Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239745569
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745569 PREDICTED: hypothetical protein XP_002344150 [Homo
sapiens]
(230 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745569 PREDICTED: hypothetical protein XP_002344150 [Homo ... 484 e-137
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 36 0.024
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 35 0.041
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 35 0.041
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 35 0.041
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 35 0.041
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 35 0.041
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 35 0.041
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 33 0.16
gi|42822882 fat-inducing transcript 1 [Homo sapiens] 32 0.46
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 31 0.78
gi|194272172 double homeobox, 4 [Homo sapiens] 31 0.78
gi|75677394 transcription factor 23 [Homo sapiens] 31 0.78
gi|194272217 double homeobox, 4-like [Homo sapiens] 31 0.78
gi|194272216 double homeobox, 4-like [Homo sapiens] 31 0.78
gi|194272215 double homeobox, 4-like [Homo sapiens] 31 0.78
gi|194272192 double homeobox, 4-like [Homo sapiens] 31 0.78
gi|4758464 glypican 5 [Homo sapiens] 30 1.7
gi|119120907 par-3 partitioning defective 3 homolog B isoform a ... 30 2.3
gi|119120903 par-3 partitioning defective 3 homolog B isoform c ... 30 2.3
gi|169211520 PREDICTED: hypothetical protein [Homo sapiens] 29 3.9
gi|125988400 leukocyte immunoglobulin-like receptor, subfamily B... 28 6.6
gi|5803066 leukocyte immunoglobulin-like receptor, subfamily A (... 28 8.6
>gi|239745569 PREDICTED: hypothetical protein XP_002344150 [Homo
sapiens]
Length = 230
Score = 484 bits (1247), Expect = e-137
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MLRWCGQPFASVQPHPWGQGGGSLLPFSRLLADSPLRLSTVHCSQPRSRQPPAVIGARQH 60
MLRWCGQPFASVQPHPWGQGGGSLLPFSRLLADSPLRLSTVHCSQPRSRQPPAVIGARQH
Sbjct: 1 MLRWCGQPFASVQPHPWGQGGGSLLPFSRLLADSPLRLSTVHCSQPRSRQPPAVIGARQH 60
Query: 61 CGHWDGVLASLLSPWLGFGFSRMNLLRRSVSELAWAAPYPSPVGTEAGSELRARSKDPCP 120
CGHWDGVLASLLSPWLGFGFSRMNLLRRSVSELAWAAPYPSPVGTEAGSELRARSKDPCP
Sbjct: 61 CGHWDGVLASLLSPWLGFGFSRMNLLRRSVSELAWAAPYPSPVGTEAGSELRARSKDPCP 120
Query: 121 IGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPLGLL 180
IGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPLGLL
Sbjct: 121 IGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPLGLL 180
Query: 181 GEPRNTLDVADLSLLTLGQPRRHTDFSSGYFSSRWGPLLEDFRNTSQHLR 230
GEPRNTLDVADLSLLTLGQPRRHTDFSSGYFSSRWGPLLEDFRNTSQHLR
Sbjct: 181 GEPRNTLDVADLSLLTLGQPRRHTDFSSGYFSSRWGPLLEDFRNTSQHLR 230
>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 422
Score = 36.2 bits (82), Expect = 0.024
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 56 GARQHCGHWDGVLASLLSPWLG-FGFSRMNLLRRSVSELAW-----AAPYPSPVGTEAGS 109
G Q H GVLA S W +G+ R V+ +AW AAP PV EA +
Sbjct: 287 GPAQAVPHGQGVLAPPASQWSPCWGWGR----GPQVAGVAWEPQAGAAPPRQPVPLEAST 342
Query: 110 ELRARSKDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISE 169
R P P + W P LL D + + L + P E G + + E
Sbjct: 343 RQRQMQGIPAPNQALQEPGRWSALPSGLLLDELLASQEFLQQVQPFRETEAPGDLQALEE 402
Query: 170 YDGHRLPL 177
PL
Sbjct: 403 ASSLEAPL 410
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.041
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAW-----AAPYPSPVGTEAGSELRARSKD 117
GVLA S SPW G+G V+ AW AAP P P +A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASARQGQMQGI 411
Query: 118 PCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPL 177
P P + A W P LL D + + L PLL E G E PL
Sbjct: 412 PAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPL 471
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.041
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAW-----AAPYPSPVGTEAGSELRARSKD 117
GVLA S SPW G+G V+ AW AAP P P +A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASARQGQMQGI 411
Query: 118 PCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPL 177
P P + A W P LL D + + L PLL E G E PL
Sbjct: 412 PAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPL 471
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.041
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAW-----AAPYPSPVGTEAGSELRARSKD 117
GVLA S SPW G+G V+ AW AAP P P +A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASARQGQMQGI 411
Query: 118 PCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPL 177
P P + A W P LL D + + L PLL E G E PL
