Guide to the Human Genome
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Search of human proteins with 117414158

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|117414158 peptidylarginine deiminase type 6 [Homo sapiens]
         (694 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|117414158 peptidylarginine deiminase type 6 [Homo sapiens]        1414   0.0  
gi|216548487 peptidyl arginine deiminase, type IV [Homo sapiens]      594   e-169
gi|122939161 peptidyl arginine deiminase, type III [Homo sapiens]     557   e-158
gi|122056685 peptidylarginine deiminase type I [Homo sapiens]         557   e-158
gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]      538   e-153
gi|13787217 FAT tumor suppressor 2 precursor [Homo sapiens]            31   3.4  
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]        31   4.4  
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]        31   4.4  
gi|118498343 ATPase, Ca++ transporting, type 2C, member 2 [Homo ...    30   5.8  

>gi|117414158 peptidylarginine deiminase type 6 [Homo sapiens]
          Length = 694

 Score = 1414 bits (3661), Expect = 0.0
 Identities = 694/694 (100%), Positives = 694/694 (100%)

Query: 1   MVSVEGRAMSFQSIIHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDV 60
           MVSVEGRAMSFQSIIHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDV
Sbjct: 1   MVSVEGRAMSFQSIIHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDV 60

Query: 61  ANTVISEKEDATIWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLT 120
           ANTVISEKEDATIWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLT
Sbjct: 61  ANTVISEKEDATIWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLT 120

Query: 121 GIEVSLEVDIYRNGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKV 180
           GIEVSLEVDIYRNGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKV
Sbjct: 121 GIEVSLEVDIYRNGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKV 180

Query: 181 IFSEEITNLSQMTLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDNSSTFELVLGPD 240
           IFSEEITNLSQMTLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDNSSTFELVLGPD
Sbjct: 181 IFSEEITNLSQMTLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDNSSTFELVLGPD 240

Query: 241 QHAYTLALLGNHLKETFYVEAIAFPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVF 300
           QHAYTLALLGNHLKETFYVEAIAFPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVF
Sbjct: 241 QHAYTLALLGNHLKETFYVEAIAFPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVF 300

Query: 301 RVAPCVFIPCTQVPLEVYLCRELQLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDE 360
           RVAPCVFIPCTQVPLEVYLCRELQLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDE
Sbjct: 301 RVAPCVFIPCTQVPLEVYLCRELQLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDE 360

Query: 361 MAFCYTQAPHKTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLM 420
           MAFCYTQAPHKTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLM
Sbjct: 361 MAFCYTQAPHKTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLM 420

Query: 421 VSPPVKVQGKEYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGH 480
           VSPPVKVQGKEYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGH
Sbjct: 421 VSPPVKVQGKEYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGH 480

Query: 481 VDEFMCFIPTDDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNG 540
           VDEFMCFIPTDDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNG
Sbjct: 481 VDEFMCFIPTDDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNG 540

Query: 541 REAKTIDQLLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIP 600
           REAKTIDQLLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIP
Sbjct: 541 REAKTIDQLLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIP 600

Query: 601 SDQQPKRSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTF 660
           SDQQPKRSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTF
Sbjct: 601 SDQQPKRSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTF 660

Query: 661 INDFDCYLTEVGDICACANIRRVPFAFKWWKMVP 694
           INDFDCYLTEVGDICACANIRRVPFAFKWWKMVP
Sbjct: 661 INDFDCYLTEVGDICACANIRRVPFAFKWWKMVP 694


>gi|216548487 peptidyl arginine deiminase, type IV [Homo sapiens]
          Length = 663

 Score =  594 bits (1531), Expect = e-169
 Identities = 308/688 (44%), Positives = 443/688 (64%), Gaps = 27/688 (3%)

Query: 9   MSFQSIIHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDVANTVISEK 68
           M+  ++I ++ + P HAVCVLGT   LD+   AP+ C  F+I+ S  V++D+A+   ++K
Sbjct: 1   MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK 60

Query: 69  EDA-TIWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLTGIEVSLE 127
           +   +  WPL      T+ M   S S    KV ++YYGP    P   A+LYLTG+E+SL 
Sbjct: 61  KSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPK--TPPVKALLYLTGVEISLC 118

Query: 128 VDIYRNGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKVIFSEEIT 187
            DI R G+V+ +   + ++ W WGP G GAILLVNC+  ++     D +  +V+ SE++ 
Sbjct: 119 ADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQ 178

Query: 188 NLSQMTLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDN-SSTFELVLGPDQHAYTL 246
           ++S MTL+ + P      + LVLH ++ E  K RV+   +   SS   +VLGP   ++ L
Sbjct: 179 DMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHYL 238

