALETYLQV 555


>gi|194097428 hypothetical protein LOC285966 A [Homo sapiens]
          Length = 845

 Score =  182 bits (463), Expect = 1e-46
 Identities = 79/112 (70%), Positives = 97/112 (86%)

Query: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60
           MH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG NQQR  WEFPPHTTEATCNLW V
Sbjct: 725 MHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGHNQQRHGWEFPPHTTEATCNLWSV 784

Query: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQL 112
           YVHETVLGIPR++A+ AL PP RE+R++ +L KG  + +WN WTALETYLQ+
Sbjct: 785 YVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPLCDWNVWTALETYLQV 836


>gi|194097425 hypothetical protein LOC285966 A [Homo sapiens]
          Length = 845

 Score =  182 bits (463), Expect = 1e-46
 Identities = 79/112 (70%), Positives = 97/112 (86%)

Query: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60
           MH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG NQQR  WEFPPHTTEATCNLW V
Sbjct: 725 MHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGHNQQRHGWEFPPHTTEATCNLWSV 784

Query: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQL 112
           YVHETVLGIPR++A+ AL PP RE+R++ +L KG  + +WN WTALETYLQ+
Sbjct: 785 YVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPLCDWNVWTALETYLQV 836


>gi|5902072 serine (or cysteine) proteinase inhibitor, clade B
           (ovalbumin), member 3 [Homo sapiens]
          Length = 390

 Score = 30.4 bits (67), Expect = 1.00
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 107 ETYLQLQEAF-GWEPFIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAP 159
           +TYL LQE     + F +   E  +  N P E+  K+N WV+  +++  KNL P
Sbjct: 111 KTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIKNLIP 164


>gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]
          Length = 485

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 30 GPVHEL-GRNQQRQEWEFPPHTTEATCNLWCVYVHETVLG 68
          GP  EL G+  +R  W +PPH  +     W +Y+   V+G
Sbjct: 29 GPSPELQGQRSRRNGWSWPPHPLQIVA--WLLYLFFAVIG 66


>gi|28076869 serine (or cysteine) proteinase inhibitor, clade B
           (ovalbumin), member 4 [Homo sapiens]
          Length = 390

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 107 ETYLQLQEAF-GWEPFIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAP 159
           +TY  LQE     + F +   E  +  N P E+  K+N WV+  +++  KNL P
Sbjct: 111 KTYQFLQEYLDAIKKFYQTSVESTDFANAPEESRKKINSWVESQTNEKIKNLFP 164


>gi|239750922 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 923

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 48  PHTTEATCNLWCVYVHETVLGIPRSRANIALWPPVREKRVR-IYLSKGPNVKN 99
           P + EAT + WC     +V G+P +  N A  PP RE   R ++L  G  ++N
Sbjct: 808 PVSYEATHSQWCHLHCGSVNGLPMA-LNSAFIPPARELADRKVHLPPGSRLEN 859


>gi|239745320 PREDICTED: hypothetical protein XP_002343437 [Homo
           sapiens]
          Length = 923

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 48  PHTTEATCNLWCVYVHETVLGIPRSRANIALWPPVREKRVR-IYLSKGPNVKN 99
           P + EAT + WC     +V G+P +  N A  PP RE   R ++L  G  ++N
Sbjct: 808 PVSYEATHSQWCHLHCGSVNGLPMA-LNSAFIPPARELADRKVHLPPGSRLEN 859


>gi|64368880 zinc finger and SCAN domain containing 25 [Homo
           sapiens]
          Length = 544

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 7   IMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPP 48
           + CH +  QE    +    +G W P  +LG  + + EW  PP
Sbjct: 130 VPCHRQGEQE----ETALCRGAWEPGIQLGPVEVKPEWGMPP 167


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,930,048
Number of Sequences: 37866
Number of extensions: 325172
Number of successful extensions: 549
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 544
Number of HSP's gapped (non-prelim): 11
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.