Sbjct: 412 PAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPL 471
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.041
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAW-----AAPYPSPVGTEAGSELRARSKD 117
GVLA S SPW G+G V+ AW AAP P P +A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASARQGQMQGI 411
Query: 118 PCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPL 177
P P + A W P LL D + + L PLL E G E PL
Sbjct: 412 PAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPL 471
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.041
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAW-----AAPYPSPVGTEAGSELRARSKD 117
GVLA S SPW G+G V+ AW AAP P P +A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASARQGQMQGI 411
Query: 118 PCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPL 177
P P + A W P LL D + + L PLL E G E PL
Sbjct: 412 PAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPL 471
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.041
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAW-----AAPYPSPVGTEAGSELRARSKD 117
GVLA S SPW G+G V+ AW AAP P P +A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASARQGQMQGI 411
Query: 118 PCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPL 177
P P + A W P LL D + + L PLL E G E PL
Sbjct: 412 PAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPL 471
>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 483
Score = 33.5 bits (75), Expect = 0.16
Identities = 35/120 (29%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAWA-----APYPSPVGTEAGSELRARSKD 117
GVLA S SPW G+G V+ AW AP P P +A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGEAPPPQPAPPDASARQGQMQGI 411
Query: 118 PCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLPL 177
P P + A W P LL D + + L PLL E G E PL
Sbjct: 412 PAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPL 471
>gi|42822882 fat-inducing transcript 1 [Homo sapiens]
Length = 292
Score = 32.0 bits (71), Expect = 0.46
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 117 DPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRLP 176
+P P GL+LH+ ++ L +G TV + LL CL V ++Y H LP
Sbjct: 154 EPLPQGLLLHELPDRRSCLAAGHQWRGYTVSSHTFLLTFCCLLMAEEAAVFAKYLAHGLP 213
Query: 177 LG 178
G
Sbjct: 214 AG 215
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 31.2 bits (69), Expect = 0.78
Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 16/122 (13%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAWAA-------PYPSPVGTEAGSELRARS 115
GVLA S SPW G+G V+ AW P P+P A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASASARQGQMQ 411
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRL 175
P P + A W P LL D + + L PLL E G E
Sbjct: 412 GIPAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEA 471
Query: 176 PL 177
PL
Sbjct: 472 PL 473
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 31.2 bits (69), Expect = 0.78
Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 16/122 (13%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAWAA-------PYPSPVGTEAGSELRARS 115
GVLA S SPW G+G V+ AW P P+P A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASASARQGQMQ 411
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRL 175
P P + A W P LL D + + L PLL E G E
Sbjct: 412 GIPAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEA 471
Query: 176 PL 177
PL
Sbjct: 472 PL 473
>gi|75677394 transcription factor 23 [Homo sapiens]
Length = 214
Score = 31.2 bits (69), Expect = 0.78
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 44 SQPRSRQPPAVIGARQHCGHWDGVLASLLSPWLGFGFSRMNLLR------RSVSELAWAA 97
SQ ++R PPA+ G GH + L P SR++ R RS S W+
Sbjct: 2 SQRKARGPPAMPGV----GHSQTQAKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSR 57
Query: 98 PYPSPVGTEAGSELRARSK 116
P P GT AG RS+
Sbjct: 58 ATPGPRGTRAGGLALGRSE 76
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 31.2 bits (69), Expect = 0.78
Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 16/122 (13%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAWAA-------PYPSPVGTEAGSELRARS 115
GVLA S SPW G+G V+ AW P P+P A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASASARQGQMQ 411
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRL 175
P P + A W P LL D + + L PLL E G E
Sbjct: 412 GIPAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEA 471
Query: 176 PL 177
PL
Sbjct: 472 PL 473
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 31.2 bits (69), Expect = 0.78
Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 16/122 (13%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAWAA-------PYPSPVGTEAGSELRARS 115
