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Search of human proteins with 116734664
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116734664 molybdenum cofactor synthesis-step 1 protein
isoform 2 [Homo sapiens]
(636 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116734664 molybdenum cofactor synthesis-step 1 protein isofor... 1265 0.0
gi|116734666 molybdenum cofactor synthesis-step 1 protein isofor... 1224 0.0
gi|22027536 molybdenum cofactor synthesis-step 1 protein isoform... 768 0.0
gi|116734668 molybdenum cofactor synthesis-step 1 protein isofor... 686 0.0
gi|19923667 radical S-adenosyl methionine domain containing 2 [H... 35 0.16
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 34 0.36
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 34 0.36
gi|103472031 family with sequence similarity 62 (C2 domain conta... 31 4.0
gi|38202224 discs large-associated protein 2 [Homo sapiens] 31 4.0
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 30 5.2
gi|239754590 PREDICTED: similar to hCG1779533 [Homo sapiens] 30 5.2
>gi|116734664 molybdenum cofactor synthesis-step 1 protein isoform 2
[Homo sapiens]
Length = 636
Score = 1265 bits (3273), Expect = 0.0
Identities = 636/636 (100%), Positives = 636/636 (100%)
Query: 1 MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF 60
MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF
Sbjct: 1 MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF 60
Query: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID
Sbjct: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
Query: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD
Sbjct: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
Query: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP
Sbjct: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
Query: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ
Sbjct: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
Query: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG
Sbjct: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
Query: 361 RKKRQHAGMFSISQMKNRPMILIELFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQV 420
RKKRQHAGMFSISQMKNRPMILIELFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQV
Sbjct: 361 RKKRQHAGMFSISQMKNRPMILIELFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQV 420
Query: 421 ATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSE 480
ATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSE
Sbjct: 421 ATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSE 480
Query: 481 QLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAG 540
QLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAG
Sbjct: 481 QLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAG 540
Query: 541 VQAAKVTSQLIPLCHHVALSHIQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVA 600
VQAAKVTSQLIPLCHHVALSHIQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVA
Sbjct: 541 VQAAKVTSQLIPLCHHVALSHIQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVA 600
Query: 601 ALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHRA 636
ALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHRA
Sbjct: 601 ALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHRA 636
>gi|116734666 molybdenum cofactor synthesis-step 1 protein isoform 3
[Homo sapiens]
Length = 620
Score = 1224 bits (3167), Expect = 0.0
Identities = 620/636 (97%), Positives = 620/636 (97%), Gaps = 16/636 (2%)
Query: 1 MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF 60
MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF
Sbjct: 1 MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF 60
Query: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID
Sbjct: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
Query: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD
Sbjct: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
Query: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP
Sbjct: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
Query: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ
Sbjct: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
Query: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG
Sbjct: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
Query: 361 RKKRQHAGMFSISQMKNRPMILIELFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQV 420
RKKRQHA ELFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQV
Sbjct: 361 RKKRQHA----------------ELFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQV 404
Query: 421 ATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSE 480
ATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSE
Sbjct: 405 ATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSE 464
Query: 481 QLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAG 540
QLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAG
Sbjct: 465 QLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAG 524
Query: 541 VQAAKVTSQLIPLCHHVALSHIQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVA 600
VQAAKVTSQLIPLCHHVALSHIQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVA
Sbjct: 525 VQAAKVTSQLIPLCHHVALSHIQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVA 584
Query: 601 ALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHRA 636
ALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHRA
Sbjct: 585 ALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHRA 620
>gi|22027536 molybdenum cofactor synthesis-step 1 protein isoform 1
[Homo sapiens]
Length = 385
Score = 768 bits (1983), Expect = 0.0
Identities = 383/383 (100%), Positives = 383/383 (100%)
Query: 1 MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF 60
MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF
Sbjct: 1 MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF 60
