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Search of human proteins with 118918409
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118918409 transmembrane protein 69 [Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118918409 transmembrane protein 69 [Homo sapiens] 496 e-141
gi|64464726 KN motif and ankyrin repeat domains 1 isoform a [Hom... 30 1.5
gi|224465202 synaptosomal-associated protein, 47kDa [Homo sapiens] 30 1.9
gi|205830426 solute carrier family 39 (zinc transporter), member... 29 4.3
gi|205830424 solute carrier family 39 (zinc transporter), member... 29 4.3
gi|190360568 solute carrier family 39 (zinc transporter), member... 29 4.3
gi|21361449 solute carrier family 2 (facilitated glucose transpo... 29 4.3
gi|224994173 roundabout 1 isoform d [Homo sapiens] 28 7.4
gi|224994171 roundabout 1 isoform c [Homo sapiens] 28 7.4
gi|19743806 roundabout 1 isoform b [Homo sapiens] 28 7.4
gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo ... 28 7.4
gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo ... 28 7.4
gi|4506569 roundabout 1 isoform a [Homo sapiens] 28 7.4
gi|139394599 hypermethylated in cancer 2 [Homo sapiens] 28 7.4
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 28 9.6
>gi|118918409 transmembrane protein 69 [Homo sapiens]
Length = 247
Score = 496 bits (1277), Expect = e-141
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MLRFIQKFSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSK 60
MLRFIQKFSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSK
Sbjct: 1 MLRFIQKFSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSK 60
Query: 61 TQCYHTSPCSFKKQQKQALLARPSSTITYLTDSPKPALCVTLAGLIPFVAPPLVMLMTKT 120
TQCYHTSPCSFKKQQKQALLARPSSTITYLTDSPKPALCVTLAGLIPFVAPPLVMLMTKT
Sbjct: 61 TQCYHTSPCSFKKQQKQALLARPSSTITYLTDSPKPALCVTLAGLIPFVAPPLVMLMTKT 120
Query: 121 YIPILAFTQMAYGASFLSFLGGIRWGFALPEGSPAKPDYLNLASSAAPLFFSWFAFLISE 180
YIPILAFTQMAYGASFLSFLGGIRWGFALPEGSPAKPDYLNLASSAAPLFFSWFAFLISE
Sbjct: 121 YIPILAFTQMAYGASFLSFLGGIRWGFALPEGSPAKPDYLNLASSAAPLFFSWFAFLISE 180
Query: 181 RLSEAIVTVIMGMGVAFHLELFLLPHYPNWFKALRIVVTLLATFSFIITLVVKSSFPEKG 240
RLSEAIVTVIMGMGVAFHLELFLLPHYPNWFKALRIVVTLLATFSFIITLVVKSSFPEKG
Sbjct: 181 RLSEAIVTVIMGMGVAFHLELFLLPHYPNWFKALRIVVTLLATFSFIITLVVKSSFPEKG 240
Query: 241 HKRPGQV 247
HKRPGQV
Sbjct: 241 HKRPGQV 247
>gi|64464726 KN motif and ankyrin repeat domains 1 isoform a [Homo
sapiens]
Length = 1352
Score = 30.4 bits (67), Expect = 1.5
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 44 PCPRPWLSSSFPAYMSKTQCYHTSPCSFKKQQKQALLARPSSTITYLTDSPKPALCVTLA 103
PCP P +S + T+ +S KQ L+AR T T ++ P P L
Sbjct: 72 PCPEPRTTSGQQGIWTSTESLSSSNSDDNKQCPNFLIARSQVTSTPISKPPPP-----LE 126
Query: 104 GLIPFVAPP 112
+PF+ P
Sbjct: 127 TSLPFLTIP 135
>gi|224465202 synaptosomal-associated protein, 47kDa [Homo
sapiens]
Length = 464
Score = 30.0 bits (66), Expect = 1.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 46 PRPWLSSSFPAYMSKTQCYHTSPCSF----KKQQKQALLARPSSTITYLTDS 93
P PW + + MS+ C HT PC++ K++ L+ S ++ ++TDS
Sbjct: 35 PGPWRTQT-QEQMSRDVCIHTWPCTYYLEPKRRWVTGQLSLTSLSLRFMTDS 85
>gi|205830426 solute carrier family 39 (zinc transporter), member 14
isoform c [Homo sapiens]
Length = 481
Score = 28.9 bits (63), Expect = 4.3
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 98 LCVTLAGLIPFVAPPLVMLMTKTYIP--ILAFTQMAYGASFLSFLGGIRWGFALPEGSPA 155
LCVT+ L + +V M KT+ +L F +A G + + L + +PE
Sbjct: 159 LCVTVISLCSLLGASVVPFMKKTFYKRLLLYFIALAIGTLYSNALFQL-----IPEAFGF 213
Query: 156 KPDYLNLASSAAPLFFSWFAFLISERLSEAIV 187
P S +A +F ++ F +E++ + ++
Sbjct: 214 NPLEDYYVSKSAVVFGGFYLFFFTEKILKILL 245
>gi|205830424 solute carrier family 39 (zinc transporter), member 14
isoform a [Homo sapiens]
Length = 492
Score = 28.9 bits (63), Expect = 4.3
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 98 LCVTLAGLIPFVAPPLVMLMTKTYIP--ILAFTQMAYGASFLSFLGGIRWGFALPEGSPA 155
LCVT+ L + +V M KT+ +L F +A G + + L + +PE
Sbjct: 159 LCVTVISLCSLLGASVVPFMKKTFYKRLLLYFIALAIGTLYSNALFQL-----IPEAFGF 213
Query: 156 KPDYLNLASSAAPLFFSWFAFLISERLSEAIV 187
P S +A +F ++ F +E++ + ++
Sbjct: 214 NPLEDYYVSKSAVVFGGFYLFFFTEKILKILL 245
>gi|190360568 solute carrier family 39 (zinc transporter), member 14
isoform a [Homo sapiens]
Length = 492
Score = 28.9 bits (63), Expect = 4.3
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 98 LCVTLAGLIPFVAPPLVMLMTKTYIP--ILAFTQMAYGASFLSFLGGIRWGFALPEGSPA 155
