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Search of human proteins with 116734668
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116734668 molybdenum cofactor synthesis-step 1 protein
isoform 4 [Homo sapiens]
(385 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116734668 molybdenum cofactor synthesis-step 1 protein isofor... 763 0.0
gi|22027536 molybdenum cofactor synthesis-step 1 protein isoform... 691 0.0
gi|116734664 molybdenum cofactor synthesis-step 1 protein isofor... 686 0.0
gi|116734666 molybdenum cofactor synthesis-step 1 protein isofor... 658 0.0
gi|19923667 radical S-adenosyl methionine domain containing 2 [H... 35 0.087
gi|38202224 discs large-associated protein 2 [Homo sapiens] 31 1.6
gi|103472031 family with sequence similarity 62 (C2 domain conta... 31 2.1
gi|4507887 vascular endothelial growth factor B [Homo sapiens] 30 2.8
gi|7662170 AMPK-related protein kinase 5 [Homo sapiens] 30 4.8
gi|116174754 phospholipase A2, group IVD [Homo sapiens] 29 6.3
gi|215490093 ATPase, (Na+)/K+ transporting, beta 4 polypeptide i... 29 6.3
gi|6912256 ATPase, (Na+)/K+ transporting, beta 4 polypeptide iso... 29 6.3
gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo s... 29 8.2
gi|116805342 human immunodeficiency virus type I enhancer bindin... 29 8.2
gi|62865631 solute carrier family 27 (fatty acid transporter), m... 29 8.2
gi|13325055 solute carrier family 27 (fatty acid transporter), m... 29 8.2
>gi|116734668 molybdenum cofactor synthesis-step 1 protein isoform 4
[Homo sapiens]
Length = 385
Score = 763 bits (1971), Expect = 0.0
Identities = 385/385 (100%), Positives = 385/385 (100%)
Query: 1 MAARPLSRMLRRLLRSSARSCSSGAPVTQPCPGESARAASEEVSRRRQFLREHAAPFSAF 60
MAARPLSRMLRRLLRSSARSCSSGAPVTQPCPGESARAASEEVSRRRQFLREHAAPFSAF
Sbjct: 1 MAARPLSRMLRRLLRSSARSCSSGAPVTQPCPGESARAASEEVSRRRQFLREHAAPFSAF 60
Query: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID
Sbjct: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
Query: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD
Sbjct: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
Query: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP
Sbjct: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
Query: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ
Sbjct: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
Query: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG
Sbjct: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
Query: 361 RKKRQHAGMFSISQMKNRPMILIGG 385
RKKRQHAGMFSISQMKNRPMILIGG
Sbjct: 361 RKKRQHAGMFSISQMKNRPMILIGG 385
>gi|22027536 molybdenum cofactor synthesis-step 1 protein isoform 1
[Homo sapiens]
Length = 385
Score = 691 bits (1783), Expect = 0.0
Identities = 353/368 (95%), Positives = 357/368 (97%), Gaps = 7/368 (1%)
Query: 21 CSSGAPVTQ-PC--PGESARAASEEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
C+S P ++ PC PG S S+EVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT
Sbjct: 22 CASSQPGSRGPCFLPGLS----SQEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
Query: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD
Sbjct: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
Query: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH
Sbjct: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
Query: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN
Sbjct: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
Query: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR
Sbjct: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
Query: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN 377
LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN
Sbjct: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN 377
Query: 378 RPMILIGG 385
RPMILIGG
Sbjct: 378 RPMILIGG 385
>gi|116734664 molybdenum cofactor synthesis-step 1 protein isoform 2
[Homo sapiens]
Length = 636
Score = 686 bits (1771), Expect = 0.0
Identities = 351/366 (95%), Positives = 355/366 (96%), Gaps = 7/366 (1%)
