Guide to the Human Genome
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Name: LOC729249 Sequence: fasta or formatted (211aa) NCBI GI: 239753890
Description:

PREDICTED: similar to kelch-like 2, Mayven (Drosophila)

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         15           2
 C cysteine            3.8          8           1
 D aspartate           5.2         11           2
 E glutamate           5.7         12           2
 F phenylalanine       3.8          8           1
 G glycine             4.7         10           2
 H histidine           4.7         10           1
 I isoleucine          4.3          9           1
 K lysine              6.2         13           2
 L leucine            10.9         23           2
 M methionine          4.3          9           1
 N asparagine          5.7         12           1
 P proline             3.3          7           1
 Q glutamine           3.3          7           1
 R arginine            3.8          8           1
 S serine              5.2         11           1
 T threonine           6.2         13           1
 V valine              7.6         16           2
 W tryptophan          1.9          4           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to kelch-like 2, Mayven (Drosoph... 
KLHL2                 0.680   kelch-like 2, Mayven isoform 2 
KLHL2                 0.675   kelch-like 2, Mayven isoform 1 
KLHL3                 0.431   kelch-like 3 
KLHL2                 0.277   kelch-like 2, Mayven isoform 3 
KLHL17                0.246   kelch-like 17 
KLHL20                0.239   kelch-like 20 
KLHL12                0.231   kelch-like 12 
KLHL5                 0.198   kelch-like 5 isoform 3 
KLHL5                 0.198   kelch-like 5 isoform 1 
KLHL18                0.186   kelch-like 18 
KLHL4                 0.183   kelch-like 4 isoform 2 
KLHL4                 0.183   kelch-like 4 isoform 1 
KLHL28                0.181   BTB (POZ) domain containing 5 
KLHL24                0.171   DRE1 protein 
KLHL1                 0.166   kelch-like 1 protein 
IPP                   0.161   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.161   intracisternal A particle-promoted polypeptide isof...
ENC1                  0.159   ectodermal-neural cortex (with BTB-like domain) [Homo...
KLHL10                0.157   kelch-like 10 
KLHL6                 0.152   kelch-like 6 
KLHL8                 0.152   kelch-like 8 
KLHL7                 0.147   kelch-like 7 isoform 1 
KEAP1                 0.147   kelch-like ECH-associated protein 1 
KEAP1                 0.147   kelch-like ECH-associated protein 1 
KLHL21                0.147   kelch-like 21 
KLHL38                0.142   kelch-like 38 
KLHL5                 0.137   kelch-like 5 isoform 2 
KLHL30                0.135   kelch-like 30 
KBTBD2                0.135   kelch repeat and BTB (POZ) domain containing 2 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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