LCVT+ L + +V M KT+ +L F +A G + + L + +PE
Sbjct: 159 LCVTVISLCSLLGASVVPFMKKTFYKRLLLYFIALAIGTLYSNALFQL-----IPEAFGF 213
Query: 156 KPDYLNLASSAAPLFFSWFAFLISERLSEAIV 187
P S +A +F ++ F +E++ + ++
Sbjct: 214 NPLEDYYVSKSAVVFGGFYLFFFTEKILKILL 245
>gi|21361449 solute carrier family 2 (facilitated glucose
transporter), member 8 [Homo sapiens]
Length = 477
Score = 28.9 bits (63), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 134 ASFLSFLGGIRWGFALPEGSPAKPDYLNLASSAAPL---FFSWFAFLIS 179
A+F + LG + +GFAL SPA P A A L SWF +++
Sbjct: 29 AAFAAALGPLSFGFALGYSSPAIPSLQRAAPPAPRLDDAAASWFGAVVT 77
>gi|224994173 roundabout 1 isoform d [Homo sapiens]
Length = 1551
Score = 28.1 bits (61), Expect = 7.4
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 8 FSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTS 67
F+QA + +Y+ GL+ +R + + S CPRP S + MS T
Sbjct: 1303 FAQAVAAAAEYA---GLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTR 1359
Query: 68 PCSFKKQQKQALLARPSSTITYLTDSPKP 96
P K Q L TY D P P
Sbjct: 1360 PAKKLKHQPGHLRRE-----TYTDDLPPP 1383
>gi|224994171 roundabout 1 isoform c [Homo sapiens]
Length = 1606
Score = 28.1 bits (61), Expect = 7.4
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 8 FSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTS 67
F+QA + +Y+ GL+ +R + + S CPRP S + MS T
Sbjct: 1358 FAQAVAAAAEYA---GLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTR 1414
Query: 68 PCSFKKQQKQALLARPSSTITYLTDSPKP 96
P K Q L TY D P P
Sbjct: 1415 PAKKLKHQPGHLRRE-----TYTDDLPPP 1438
>gi|19743806 roundabout 1 isoform b [Homo sapiens]
Length = 1612
Score = 28.1 bits (61), Expect = 7.4
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 8 FSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTS 67
F+QA + +Y+ GL+ +R + + S CPRP S + MS T
Sbjct: 1364 FAQAVAAAAEYA---GLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTR 1420
Query: 68 PCSFKKQQKQALLARPSSTITYLTDSPKP 96
P K Q L TY D P P
Sbjct: 1421 PAKKLKHQPGHLRRE-----TYTDDLPPP 1444
>gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo
sapiens]
Length = 1562
Score = 28.1 bits (61), Expect = 7.4
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 8 FSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTS 67
F+QA + +Y+ GL+ +R + + S CPRP S + MS T
Sbjct: 1314 FAQAVAAAAEYA---GLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTR 1370
Query: 68 PCSFKKQQKQALLARPSSTITYLTDSPKP 96
P K Q L TY D P P
Sbjct: 1371 PAKKLKHQPGHLRRE-----TYTDDLPPP 1394
>gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo
sapiens]
Length = 1615
Score = 28.1 bits (61), Expect = 7.4
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 8 FSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTS 67
F+QA + +Y+ GL+ +R + + S CPRP S + MS T
Sbjct: 1367 FAQAVAAAAEYA---GLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTR 1423
Query: 68 PCSFKKQQKQALLARPSSTITYLTDSPKP 96
P K Q L TY D P P
Sbjct: 1424 PAKKLKHQPGHLRRE-----TYTDDLPPP 1447
>gi|4506569 roundabout 1 isoform a [Homo sapiens]
Length = 1651
Score = 28.1 bits (61), Expect = 7.4
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 8 FSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTS 67
F+QA + +Y+ GL+ +R + + S CPRP S + MS T
Sbjct: 1403 FAQAVAAAAEYA---GLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTR 1459
Query: 68 PCSFKKQQKQALLARPSSTITYLTDSPKP 96
P K Q L TY D P P
Sbjct: 1460 PAKKLKHQPGHLRRE-----TYTDDLPPP 1483
>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
Length = 615
Score = 28.1 bits (61), Expect = 7.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 128 TQMAYGASFLSFLGGIRWGFALPEGSPAKPDYLNLASSAAPLFFSWFAFLISERLSEA 185
T M F L I G LP PA+P++ L ++A+ L A L +L A
Sbjct: 85 TDMVSSTVFQQILDFIYTGKLLPSDQPAEPNFSTLLTAASYLQLPELAALCRRKLKRA 142
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 27.7 bits (60), Expect = 9.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 27 SRTDILSLKMSLQQNFS--------PCPRPWLSSSFPAYMSKTQCYHTSP 68
S T + +LK Q++ S P +PW+S PA+ +++ Y +SP
Sbjct: 662 SPTALSTLKQDSQESISNLERPSSPPSIQPWVSPHNPAFATESPAYGSSP 711
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,136,668
Number of Sequences: 37866
Number of extensions: 383767
Number of successful extensions: 1150
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1147
Number of HSP's gapped (non-prelim): 15
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.