Query: 21 CSSGAPVTQ-PC--PGESARAASEEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
C+S P ++ PC PG S S+EVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT
Sbjct: 22 CASSQPGSRGPCFLPGLS----SQEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
Query: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD
Sbjct: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
Query: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH
Sbjct: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
Query: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN
Sbjct: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
Query: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR
Sbjct: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
Query: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN 377
LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN
Sbjct: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN 377
Query: 378 RPMILI 383
RPMILI
Sbjct: 378 RPMILI 383
>gi|116734666 molybdenum cofactor synthesis-step 1 protein isoform 3
[Homo sapiens]
Length = 620
Score = 658 bits (1698), Expect = 0.0
Identities = 336/353 (95%), Positives = 341/353 (96%), Gaps = 7/353 (1%)
Query: 21 CSSGAPVTQ-PC--PGESARAASEEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
C+S P ++ PC PG S S+EVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT
Sbjct: 22 CASSQPGSRGPCFLPGLS----SQEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
Query: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD
Sbjct: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
Query: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH
Sbjct: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
Query: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN
Sbjct: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
Query: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR
Sbjct: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
Query: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMF 370
LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHA +F
Sbjct: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAELF 370
>gi|19923667 radical S-adenosyl methionine domain containing 2 [Homo
sapiens]
Length = 361
Score = 35.4 bits (80), Expect = 0.087
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 77 TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKE-GIDKIRLTGGEPLI--RP 133
T +CN +C +C T K + + E L +KE G++KI +GGEP + R
Sbjct: 80 TRQCNYKCGFCFH------TAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRG 133
Query: 134 DVVDIVAQLQRLE-GLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVR 192
+ + + + ++E L ++ + +NG + Q L + IS D+ I R
Sbjct: 134 EYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGR 193
Query: 193 RKGFHKVMEGIHK 205
+G +E + K
Sbjct: 194 GQGKKNHVENLQK 206
>gi|38202224 discs large-associated protein 2 [Homo sapiens]
Length = 975
Score = 31.2 bits (69), Expect = 1.6
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Query: 26 PVTQPCPGESARAASEE------VSRRRQFL-REHAAPFSAFLTDSFGRQHSYLRISLTE 78
P +P PG S+ +S++ R L R H P + D+ L + ++
Sbjct: 205 PEGKPRPGMSSWWSSDDNLDSDSTYRTPSVLNRHHLGPVAHCYPDALQSPFGDLSLKTSK 264
Query: 79 KCN-LRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPD 134
N ++C C EG+ LTP A L TL KE K L +PL+ D
Sbjct: 265 SNNDVKCSAC---EGLALTPDAKYLKRSSWSTLTVSQAKEAYRKSSLNLDKPLLHQD 318
>gi|103472031 family with sequence similarity 62 (C2 domain
containing), member C [Homo sapiens]
Length = 886
Score = 30.8 bits (68), Expect = 2.1
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 314 TCNRLRITADGNLKVCLFGNSEVSLR-DHLRAGASEQEL---LRII 355
TCNR R+T D L++C G+ E+S+ ++AG + +L LR+I
Sbjct: 181 TCNRRRVTVD--LQICYIGDCEISVELQKIQAGVNGIQLQGTLRVI 224
>gi|4507887 vascular endothelial growth factor B [Homo sapiens]
Length = 207
Score = 30.4 bits (67), Expect = 2.8
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 6 LSRMLRRLLRSSARSCSSG-APVTQP-CPGESARAAS--EEVSRRRQFLREHAAPFSAFL 61
+S +LRRLL ++ + APV+QP PG + S + +R RE P + L