Query: 247 ALLGNHLKETFYVEAIAFPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVFRVAPCV 306
            + G      FYVEA+AFP  +F GLI+ ++SL++ S +  +PE V+++D+VVFRVAP +
Sbjct: 239 MVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTS-NLELPEAVVFQDSVVFRVAPWI 297

Query: 307 FIPCTQVPLEVYLCRELQLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDEMAFCYT 366
             P TQ P EVY C   + + F+ +VT L+ K+  ++    E+ N   +W+QDEM   Y 
Sbjct: 298 MTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYI 357

Query: 367 QAPHKTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLMVSPPVK 426
           QAPHKT  ++ D+P+   L EFP+K  + P  GY+ +  +   ++ +DS GNL VSPPV 
Sbjct: 358 QAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVT 417

Query: 427 VQGKEYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGHVDEFMC 486
           V+GKEYPLGR+L G S YPS + R M + L+DFL AQQVQAPV+LYSDWL  GHVDEF+ 
Sbjct: 418 VRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLS 477

Query: 487 FIPTDDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNGREAKTI 546
           F+P  D    +KGF LLLASP +CYKLF+E+Q EG+G+ALLF+ ++        ++ + I
Sbjct: 478 FVPAPD----RKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKK-------KKQQKI 526

Query: 547 DQLLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIPSDQQPK 606
             +L++++L++ N +VE+CI  NR++LK ELGL E DII+IPQLF L++           
Sbjct: 527 KNILSNKTLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEF---------- 576

Query: 607 RSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTFINDFDC 666
            S A  +FP+++ M+V+GK+LGIPKPFGP I G CCLEEK+C LLEPLG +CTFINDF  
Sbjct: 577 -SKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFT 635

Query: 667 YLTEVGDICACANIRRVPFAFKWWKMVP 694
           Y    G++    N+RR PF+FKWW MVP
Sbjct: 636 YHIRHGEVHCGTNVRRKPFSFKWWNMVP 663


>gi|122939161 peptidyl arginine deiminase, type III [Homo sapiens]
          Length = 664

 Score =  557 bits (1436), Expect = e-158
 Identities = 297/689 (43%), Positives = 432/689 (62%), Gaps = 28/689 (4%)

Query: 9   MSFQSIIHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDVANTVISEK 68
           MS Q I+ +SL+ P  AVCV G E  +D+ G  P+  + F ++G+  V I ++  +   +
Sbjct: 1   MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60

Query: 69  EDA-TIWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLTGIEVSLE 127
           E A T  W         V M SPS  ++   V ++Y+  +E  P+  AVLYLT +++SL+
Sbjct: 61  ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120

Query: 128 VDIYRNGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKVIFSEEIT 187
            D+   G+ + +     K++W+WGPSG+G ILLVNC+  D    ++D   + V   +++ 
Sbjct: 121 CDLNCEGRQDRNFVD--KRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLE 178

Query: 188 NLSQMTLNVQGPSCILKKYRLVLHTSKEESKKARVYW--PQKDNSSTFELVLGPDQHAYT 245
           ++S M L  QGP+ +   ++LVLHTS  ++K+A+V+     +D    +  VLG D+ +Y 
Sbjct: 179 DMSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYE 238

Query: 246 LALLGNHLKETFYVEAIAFPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVFRVAPC 305
           +  L    +E F+VE ++FP A F+GLIS+ V+L+++S +     + ++ DTVVFRVAP 
Sbjct: 239 VPRLHGD-EERFFVEGLSFPDAGFTGLISFHVTLLDDSNE-DFSASPIFTDTVVFRVAPW 296

Query: 306 VFIPCTQVPLEVYLCRELQLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDEMAFCY 365
           +  P T  PLEVY+CR      FVD V +L+ K+  ++    +  NR  RW+QDEM   Y
Sbjct: 297 IMTPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGY 356

Query: 366 TQAPHKTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLMVSPPV 425
            QAPHKT  ++ D+P+  +L +FP K  L P  GY+ ++  D  V+ +DS GNL VSPPV
Sbjct: 357 VQAPHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPV 416

Query: 426 KVQGKEYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGHVDEFM 485
              GKEYPLGR+LIG +  P + GR +++ +RDFL+AQ+VQ PVEL+ DWL  GHVDEF+
Sbjct: 417 VANGKEYPLGRILIGGNL-PGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFL 475

Query: 486 CFIPTDDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNGREAKT 545
            F+P  D     KGF +LLASP AC+KLF+EKQK G+G ALLF  +  D+ +    +  +
Sbjct: 476 SFVPAPD----GKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQV----KTIS 527

Query: 546 IDQLLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIPSDQQP 605
           I+Q+L+++ L   N++V+ CI  NR++LK ELGL E DII+IPQLF            + 
Sbjct: 528 INQVLSNKDLINYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLF------------KT 575