GVLA S SPW G+G V+ AW P P+P A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASASARQGQMQ 411
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRL 175
P P + A W P LL D + + L PLL E G E
Sbjct: 412 GIPAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEA 471
Query: 176 PL 177
PL
Sbjct: 472 PL 473
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 31.2 bits (69), Expect = 0.78
Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 16/122 (13%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAWAA-------PYPSPVGTEAGSELRARS 115
GVLA S SPW G+G V+ AW P P+P A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASASARQGQMQ 411
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRL 175
P P + A W P LL D + + L PLL E G E
Sbjct: 412 GIPAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEA 471
Query: 176 PL 177
PL
Sbjct: 472 PL 473
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 31.2 bits (69), Expect = 0.78
Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 16/122 (13%)
Query: 66 GVLA---SLLSPWLGFGFSRMNLLRRSVSELAWAA-------PYPSPVGTEAGSELRARS 115
GVLA S SPW G+G V+ AW P P+P A +
Sbjct: 358 GVLAPPTSQGSPWWGWGRGPQ------VAGAAWEPQAGAAPPPQPAPPDASASARQGQMQ 411
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGEGTCRVISEYDGHRL 175
P P + A W P LL D + + L PLL E G E
Sbjct: 412 GIPAPSQALQEPAPWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEA 471
Query: 176 PL 177
PL
Sbjct: 472 PL 473
>gi|4758464 glypican 5 [Homo sapiens]
Length = 572
Score = 30.0 bits (66), Expect = 1.7
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 8 PFASVQPHPWGQGGGSLLPFSRLLADSPLRLSTVHCSQ--PRSRQPPAVIGARQHCGHWD 65
PF ++ GQ G SLLP L L + ++ + S++ + Q+C H
Sbjct: 203 PFGNIPQRVMGQMGRSLLPSRTFLQALNLGIEVINTTDYLHFSKECSRALLKMQYCPHCQ 262
Query: 66 GVLASLLSPWLGFGFSRMNLLRRSVSELAWAAPY 99
G+ +L P +G+ +N++R ++ +A P+
Sbjct: 263 GL--ALTKPCMGY---CLNVMRGCLAHMAELNPH 291
>gi|119120907 par-3 partitioning defective 3 homolog B isoform a
[Homo sapiens]
Length = 1104
Score = 29.6 bits (65), Expect = 2.3
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQ---GGTVDALVNLLPLLCLEGEGTCRVISEYDG 172
K+ P G + Q +L +G+ G T + LV +L +GE VI+ +G
Sbjct: 413 KNILPKGAAIKDGRLQSGDRILEVNGRDVTGRTQEELVAMLRST-KQGETASLVIARQEG 471
Query: 173 HRLPLGLLGEPRNTLDVADLSLLTLGQ 199
H LP L GEP D LSL T Q
Sbjct: 472 HFLPRELKGEP----DCCALSLETSEQ 494
>gi|119120903 par-3 partitioning defective 3 homolog B isoform c
[Homo sapiens]
Length = 1136
Score = 29.6 bits (65), Expect = 2.3
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 116 KDPCPIGLILHKASWQQDPLVLLCDGQ---GGTVDALVNLLPLLCLEGEGTCRVISEYDG 172
K+ P G + Q +L +G+ G T + LV +L +GE VI+ +G
Sbjct: 413 KNILPKGAAIKDGRLQSGDRILEVNGRDVTGRTQEELVAMLRST-KQGETASLVIARQEG 471
Query: 173 HRLPLGLLGEPRNTLDVADLSLLTLGQ 199
H LP L GEP D LSL T Q
Sbjct: 472 HFLPRELKGEP----DCCALSLETSEQ 494
>gi|169211520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 312
Score = 28.9 bits (63), Expect = 3.9
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 102 PVGTEAGSELRARSKDPCPIGLILHKASWQQDPLVLLCDGQGGTVDALVNLLPLLCLEGE 161
P GT AG +LRAR L L KAS+ + V L+ LP + LEG
Sbjct: 166 PAGTAAGGKLRARLLRLPDCSLALGKASYS------VWSPTHFPVPPLLGRLPCVLLEGP 219
Query: 162 GTCR 165
C+
Sbjct: 220 ARCQ 223
>gi|125988400 leukocyte immunoglobulin-like receptor, subfamily B,
member 2 isoform 1 [Homo sapiens]
Length = 598
Score = 28.1 bits (61), Expect = 6.6
Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 13/118 (11%)
Query: 6 GQPFASVQPHPWGQGGGSLL-------PFSRLL------ADSPLRLSTVHCSQPRSRQPP 52
G PF SVQP P G ++ F L AD+PLRL ++H + P
Sbjct: 323 GTPFISVQPGPTVASGENVTLLCQSWRQFHTFLLTKAGAADAPLRLRSIHEYPKYQAEFP 382
Query: 53 AVIGARQHCGHWDGVLASLLSPWLGFGFSRMNLLRRSVSELAWAAPYPSPVGTEAGSE 110
H G + + P+L S L S + + P P+ T AG E
Sbjct: 383 MSPVTSAHAGTYRCYGSLNSDPYLLSHPSEPLELVVSGPSMGSSPPPTGPISTPAGPE 440
>gi|5803066 leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 1 [Homo sapiens]
Length = 489
Score = 27.7 bits (60), Expect = 8.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
Query: 6 GQPFASVQPHPWGQGGGSLL-------PFSRLL------ADSPLRLSTVH 42
G+PF SV P P G ++ PF L AD+PLRL ++H
Sbjct: 324 GRPFISVHPGPTVASGENVTLLCQSWGPFHTFLLTKAGAADAPLRLRSIH 373
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.140 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,644,717
Number of Sequences: 37866
Number of extensions: 532684
Number of successful extensions: 1141
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1128
Number of HSP's gapped (non-prelim): 25
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.