Query: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID
Sbjct: 61 LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID 120
Query: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD
Sbjct: 121 KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD 180
Query: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP
Sbjct: 181 TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP 240
Query: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ
Sbjct: 241 LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ 300
Query: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG
Sbjct: 301 ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG 360
Query: 361 RKKRQHAGMFSISQMKNRPMILI 383
RKKRQHAGMFSISQMKNRPMILI
Sbjct: 361 RKKRQHAGMFSISQMKNRPMILI 383
>gi|116734668 molybdenum cofactor synthesis-step 1 protein isoform 4
[Homo sapiens]
Length = 385
Score = 686 bits (1771), Expect = 0.0
Identities = 351/366 (95%), Positives = 355/366 (96%), Gaps = 7/366 (1%)
Query: 22 CASSQPGSRGPCFLPGLS----SQEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
C+S P ++ PC PG S S+EVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT
Sbjct: 21 CSSGAPVTQ-PC--PGESARAASEEVSRRRQFLREHAAPFSAFLTDSFGRQHSYLRISLT 77
Query: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD
Sbjct: 78 EKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIRPDVVD 137
Query: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH
Sbjct: 138 IVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFH 197
Query: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN
Sbjct: 198 KVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWN 257
Query: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR
Sbjct: 258 FKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNR 317
Query: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN 377
LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN
Sbjct: 318 LRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKN 377
Query: 378 RPMILI 383
RPMILI
Sbjct: 378 RPMILI 383
>gi|19923667 radical S-adenosyl methionine domain containing 2 [Homo
sapiens]
Length = 361
Score = 35.4 bits (80), Expect = 0.16
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 77 TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKE-GIDKIRLTGGEPLI--RP 133
T +CN +C +C T K + + E L +KE G++KI +GGEP + R
Sbjct: 80 TRQCNYKCGFCFH------TAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRG 133
Query: 134 DVVDIVAQLQRLE-GLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVR 192
+ + + + ++E L ++ + +NG + Q L + IS D+ I R
Sbjct: 134 EYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGR 193
Query: 193 RKGFHKVMEGIHK 205
+G +E + K
Sbjct: 194 GQGKKNHVENLQK 206
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 34.3 bits (77), Expect = 0.36
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 389 FPNSPPANPSIFSWDPLHVQGLRPRMSFSSQVATLWKGCRVPQTPPLAQQRLGSGSFQRH 448
F +SP I S +HV G R LWKGC+V TP +Q L QRH
Sbjct: 272 FNSSPDLADHIRS---IHVDGQR-----GGVFVCLWKGCKVYNTPSTSQSWL-----QRH 318
Query: 449 YTSRADSDANSKCLSPGSWASAAPSG 474
+ + D KC+ G AS A G
Sbjct: 319 MLTHS-GDKPFKCVVGGCNASFASQG 343
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 34.3 bits (77), Expect = 0.36
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 389 FPNSPPANPSIFSWDPLHVQGLRPRMSFSSQVATLWKGCRVPQTPPLAQQRLGSGSFQRH 448
F +SP I S +HV G R LWKGC+V TP +Q L QRH
Sbjct: 272 FNSSPDLADHIRS---IHVDGQR-----GGVFVCLWKGCKVYNTPSTSQSWL-----QRH 318
Query: 449 YTSRADSDANSKCLSPGSWASAAPSG 474
+ + D KC+ G AS A G
Sbjct: 319 MLTHS-GDKPFKCVVGGCNASFASQG 343
>gi|103472031 family with sequence similarity 62 (C2 domain
containing), member C [Homo sapiens]
Length = 886
Score = 30.8 bits (68), Expect = 4.0
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 314 TCNRLRITADGNLKVCLFGNSEVSLR-DHLRAGASEQEL---LRII 355
TCNR R+T D L++C G+ E+S+ ++AG + +L LR+I
Sbjct: 181 TCNRRRVTVD--LQICYIGDCEISVELQKIQAGVNGIQLQGTLRVI 224
>gi|38202224 discs large-associated protein 2 [Homo sapiens]
Length = 975
Score = 30.8 bits (68), Expect = 4.0
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 51 REHAAPFSAFLTDSFGRQHSYLRISLTEKCN-LRCQYCMPEEGVPLTPKANLLTTEEILT 109
R H P + D+ L + ++ N ++C C EG+ LTP A L T
Sbjct: 237 RHHLGPVAHCYPDALQSPFGDLSLKTSKSNNDVKCSAC---EGLALTPDAKYLKRSSWST 293
Query: 110 LARLFVKEGIDKIRLTGGEPLIRPD 134
L KE K L +PL+ D
Sbjct: 294 LTVSQAKEAYRKSSLNLDKPLLHQD 318
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 30.4 bits (67), Expect = 5.2
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 400 FSWDPLHVQGLRPRMSFSSQVA-TLWKGC-RVPQTPPLAQQRLGSGSFQRHYTSR----- 452
++WD +GL + ++ TL G R P +PP + +GS ++ + R
Sbjct: 938 WTWDTPSGRGLAEGTPTAGKLGPTLGAGTTRSPGSPPTLRVHGDTGSPRKPWPERRPPRP 997
Query: 453 ADSDANSKCLSPGSWASAAPSGPQLTSEQLTHVDSEGRAAMVDVGRKPDT 502
A + SPG AS P GP LTS+ + PDT
Sbjct: 998 AATRTAPPTPSPGPSASPGPPGPALTSDSSRELTPHSALTSEATSDAPDT 1047
>gi|239754590 PREDICTED: similar to hCG1779533 [Homo sapiens]
Length = 248
Score = 30.4 bits (67), Expect = 5.2
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 397 PSIFSWDPLHVQGLRPRMSFSSQVATLWKGCRVPQTPPLAQ-QRLGSGSFQRHYTSRADS 455
PS SW P+ Q L P S + L+ G P L + Q S +FQ H
Sbjct: 103 PSSDSWQPVQAQ-LLPYNGLFSPSSCLFAGGSCPAPTGLCRPQTASSQAFQAHLLPPNGL 161
Query: 456 DANSKCL---SPG-SWASAAPS 473
D S C+ SPG ++AS PS
Sbjct: 162 DRPSSCVTMASPGPAFASQRPS 183
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,131,465
Number of Sequences: 37866
Number of extensions: 1071855
Number of successful extensions: 3680
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3673
Number of HSP's gapped (non-prelim): 12
length of query: 636
length of database: 18,247,518
effective HSP length: 109
effective length of query: 527
effective length of database: 14,120,124
effective search space: 7441305348
effective search space used: 7441305348
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.