Query: 606 KRSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTFINDFD 665
           +R  A  +FPDL+ M+V+GK+LGIPKPFGP I G CCLEEK+  LLEPLG  CTFI+DF 
Sbjct: 576 ERKKATAFFPDLVNMLVLGKHLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFT 635

Query: 666 CYLTEVGDICACANIRRVPFAFKWWKMVP 694
            Y    G++    N+ R PF+FKWW MVP
Sbjct: 636 PYHMLHGEVHCGTNVCRKPFSFKWWNMVP 664


>gi|122056685 peptidylarginine deiminase type I [Homo sapiens]
          Length = 663

 Score =  557 bits (1436), Expect = e-158
 Identities = 308/693 (44%), Positives = 427/693 (61%), Gaps = 37/693 (5%)

Query: 9   MSFQSIIHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDVANTVISEK 68
           M+ + ++ LSL  P HAVCV+G E  +D+    P+    F + GS  V + +       K
Sbjct: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60

Query: 69  ED-ATIWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLTGIEVSLE 127
           E      WPL       V + + S  +   KV V+Y+G  ED  +G +VLYLTG+++SLE
Sbjct: 61  EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 120

Query: 128 VDIYRNGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKVIFS-EEI 186
           VD  R G+V+ S     KK W WGP G+GAILLVNC+  D  +  E   T   + S  ++
Sbjct: 121 VDTGRTGKVKRSQGD--KKTWRWGPEGYGAILLVNCD-RDNHRSAEPDLTHSWLMSLADL 177

Query: 187 TNLSQMTLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDNS-STFELVLGPDQHAYT 245
            ++S M L+  GP  +   ++LVL+    +SK+ RV+  +  NS S ++ VLGP   +Y 
Sbjct: 178 QDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYE 237

Query: 246 LALLGNHLKETFYVEAIAFPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVFRVAPC 305
           +       +  FYVE + FP A+F GL+S SVSLV+     ++PE  L+ DTV FR+AP 
Sbjct: 238 VERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPG---TLPEVTLFTDTVGFRMAPW 294

Query: 306 VFIPCTQVPLEVYLCRELQLQG----FVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDEM 361
           +  P TQ P E+Y+CR +   G    F++ ++ L+ K+N ++    +  NR  RW+QDEM
Sbjct: 295 IMTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEM 354

Query: 362 AFCYTQAPHKTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLMV 421
            F Y +APHK+  ++ D+P+   L +FP K  L P  GY+ ++      +S+DS GNL V
Sbjct: 355 EFGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDV 414

Query: 422 SPPVKVQGKEYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGHV 481
           SPPV V G EYPLGR+LIGSSF P + GR M++ +R+FL AQQVQAPVELYSDWL  GHV
Sbjct: 415 SPPVTVGGTEYPLGRILIGSSF-PKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHV 473

Query: 482 DEFMCFIPTDDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNGR 541
           DEF+ F+PT D+    KGF LLLASPSAC KLF+EK++EGYG+A  FD L+        +
Sbjct: 474 DEFLTFVPTSDQ----KGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKH-------Q 522

Query: 542 EAKTIDQLLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIPS 601
             ++I+++LAD  L++ N + +KCI  NR++LK ELGL E DI++IPQLF L        
Sbjct: 523 AKRSINEMLADRHLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFL-------- 574

Query: 602 DQQPKRSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTFI 661
               K  +A  +FPD++ M+V+GK LGIPKP+GP I G CCLEEK+  LLEPLG  C FI
Sbjct: 575 ----KNFYAEAFFPDMVNMVVLGKYLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFI 630

Query: 662 NDFDCYLTEVGDICACANIRRVPFAFKWWKMVP 694
           +D+  Y    G+I    N+RR PF FKWW MVP
Sbjct: 631 DDYLSYHELQGEIHCGTNVRRKPFPFKWWNMVP 663


>gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]
          Length = 665

 Score =  538 bits (1385), Expect = e-153
 Identities = 303/686 (44%), Positives = 421/686 (61%), Gaps = 33/686 (4%)

Query: 15  IHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDVANTVISEK--EDAT 72
           + L   S V AV VLGT +  D+   AP   Q F++  S  V ++V     +E+   +  
Sbjct: 7   VRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEEVATNGK 66

Query: 73  IWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLTGIEVSLEVDIYR 132
             W LS  T   V M+  S    +DKV+V YY      P+  A L+LT IE+SL+VD  R
Sbjct: 67  QRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISLDVDADR 126

Query: 133 NGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKVIFSEEITNLSQM 192
           +G VE ++ K+A   W WGP G GAILLVNC+        ED + +KV   E++ ++SQM
Sbjct: 127 DGVVEKNNPKKAS--WTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKDMSQM 184