Sbjct: 1 MSPLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVEL 60
Query: 62 TDSFGRQHSYLRISLTEKCNL--RCQYCMPEEGVPLTPKANLLTTEEILTL 110
+ +Q L C RC C P++G+ P +IL +
Sbjct: 61 MGTVAKQ-------LVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMI 104
>gi|7662170 AMPK-related protein kinase 5 [Homo sapiens]
Length = 661
Score = 29.6 bits (65), Expect = 4.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 24 GAPVTQPCPGESARAASEEVSRRRQFLREHAAPFSAFLTD 63
G+ + P P + AR S +S RR+ + +H++ +SA D
Sbjct: 498 GSSIPSPSPPDPARVTSHSLSCRRKGILKHSSKYSAGTMD 537
>gi|116174754 phospholipase A2, group IVD [Homo sapiens]
Length = 818
Score = 29.3 bits (64), Expect = 6.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 200 MEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPF 251
+ G A+E G NP+ + + N E LDF E P +V F++Y F
Sbjct: 445 LSGQRAALERGQNPLPLYLSLNVKENNLETLDFKEWVEFSPYEVGFLKYGAF 496
>gi|215490093 ATPase, (Na+)/K+ transporting, beta 4 polypeptide
isoform A [Homo sapiens]
Length = 357
Score = 29.3 bits (64), Expect = 6.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 208 ELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEY 248
ELG +PVKV+C V RG +E+++ + E D+R+ Y
Sbjct: 260 ELG-DPVKVSCKVQRG-DENDIRSISYYPESASFDLRYYPY 298
>gi|6912256 ATPase, (Na+)/K+ transporting, beta 4 polypeptide
isoform B [Homo sapiens]
Length = 353
Score = 29.3 bits (64), Expect = 6.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 208 ELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEY 248
ELG +PVKV+C V RG +E+++ + E D+R+ Y
Sbjct: 256 ELG-DPVKVSCKVQRG-DENDIRSISYYPESASFDLRYYPY 294
>gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo
sapiens]
Length = 375
Score = 28.9 bits (63), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 60 FLTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVP 94
FL F + H RI + L CQ+ +P++G P
Sbjct: 12 FLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSP 46
>gi|116805342 human immunodeficiency virus type I enhancer binding
protein 1 [Homo sapiens]
Length = 2718
Score = 28.9 bits (63), Expect = 8.2
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 153 VTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFHKVMEGIHKAIE 208
+T N + + PQ GL +NI+L TL+P+ + V +G ++ KA E
Sbjct: 2525 LTANPSSQSSPAPQAHIPGLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACE 2580
>gi|62865631 solute carrier family 27 (fatty acid transporter),
member 6 [Homo sapiens]
Length = 619
Score = 28.9 bits (63), Expect = 8.2
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 30/111 (27%)
Query: 127 GEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAI----NISLD-- 180
GE + +V D++ L ++ GV +G +AG+++I N SLD
Sbjct: 488 GENVATTEVADVIGMLDFIQEANVYGVAISGYE--------GRAGMASIILKPNTSLDLE 539
Query: 181 -------TLVPA-------KFEFIVRRKGFHKVMEGIHKAIELGYNPVKVN 217
T +PA + + + G K+++ H+ +E G+NP+K++
Sbjct: 540 KVYEQVVTFLPAYACPRFLRIQEKMEATGTFKLLK--HQLVEDGFNPLKIS 588
>gi|13325055 solute carrier family 27 (fatty acid transporter),
member 6 [Homo sapiens]
Length = 619
Score = 28.9 bits (63), Expect = 8.2
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 30/111 (27%)
Query: 127 GEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAI----NISLD-- 180
GE + +V D++ L ++ GV +G +AG+++I N SLD
Sbjct: 488 GENVATTEVADVIGMLDFIQEANVYGVAISGYE--------GRAGMASIILKPNTSLDLE 539
Query: 181 -------TLVPA-------KFEFIVRRKGFHKVMEGIHKAIELGYNPVKVN 217
T +PA + + + G K+++ H+ +E G+NP+K++
Sbjct: 540 KVYEQVVTFLPAYACPRFLRIQEKMEATGTFKLLK--HQLVEDGFNPLKIS 588
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,709,996
Number of Sequences: 37866
Number of extensions: 593833
Number of successful extensions: 1584
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1575
Number of HSP's gapped (non-prelim): 16
length of query: 385
length of database: 18,247,518
effective HSP length: 104
effective length of query: 281
effective length of database: 14,309,454
effective search space: 4020956574
effective search space used: 4020956574
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.