Query: 193 TLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDN-SSTFELVLGPDQHAYTLALLGN 251
            L  +GP  +   Y +VL+ S  +S K  V++ +       +  +LG  +  + +   G 
Sbjct: 185 ILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVKYTGG 244

Query: 252 HLKETFYVEAIAFPSAEFSGLISYSVSLVEE-SQDPSIPETVLYKDTVVFRVAPCVFIPC 310
             +  F+VE + FP   FSGL+S  VSL+E  +QD  IP T ++ DTV+FR+AP +  P 
Sbjct: 245 SAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQD--IPLTPIFTDTVIFRIAPWIMTPN 302

Query: 311 TQVPLEVYLCRELQLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDEMAFCYTQAPH 370
              P+ V++C       F+  V  L EK+N ++   ++  NR  RW+QDE+ F Y +APH
Sbjct: 303 ILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIEAPH 362

Query: 371 KTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLMVSPPVKVQGK 430
           K   ++LD+P+  +L +FP+K  L P  GY+ ++     V S+DS GNL VSPPV V GK
Sbjct: 363 KGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVNGK 422

Query: 431 EYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGHVDEFMCFIPT 490
            YPLGR+LIGSSF P + GR M+K +RDFL AQQVQAPVELYSDWL  GHVDEFM F+P 
Sbjct: 423 TYPLGRILIGSSF-PLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVPI 481

Query: 491 DDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNGREAK--TIDQ 548
                G K FLLL+AS SACYKLFREKQK+G+G+A++F  L        G  +K  TI++
Sbjct: 482 ----PGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGL-------GGMSSKRITINK 530

Query: 549 LLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIPSDQQPKRS 608
           +L++ESL ++N Y ++C+  NRDILK ELGL EQDII++P LF +++      D +    
Sbjct: 531 ILSNESLVQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDE------DHR---- 580

Query: 609 FARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTFINDFDCYL 668
            AR +FP+++ MIV+ K+LGIPKPFGPQ++  CCLE  +  LLEPLG +CTFI+D   Y 
Sbjct: 581 -ARAFFPNMVNMIVLDKDLGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYH 639

Query: 669 TEVGDICACANIRRVPFAFKWWKMVP 694
             +G++    N+RR PF FKWW MVP
Sbjct: 640 KFLGEVHCGTNVRRKPFTFKWWHMVP 665


>gi|13787217 FAT tumor suppressor 2 precursor [Homo sapiens]
          Length = 4349

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 11/64 (17%)

Query: 67   EKEDATIWW-----------PLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTA 115
            ++E A+ +W           PLS  T   +++T  + +      +V Y    EDAPVGT+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155

Query: 116  VLYL 119
            VL L
Sbjct: 1156 VLQL 1159


>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
          Length = 2817

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 40  CAPQKCQCFTIHGSGRVLIDVANTVISEKEDATIWWPLS-DPTYATVKMTSPSPSVDADK 98
           CA   CQ  T+  SG ++  + + ++SE E  T   P S DP  A+      + +V +D 
Sbjct: 662 CADSACQQNTVTSSGDLVAKLCDNIVSESESTTARQPSSQDPPDASHCEDPQAHTVTSDP 721

Query: 99  VSVT 102
           V  T
Sbjct: 722 VRDT 725


>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
          Length = 2813

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 40  CAPQKCQCFTIHGSGRVLIDVANTVISEKEDATIWWPLS-DPTYATVKMTSPSPSVDADK 98
           CA   CQ  T+  SG ++  + + ++SE E  T   P S DP  A+      + +V +D 
Sbjct: 662 CADSACQQNTVTSSGDLVAKLCDNIVSESESTTARQPSSQDPPDASHCEDPQAHTVTSDP 721

Query: 99  VSVT 102
           V  T
Sbjct: 722 VRDT 725


>gi|118498343 ATPase, Ca++ transporting, type 2C, member 2 [Homo
           sapiens]
          Length = 946

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query: 598 NIPSDQQPKRSFARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEK 646
           ++ ++ Q    F +    +++R   M  N GIP P  PQ +  C  EEK
Sbjct: 497 SLKTEDQEDIYFMKGALEEVIRYCTMYNNGGIPLPLTPQQRSFCLQEEK 545


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,072,211
Number of Sequences: 37866
Number of extensions: 1248929
Number of successful extensions: 2795
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2753
Number of HSP's gapped (non-prelim): 10
length of query: 694
length of database: 18,247,518
effective HSP length: 109
effective length of query: 585
effective length of database: 14,120,124
effective search space: 8260272540
effective search space used: 8260272540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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